Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01869:02075
Extra
PDB:
ATOM 1 O3' A A1868 101.919 93.167 46.104 1.00 65.48 O
ATOM 2 P C A1869 102.435 92.108 45.007 1.00 67.89 P
ATOM 3 OP1 C A1869 101.277 91.769 44.139 1.00 67.34 O
ATOM 4 OP2 C A1869 103.173 91.016 45.708 1.00 67.36 O
ATOM 5 O5' C A1869 103.460 92.952 44.127 1.00 68.54 O
ATOM 6 C5' C A1869 102.989 94.021 43.282 1.00 69.74 C
ATOM 7 C4' C A1869 104.143 94.679 42.571 1.00 70.10 C
ATOM 8 O4' C A1869 105.021 95.284 43.550 1.00 69.81 O
ATOM 9 C3' C A1869 105.052 93.751 41.783 1.00 71.53 C
ATOM 10 O3' C A1869 104.499 93.458 40.500 1.00 74.18 O
ATOM 11 C2' C A1869 106.342 94.560 41.713 1.00 70.93 C
ATOM 12 O2' C A1869 106.298 95.603 40.759 1.00 71.98 O
ATOM 13 C1' C A1869 106.363 95.200 43.101 1.00 69.48 C
ATOM 14 N1 C A1869 107.145 94.441 44.092 1.00 67.93 N
ATOM 15 C2 C A1869 108.517 94.712 44.220 1.00 67.88 C
ATOM 16 O2 C A1869 109.032 95.586 43.495 1.00 68.53 O
ATOM 17 N3 C A1869 109.244 94.018 45.128 1.00 66.75 N
ATOM 18 C4 C A1869 108.653 93.088 45.886 1.00 65.88 C
ATOM 19 N4 C A1869 109.410 92.420 46.761 1.00 65.71 N
ATOM 20 C5 C A1869 107.262 92.799 45.780 1.00 65.09 C
ATOM 21 C6 C A1869 106.553 93.490 44.879 1.00 65.85 C
ATOM 22 P A A1870 104.603 91.964 39.902 1.00 75.18 P
ATOM 23 OP1 A A1870 103.800 91.951 38.655 1.00 74.70 O
ATOM 24 OP2 A A1870 104.324 90.964 40.969 1.00 74.40 O
ATOM 25 O5' A A1870 106.132 91.828 39.498 1.00 74.44 O
TER
ATOM 1 O3' G B2074 112.991 99.724 48.081 1.00 57.28 O
ATOM 2 P U B2075 113.239 100.392 46.633 1.00 58.67 P
ATOM 3 OP1 U B2075 114.369 99.664 46.012 1.00 58.89 O
ATOM 4 OP2 U B2075 113.325 101.871 46.798 1.00 57.55 O
ATOM 5 O5' U B2075 111.926 100.029 45.805 1.00 57.39 O
ATOM 6 C5' U B2075 111.518 98.661 45.651 1.00 57.28 C
ATOM 7 C4' U B2075 110.116 98.584 45.100 1.00 57.99 C
ATOM 8 O4' U B2075 109.164 99.132 46.045 1.00 58.85 O
ATOM 9 C3' U B2075 109.868 99.367 43.829 1.00 57.69 C
ATOM 10 O3' U B2075 110.291 98.614 42.714 1.00 59.02 O
ATOM 11 C2' U B2075 108.357 99.532 43.847 1.00 58.29 C
ATOM 12 O2' U B2075 107.687 98.356 43.440 1.00 57.90 O
ATOM 13 C1' U B2075 108.103 99.760 45.338 1.00 58.98 C
ATOM 14 N1 U B2075 108.070 101.184 45.709 1.00 59.42 N
ATOM 15 C2 U B2075 106.949 101.923 45.361 1.00 59.18 C
ATOM 16 O2 U B2075 105.995 101.448 44.759 1.00 58.30 O
ATOM 17 N3 U B2075 106.987 103.241 45.745 1.00 59.48 N
ATOM 18 C4 U B2075 108.005 103.883 46.421 1.00 60.12 C
ATOM 19 O4 U B2075 107.894 105.078 46.693 1.00 61.89 O
ATOM 20 C5 U B2075 109.122 103.057 46.742 1.00 60.00 C
ATOM 21 C6 U B2075 109.119 101.772 46.385 1.00 59.72 C
