Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1ZDK:S9:S8
Extra
PDB:
ATOM 1 O3' A A 8 -14.755 104.390 -0.311 0.50100.19 O
ATOM 2 P U A 9 -15.280 105.898 -0.130 0.50 99.97 P
ATOM 3 OP1 U A 9 -16.725 105.868 -0.534 0.50 99.36 O
ATOM 4 OP2 U A 9 -14.334 106.868 -0.790 0.50 98.29 O
ATOM 5 O5' U A 9 -15.165 106.153 1.440 0.50101.65 O
ATOM 6 C5' U A 9 -16.105 107.005 2.109 0.50105.27 C
ATOM 7 C4' U A 9 -16.506 106.384 3.417 0.50108.04 C
ATOM 8 O4' U A 9 -17.247 105.150 3.167 0.50110.00 O
ATOM 9 C3' U A 9 -15.320 106.008 4.304 0.50109.43 C
ATOM 10 O3' U A 9 -15.707 106.198 5.667 0.50110.03 O
ATOM 11 C2' U A 9 -15.186 104.509 4.065 0.50110.51 C
ATOM 12 O2' U A 9 -14.569 103.851 5.150 0.50111.04 O
ATOM 13 C1' U A 9 -16.658 104.110 3.923 0.50112.20 C
ATOM 14 N1 U A 9 -16.968 102.798 3.319 0.50114.91 N
ATOM 15 C2 U A 9 -17.953 102.005 3.958 0.50115.59 C
ATOM 16 O2 U A 9 -18.603 102.387 4.928 0.50115.87 O
ATOM 17 N3 U A 9 -18.144 100.754 3.408 0.50116.20 N
ATOM 18 C4 U A 9 -17.481 100.210 2.311 0.50116.30 C
ATOM 19 O4 U A 9 -17.655 99.013 2.027 0.50116.04 O
ATOM 20 C5 U A 9 -16.521 101.103 1.680 0.50115.90 C
ATOM 21 C6 U A 9 -16.306 102.335 2.194 0.50115.49 C
ATOM 22 P C A 10 -14.803 107.105 6.663 0.50110.65 P
ATOM 23 OP1 C A 10 -15.124 106.568 8.040 0.50111.28 O
ATOM 24 OP2 C A 10 -15.060 108.573 6.366 0.50109.76 O
ATOM 25 O5' C A 10 -13.279 106.710 6.335 0.50106.18 O
TER
ATOM 1 O3' G B 7 -11.106 103.117 -4.814 0.50 91.76 O
ATOM 2 P A B 8 -11.421 104.560 -4.170 0.50 91.46 P
ATOM 3 OP1 A B 8 -12.524 105.237 -4.923 0.50 90.92 O
ATOM 4 OP2 A B 8 -10.083 105.253 -4.017 0.50 90.33 O
ATOM 5 O5' A B 8 -11.926 104.205 -2.700 0.50 93.24 O
ATOM 6 C5' A B 8 -12.816 103.092 -2.484 0.50 96.73 C
ATOM 7 C4' A B 8 -13.019 102.863 -1.004 0.50 98.91 C
ATOM 8 O4' A B 8 -11.797 102.372 -0.382 0.50 99.76 O
ATOM 9 C3' A B 8 -13.367 104.118 -0.222 0.50 99.93 C
ATOM 10 O3' A B 8 -14.755 104.390 -0.311 0.50100.19 O
ATOM 11 C2' A B 8 -12.914 103.786 1.198 0.50100.26 C
ATOM 12 O2' A B 8 -13.871 103.058 1.948 0.50100.13 O
ATOM 13 C1' A B 8 -11.693 102.903 0.933 0.50100.43 C
ATOM 14 N9 A B 8 -10.437 103.643 1.033 0.50101.14 N
ATOM 15 C8 A B 8 -9.722 104.218 0.008 0.50102.09 C
ATOM 16 N7 A B 8 -8.592 104.779 0.395 0.50102.61 N
ATOM 17 C5 A B 8 -8.573 104.562 1.767 0.50101.97 C
ATOM 18 C6 A B 8 -7.644 104.899 2.743 0.50101.78 C
ATOM 19 N6 A B 8 -6.494 105.515 2.456 0.50101.96 N
ATOM 20 N1 A B 8 -7.926 104.571 4.034 0.50101.61 N
ATOM 21 C2 A B 8 -9.078 103.916 4.286 0.50101.02 C
ATOM 22 N3 A B 8 -10.030 103.527 3.437 0.50100.91 N
ATOM 23 C4 A B 8 -9.714 103.885 2.179 0.50101.40 C
ATOM 24 P U B 9 -15.280 105.898 -0.130 0.50 99.97 P
