ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:01869:02075

Extra

PDB:
ATOM 1 O3' A A1868 102.158 93.362 46.545 1.00 68.64 O
ATOM 2 P C A1869 102.672 92.299 45.457 1.00 71.02 P
ATOM 3 OP1 C A1869 101.468 91.847 44.708 1.00 71.06 O
ATOM 4 OP2 C A1869 103.541 91.295 46.143 1.00 69.83 O
ATOM 5 O5' C A1869 103.579 93.163 44.473 1.00 70.90 O
ATOM 6 C5' C A1869 102.991 94.150 43.605 1.00 71.68 C
ATOM 7 C4' C A1869 104.065 94.865 42.825 1.00 71.69 C
ATOM 8 O4' C A1869 104.938 95.552 43.755 1.00 71.31 O
ATOM 9 C3' C A1869 105.005 93.978 42.023 1.00 72.51 C
ATOM 10 O3' C A1869 104.442 93.607 40.765 1.00 74.50 O
ATOM 11 C2' C A1869 106.239 94.860 41.891 1.00 72.01 C
ATOM 12 O2' C A1869 106.099 95.875 40.913 1.00 71.42 O
ATOM 13 C1' C A1869 106.270 95.517 43.271 1.00 70.99 C
ATOM 14 N1 C A1869 107.102 94.793 44.248 1.00 68.92 N
ATOM 15 C2 C A1869 108.475 95.069 44.290 1.00 68.39 C
ATOM 16 O2 C A1869 108.946 95.909 43.499 1.00 67.67 O
ATOM 17 N3 C A1869 109.252 94.413 45.188 1.00 67.84 N
ATOM 18 C4 C A1869 108.706 93.513 46.014 1.00 67.15 C
ATOM 19 N4 C A1869 109.512 92.885 46.876 1.00 65.54 N
ATOM 20 C5 C A1869 107.309 93.216 45.990 1.00 66.19 C
ATOM 21 C6 C A1869 106.554 93.871 45.101 1.00 66.76 C
ATOM 22 P A A1870 104.808 92.180 40.116 1.00 75.09 P
ATOM 23 OP1 A A1870 104.216 92.163 38.756 1.00 76.07 O
ATOM 24 OP2 A A1870 104.474 91.094 41.074 1.00 74.92 O
ATOM 25 O5' A A1870 106.387 92.238 39.954 1.00 74.94 O
TER

ATOM 1 O3' G B2074 113.306 99.994 48.462 1.00 63.42 O
ATOM 2 P U B2075 113.480 100.577 46.974 1.00 62.74 P
ATOM 3 OP1 U B2075 114.540 99.768 46.344 1.00 65.96 O
ATOM 4 OP2 U B2075 113.629 102.053 47.042 1.00 62.69 O
ATOM 5 O5' U B2075 112.104 100.229 46.252 1.00 61.64 O
ATOM 6 C5' U B2075 111.711 98.866 46.038 1.00 61.37 C
ATOM 7 C4' U B2075 110.345 98.809 45.399 1.00 62.28 C
ATOM 8 O4' U B2075 109.351 99.334 46.315 1.00 61.77 O
ATOM 9 C3' U B2075 110.176 99.655 44.151 1.00 62.72 C
ATOM 10 O3' U B2075 110.666 98.986 43.003 1.00 63.89 O
ATOM 11 C2' U B2075 108.671 99.858 44.105 1.00 62.38 C
ATOM 12 O2' U B2075 107.987 98.714 43.645 1.00 64.39 O
ATOM 13 C1' U B2075 108.358 100.046 45.587 1.00 61.64 C
ATOM 14 N1 U B2075 108.397 101.459 46.001 1.00 61.66 N
ATOM 15 C2 U B2075 107.310 102.264 45.684 1.00 61.71 C
ATOM 16 O2 U B2075 106.333 101.857 45.072 1.00 61.79 O
ATOM 17 N3 U B2075 107.415 103.564 46.108 1.00 60.85 N
ATOM 18 C4 U B2075 108.466 104.129 46.798 1.00 61.65 C
ATOM 19 O4 U B2075 108.405 105.311 47.132 1.00 63.70 O
ATOM 20 C5 U B2075 109.545 103.240 47.081 1.00 61.53 C
ATOM 21 C6 U B2075 109.477 101.971 46.685 1.00 61.33 C
ATOM 22 P C B2076 111.262 99.840 41.783 1.00 64.84 P
ATOM 23 OP1 C B2076 111.948 98.862 40.899 1.00 65.11 O
ATOM 24 OP2 C B2076 112.025 100.993 42.340 1.00 64.57 O
ATOM 25 O5' C B2076 109.972 100.394 41.026 1.00 62.61 O
TER

Atoms:
C2: (108.475,95.069,44.290)
OP1: (101.468,91.847,44.708)
OP2: (103.541,91.295,46.143)
C4: (108.706,93.513,46.014)
O5': (103.579,93.163,44.473)
C3': (105.005,93.978,42.023)
C1': (106.270,95.517,43.271)
O4': (104.938,95.552,43.755)
C5': (102.991,94.150,43.605)
P: (102.672,92.299,45.457)
O2: (108.946,95.909,43.499)
C4': (104.065,94.865,42.825)
C2': (106.239,94.860,41.891)
O2': (106.099,95.875,40.913)
N1: (107.102,94.793,44.248)
N3: (109.252,94.413,45.188)
N4: (109.512,92.885,46.876)
C6: (106.554,93.871,45.101)
C5: (107.309,93.216,45.990)
O3': (104.442,93.607,40.765)
C4: (108.466,104.129,46.798)
N3: (107.415,103.564,46.108)
OP1: (114.540,99.768,46.344)
OP2: (113.629,102.053,47.042)
C2: (107.310,102.264,45.684)
C1': (108.358,100.046,45.587)
C3': (110.176,99.655,44.151)
O5': (112.104,100.229,46.252)
O4': (109.351,99.334,46.315)
C5': (111.711,98.866,46.038)
P: (113.480,100.577,46.974)
C4': (110.345,98.809,45.399)
C2': (108.671,99.858,44.105)
O2': (107.987,98.714,43.645)
N1: (108.397,101.459,46.001)
O4: (108.405,105.311,47.132)
O2: (106.333,101.857,45.072)
C6: (109.477,101.971,46.685)
C5: (109.545,103.240,47.081)
O3': (110.666,98.986,43.003)
Image (generated by PyMOL):
PyMOL image
show in jmol