ATOM 22 P C B2076 110.821 99.366 41.404 1.00 60.40 P
ATOM 23 OP1 C B2076 111.392 98.287 40.550 1.00 60.18 O
ATOM 24 OP2 C B2076 111.673 100.520 41.816 1.00 59.50 O
ATOM 25 O5' C B2076 109.503 99.931 40.707 1.00 57.89 O
TER
ATOM 2 P C A1869 102.435 92.108 45.007 1.00 67.89 P
ATOM 3 OP1 C A1869 101.277 91.769 44.139 1.00 67.34 O
ATOM 4 OP2 C A1869 103.173 91.016 45.708 1.00 67.36 O
ATOM 5 O5' C A1869 103.460 92.952 44.127 1.00 68.54 O
ATOM 6 C5' C A1869 102.989 94.021 43.282 1.00 69.74 C
ATOM 7 C4' C A1869 104.143 94.679 42.571 1.00 70.10 C
ATOM 8 O4' C A1869 105.021 95.284 43.550 1.00 69.81 O
ATOM 9 C3' C A1869 105.052 93.751 41.783 1.00 71.53 C
ATOM 10 O3' C A1869 104.499 93.458 40.500 1.00 74.18 O
ATOM 11 C2' C A1869 106.342 94.560 41.713 1.00 70.93 C
ATOM 12 O2' C A1869 106.298 95.603 40.759 1.00 71.98 O
ATOM 13 C1' C A1869 106.363 95.200 43.101 1.00 69.48 C
ATOM 14 N1 C A1869 107.145 94.441 44.092 1.00 67.93 N
ATOM 15 C2 C A1869 108.517 94.712 44.220 1.00 67.88 C
ATOM 16 O2 C A1869 109.032 95.586 43.495 1.00 68.53 O
ATOM 17 N3 C A1869 109.244 94.018 45.128 1.00 66.75 N
ATOM 18 C4 C A1869 108.653 93.088 45.886 1.00 65.88 C
ATOM 19 N4 C A1869 109.410 92.420 46.761 1.00 65.71 N
ATOM 20 C5 C A1869 107.262 92.799 45.780 1.00 65.09 C
ATOM 21 C6 C A1869 106.553 93.490 44.879 1.00 65.85 C
ATOM 22 P A A1870 104.603 91.964 39.902 1.00 75.18 P
ATOM 23 OP1 A A1870 103.800 91.951 38.655 1.00 74.70 O
ATOM 24 OP2 A A1870 104.324 90.964 40.969 1.00 74.40 O
ATOM 25 O5' A A1870 106.132 91.828 39.498 1.00 74.44 O
TER
ATOM 1 O3' G B2074 112.991 99.724 48.081 1.00 57.28 O
ATOM 2 P U B2075 113.239 100.392 46.633 1.00 58.67 P
ATOM 3 OP1 U B2075 114.369 99.664 46.012 1.00 58.89 O
ATOM 4 OP2 U B2075 113.325 101.871 46.798 1.00 57.55 O
ATOM 5 O5' U B2075 111.926 100.029 45.805 1.00 57.39 O
ATOM 6 C5' U B2075 111.518 98.661 45.651 1.00 57.28 C
ATOM 7 C4' U B2075 110.116 98.584 45.100 1.00 57.99 C
ATOM 8 O4' U B2075 109.164 99.132 46.045 1.00 58.85 O
ATOM 9 C3' U B2075 109.868 99.367 43.829 1.00 57.69 C
ATOM 10 O3' U B2075 110.291 98.614 42.714 1.00 59.02 O
ATOM 11 C2' U B2075 108.357 99.532 43.847 1.00 58.29 C
ATOM 12 O2' U B2075 107.687 98.356 43.440 1.00 57.90 O
ATOM 13 C1' U B2075 108.103 99.760 45.338 1.00 58.98 C
ATOM 14 N1 U B2075 108.070 101.184 45.709 1.00 59.42 N
ATOM 15 C2 U B2075 106.949 101.923 45.361 1.00 59.18 C
ATOM 16 O2 U B2075 105.995 101.448 44.759 1.00 58.30 O
ATOM 17 N3 U B2075 106.987 103.241 45.745 1.00 59.48 N
ATOM 18 C4 U B2075 108.005 103.883 46.421 1.00 60.12 C
ATOM 19 O4 U B2075 107.894 105.078 46.693 1.00 61.89 O