ATOM 25 OP1 U B 9 -16.725 105.868 -0.534 0.50 99.36 O
ATOM 26 OP2 U B 9 -14.334 106.868 -0.790 0.50 98.29 O
ATOM 27 O5' U B 9 -15.165 106.153 1.440 0.50101.65 O
TER
ATOM 2 P U A 9 -15.280 105.898 -0.130 0.50 99.97 P
ATOM 3 OP1 U A 9 -16.725 105.868 -0.534 0.50 99.36 O
ATOM 4 OP2 U A 9 -14.334 106.868 -0.790 0.50 98.29 O
ATOM 5 O5' U A 9 -15.165 106.153 1.440 0.50101.65 O
ATOM 6 C5' U A 9 -16.105 107.005 2.109 0.50105.27 C
ATOM 7 C4' U A 9 -16.506 106.384 3.417 0.50108.04 C
ATOM 8 O4' U A 9 -17.247 105.150 3.167 0.50110.00 O
ATOM 9 C3' U A 9 -15.320 106.008 4.304 0.50109.43 C
ATOM 10 O3' U A 9 -15.707 106.198 5.667 0.50110.03 O
ATOM 11 C2' U A 9 -15.186 104.509 4.065 0.50110.51 C
ATOM 12 O2' U A 9 -14.569 103.851 5.150 0.50111.04 O
ATOM 13 C1' U A 9 -16.658 104.110 3.923 0.50112.20 C
ATOM 14 N1 U A 9 -16.968 102.798 3.319 0.50114.91 N
ATOM 15 C2 U A 9 -17.953 102.005 3.958 0.50115.59 C
ATOM 16 O2 U A 9 -18.603 102.387 4.928 0.50115.87 O
ATOM 17 N3 U A 9 -18.144 100.754 3.408 0.50116.20 N
ATOM 18 C4 U A 9 -17.481 100.210 2.311 0.50116.30 C
ATOM 19 O4 U A 9 -17.655 99.013 2.027 0.50116.04 O
ATOM 20 C5 U A 9 -16.521 101.103 1.680 0.50115.90 C
ATOM 21 C6 U A 9 -16.306 102.335 2.194 0.50115.49 C
ATOM 22 P C A 10 -14.803 107.105 6.663 0.50110.65 P
ATOM 23 OP1 C A 10 -15.124 106.568 8.040 0.50111.28 O
ATOM 24 OP2 C A 10 -15.060 108.573 6.366 0.50109.76 O
ATOM 25 O5' C A 10 -13.279 106.710 6.335 0.50106.18 O
TER
ATOM 1 O3' G B 7 -11.106 103.117 -4.814 0.50 91.76 O
ATOM 2 P A B 8 -11.421 104.560 -4.170 0.50 91.46 P
ATOM 3 OP1 A B 8 -12.524 105.237 -4.923 0.50 90.92 O
ATOM 4 OP2 A B 8 -10.083 105.253 -4.017 0.50 90.33 O
ATOM 5 O5' A B 8 -11.926 104.205 -2.700 0.50 93.24 O
ATOM 6 C5' A B 8 -12.816 103.092 -2.484 0.50 96.73 C
ATOM 7 C4' A B 8 -13.019 102.863 -1.004 0.50 98.91 C
ATOM 8 O4' A B 8 -11.797 102.372 -0.382 0.50 99.76 O
ATOM 9 C3' A B 8 -13.367 104.118 -0.222 0.50 99.93 C
ATOM 10 O3' A B 8 -14.755 104.390 -0.311 0.50100.19 O
ATOM 11 C2' A B 8 -12.914 103.786 1.198 0.50100.26 C
ATOM 12 O2' A B 8 -13.871 103.058 1.948 0.50100.13 O
ATOM 13 C1' A B 8 -11.693 102.903 0.933 0.50100.43 C
ATOM 14 N9 A B 8 -10.437 103.643 1.033 0.50101.14 N
ATOM 15 C8 A B 8 -9.722 104.218 0.008 0.50102.09 C
ATOM 16 N7 A B 8 -8.592 104.779 0.395 0.50102.61 N
ATOM 17 C5 A B 8 -8.573 104.562 1.767 0.50101.97 C
ATOM 18 C6 A B 8 -7.644 104.899 2.743 0.50101.78 C
ATOM 19 N6 A B 8 -6.494 105.515 2.456 0.50101.96 N
ATOM 20 N1 A B 8 -7.926 104.571 4.034 0.50101.61 N
ATOM 21 C2 A B 8 -9.078 103.916 4.286 0.50101.02 C
ATOM 22 N3 A B 8 -10.030 103.527 3.437 0.50100.91 N