ATOM 20 C5 U B2075 109.122 103.057 46.742 1.00 60.00 C
ATOM 21 C6 U B2075 109.119 101.772 46.385 1.00 59.72 C
ATOM 22 P C B2076 110.821 99.366 41.404 1.00 60.40 P
ATOM 23 OP1 C B2076 111.392 98.287 40.550 1.00 60.18 O
ATOM 24 OP2 C B2076 111.673 100.520 41.816 1.00 59.50 O
ATOM 25 O5' C B2076 109.503 99.931 40.707 1.00 57.89 O
TER
Atoms:
C2: (108.517,94.712,44.220)
OP1: (101.277,91.769,44.139)
OP2: (103.173,91.016,45.708)
C4: (108.653,93.088,45.886)
O5': (103.460,92.952,44.127)
C3': (105.052,93.751,41.783)
C1': (106.363,95.200,43.101)
O4': (105.021,95.284,43.550)
C5': (102.989,94.021,43.282)
P: (102.435,92.108,45.007)
O2: (109.032,95.586,43.495)
C4': (104.143,94.679,42.571)
C2': (106.342,94.560,41.713)
O2': (106.298,95.603,40.759)
N1: (107.145,94.441,44.092)
N3: (109.244,94.018,45.128)
N4: (109.410,92.420,46.761)
C6: (106.553,93.490,44.879)
C5: (107.262,92.799,45.780)
O3': (104.499,93.458,40.500)
OP1: (101.277,91.769,44.139)
OP2: (103.173,91.016,45.708)
C4: (108.653,93.088,45.886)
O5': (103.460,92.952,44.127)
C3': (105.052,93.751,41.783)
C1': (106.363,95.200,43.101)
O4': (105.021,95.284,43.550)
C5': (102.989,94.021,43.282)
P: (102.435,92.108,45.007)
O2: (109.032,95.586,43.495)
C4': (104.143,94.679,42.571)
C2': (106.342,94.560,41.713)
O2': (106.298,95.603,40.759)
N1: (107.145,94.441,44.092)
N3: (109.244,94.018,45.128)
N4: (109.410,92.420,46.761)
C6: (106.553,93.490,44.879)
C5: (107.262,92.799,45.780)
O3': (104.499,93.458,40.500)
C4: (108.005,103.883,46.421)
N3: (106.987,103.241,45.745)
OP1: (114.369,99.664,46.012)
OP2: (113.325,101.871,46.798)
C2: (106.949,101.923,45.361)
C1': (108.103,99.760,45.338)
C3': (109.868,99.367,43.829)
O5': (111.926,100.029,45.805)
O4': (109.164,99.132,46.045)
C5': (111.518,98.661,45.651)
P: (113.239,100.392,46.633)
C4': (110.116,98.584,45.100)
C2': (108.357,99.532,43.847)
O2': (107.687,98.356,43.440)
N1: (108.070,101.184,45.709)
O4: (107.894,105.078,46.693)
O2: (105.995,101.448,44.759)
C6: (109.119,101.772,46.385)
C5: (109.122,103.057,46.742)
O3': (110.291,98.614,42.714)
N3: (106.987,103.241,45.745)
OP1: (114.369,99.664,46.012)
OP2: (113.325,101.871,46.798)
C2: (106.949,101.923,45.361)
C1': (108.103,99.760,45.338)
C3': (109.868,99.367,43.829)
O5': (111.926,100.029,45.805)
O4': (109.164,99.132,46.045)
C5': (111.518,98.661,45.651)
P: (113.239,100.392,46.633)
C4': (110.116,98.584,45.100)
C2': (108.357,99.532,43.847)
O2': (107.687,98.356,43.440)
N1: (108.070,101.184,45.709)
O4: (107.894,105.078,46.693)
O2: (105.995,101.448,44.759)
C6: (109.119,101.772,46.385)
C5: (109.122,103.057,46.742)
O3': (110.291,98.614,42.714)
Image (generated by PyMOL):