ATOM 23 C4 A B 8 -9.714 103.885 2.179 0.50101.40 C
ATOM 24 P U B 9 -15.280 105.898 -0.130 0.50 99.97 P
ATOM 25 OP1 U B 9 -16.725 105.868 -0.534 0.50 99.36 O
ATOM 26 OP2 U B 9 -14.334 106.868 -0.790 0.50 98.29 O
ATOM 27 O5' U B 9 -15.165 106.153 1.440 0.50101.65 O
TER
Atoms:
C4: (-17.481,100.210,2.311)
N3: (-18.144,100.754,3.408)
OP1: (-16.725,105.868,-0.534)
OP2: (-14.334,106.868,-0.790)
C2: (-17.953,102.005,3.958)
C1': (-16.658,104.110,3.923)
C3': (-15.320,106.008,4.304)
O5': (-15.165,106.153,1.440)
O4': (-17.247,105.150,3.167)
C5': (-16.105,107.005,2.109)
P: (-15.280,105.898,-0.130)
C4': (-16.506,106.384,3.417)
C2': (-15.186,104.509,4.065)
O2': (-14.569,103.851,5.150)
N1: (-16.968,102.798,3.319)
O4: (-17.655,99.013,2.027)
O2: (-18.603,102.387,4.928)
C6: (-16.306,102.335,2.194)
C5: (-16.521,101.103,1.680)
O3': (-15.707,106.198,5.667)
N3: (-18.144,100.754,3.408)
OP1: (-16.725,105.868,-0.534)
OP2: (-14.334,106.868,-0.790)
C2: (-17.953,102.005,3.958)
C1': (-16.658,104.110,3.923)
C3': (-15.320,106.008,4.304)
O5': (-15.165,106.153,1.440)
O4': (-17.247,105.150,3.167)
C5': (-16.105,107.005,2.109)
P: (-15.280,105.898,-0.130)
C4': (-16.506,106.384,3.417)
C2': (-15.186,104.509,4.065)
O2': (-14.569,103.851,5.150)
N1: (-16.968,102.798,3.319)
O4: (-17.655,99.013,2.027)
O2: (-18.603,102.387,4.928)
C6: (-16.306,102.335,2.194)
C5: (-16.521,101.103,1.680)
O3': (-15.707,106.198,5.667)
OP1: (-12.524,105.237,-4.923)
OP2: (-10.083,105.253,-4.017)
C3': (-13.367,104.118,-0.222)
C1': (-11.693,102.903,0.933)
C5': (-12.816,103.092,-2.484)
O4': (-11.797,102.372,-0.382)
C8: (-9.722,104.218,0.008)
O2': (-13.871,103.058,1.948)
C6: (-7.644,104.899,2.743)
C5: (-8.573,104.562,1.767)
C4: (-9.714,103.885,2.179)
P: (-11.421,104.560,-4.170)
C4': (-13.019,102.863,-1.004)
C2': (-12.914,103.786,1.198)
C2: (-9.078,103.916,4.286)
N1: (-7.926,104.571,4.034)
N3: (-10.030,103.527,3.437)
N6: (-6.494,105.515,2.456)
N7: (-8.592,104.779,0.395)
N9: (-10.437,103.643,1.033)
O5': (-11.926,104.205,-2.700)
O3': (-14.755,104.390,-0.311)
OP2: (-10.083,105.253,-4.017)
C3': (-13.367,104.118,-0.222)
C1': (-11.693,102.903,0.933)
C5': (-12.816,103.092,-2.484)
O4': (-11.797,102.372,-0.382)
C8: (-9.722,104.218,0.008)
O2': (-13.871,103.058,1.948)
C6: (-7.644,104.899,2.743)
C5: (-8.573,104.562,1.767)
C4: (-9.714,103.885,2.179)
P: (-11.421,104.560,-4.170)
C4': (-13.019,102.863,-1.004)
C2': (-12.914,103.786,1.198)
C2: (-9.078,103.916,4.286)
N1: (-7.926,104.571,4.034)
N3: (-10.030,103.527,3.437)
N6: (-6.494,105.515,2.456)
N7: (-8.592,104.779,0.395)
N9: (-10.437,103.643,1.033)
O5': (-11.926,104.205,-2.700)
O3': (-14.755,104.390,-0.311)
Image (generated by PyMOL):