Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1G:Y13:Y21
Extra
PDB:
ATOM 1 O3' C A 12 -114.286 -9.642 16.012 1.00 73.51 O
ATOM 2 P A A 13 -114.977 -10.885 16.757 1.00102.28 P
ATOM 3 OP1 A A 13 -113.917 -11.512 17.582 1.00104.88 O
ATOM 4 OP2 A A 13 -115.687 -11.705 15.748 1.00 93.62 O
ATOM 5 O5' A A 13 -116.089 -10.222 17.707 1.00 84.36 O
ATOM 6 C5' A A 13 -115.690 -9.691 18.969 1.00 89.64 C
ATOM 7 C4' A A 13 -116.631 -8.660 19.591 1.00 96.56 C
ATOM 8 O4' A A 13 -117.416 -7.925 18.618 1.00 94.41 O
ATOM 9 C3' A A 13 -117.717 -9.183 20.516 1.00 90.13 C
ATOM 10 O3' A A 13 -117.189 -9.644 21.736 1.00 82.31 O
ATOM 11 C2' A A 13 -118.493 -7.894 20.729 1.00 90.35 C
ATOM 12 O2' A A 13 -117.837 -7.015 21.619 1.00 74.78 O
ATOM 13 C1' A A 13 -118.507 -7.337 19.309 1.00 93.11 C
ATOM 14 N9 A A 13 -119.742 -7.686 18.618 1.00 93.23 N
ATOM 15 C8 A A 13 -119.860 -8.317 17.412 1.00 89.73 C
ATOM 16 N7 A A 13 -121.105 -8.504 17.042 1.00 89.29 N
ATOM 17 C5 A A 13 -121.853 -7.967 18.072 1.00 87.55 C
ATOM 18 C6 A A 13 -123.240 -7.855 18.276 1.00 90.28 C
ATOM 19 N6 A A 13 -124.141 -8.309 17.401 1.00 87.65 N
ATOM 20 N1 A A 13 -123.663 -7.262 19.412 1.00 88.76 N
ATOM 21 C2 A A 13 -122.747 -6.817 20.278 1.00 86.35 C
ATOM 22 N3 A A 13 -121.418 -6.863 20.193 1.00 85.35 N
ATOM 23 C4 A A 13 -121.030 -7.459 19.054 1.00 88.73 C
ATOM 24 P G A 14 -117.703 -11.054 22.273 1.00 97.15 P
ATOM 25 OP1 G A 14 -117.097 -11.297 23.595 1.00 81.42 O
ATOM 26 OP2 G A 14 -117.547 -12.047 21.186 1.00 93.35 O
ATOM 27 O5' G A 14 -119.261 -10.794 22.474 1.00 97.61 O
TER
ATOM 1 O3' U B 20 -133.311 -6.091 22.311 1.00176.66 O
ATOM 2 P A B 21 -133.202 -6.398 20.743 1.00146.76 P
ATOM 3 OP1 A B 21 -133.975 -5.360 20.025 1.00140.09 O
ATOM 4 OP2 A B 21 -133.533 -7.828 20.525 1.00109.42 O
ATOM 5 O5' A B 21 -131.648 -6.145 20.444 1.00124.46 O
ATOM 6 C5' A B 21 -130.620 -6.691 21.261 1.00107.10 C
ATOM 7 C4' A B 21 -129.373 -6.869 20.431 1.00102.49 C
ATOM 8 O4' A B 21 -129.533 -8.014 19.570 1.00 90.98 O
ATOM 9 C3' A B 21 -129.112 -5.740 19.451 1.00110.67 C
ATOM 10 O3' A B 21 -128.497 -4.639 20.127 1.00113.77 O
ATOM 11 C2' A B 21 -128.176 -6.416 18.448 1.00102.09 C
ATOM 12 O2' A B 21 -126.815 -6.312 18.820 1.00105.99 O
ATOM 13 C1' A B 21 -128.582 -7.885 18.532 1.00100.68 C
ATOM 14 N9 A B 21 -129.111 -8.462 17.301 1.00 99.19 N
ATOM 15 C8 A B 21 -130.418 -8.654 16.972 1.00101.85 C
ATOM 16 N7 A B 21 -130.587 -9.214 15.796 1.00101.60 N
ATOM 17 C5 A B 21 -129.302 -9.408 15.324 1.00 93.60 C
ATOM 18 C6 A B 21 -128.794 -9.960 14.133 1.00104.85 C
ATOM 19 N6 A B 21 -129.555 -10.443 13.152 1.00117.38 N
ATOM 20 N1 A B 21 -127.461 -10.000 13.977 1.00106.44 N
ATOM 21 C2 A B 21 -126.693 -9.520 14.956 1.00105.56 C
ATOM 22 N3 A B 21 -127.051 -8.979 16.118 1.00100.43 N
ATOM 23 C4 A B 21 -128.383 -8.950 16.241 1.00 97.19 C
ATOM 24 P G B 22 -129.026 -3.142 19.896 1.00107.34 P
ATOM 25 OP1 G B 22 -129.580 -2.689 21.193 1.00 97.22 O
ATOM 26 OP2 G B 22 -129.861 -3.125 18.671 1.00 96.42 O
ATOM 27 O5' G B 22 -127.704 -2.288 19.589 1.00 95.44 O
TER
ATOM 2 P A A 13 -114.977 -10.885 16.757 1.00102.28 P
ATOM 3 OP1 A A 13 -113.917 -11.512 17.582 1.00104.88 O
ATOM 4 OP2 A A 13 -115.687 -11.705 15.748 1.00 93.62 O
ATOM 5 O5' A A 13 -116.089 -10.222 17.707 1.00 84.36 O
ATOM 6 C5' A A 13 -115.690 -9.691 18.969 1.00 89.64 C
ATOM 7 C4' A A 13 -116.631 -8.660 19.591 1.00 96.56 C
ATOM 8 O4' A A 13 -117.416 -7.925 18.618 1.00 94.41 O
ATOM 9 C3' A A 13 -117.717 -9.183 20.516 1.00 90.13 C
ATOM 10 O3' A A 13 -117.189 -9.644 21.736 1.00 82.31 O
ATOM 11 C2' A A 13 -118.493 -7.894 20.729 1.00 90.35 C
ATOM 12 O2' A A 13 -117.837 -7.015 21.619 1.00 74.78 O
ATOM 13 C1' A A 13 -118.507 -7.337 19.309 1.00 93.11 C
ATOM 14 N9 A A 13 -119.742 -7.686 18.618 1.00 93.23 N
ATOM 15 C8 A A 13 -119.860 -8.317 17.412 1.00 89.73 C
ATOM 16 N7 A A 13 -121.105 -8.504 17.042 1.00 89.29 N
ATOM 17 C5 A A 13 -121.853 -7.967 18.072 1.00 87.55 C
ATOM 18 C6 A A 13 -123.240 -7.855 18.276 1.00 90.28 C
ATOM 19 N6 A A 13 -124.141 -8.309 17.401 1.00 87.65 N
ATOM 20 N1 A A 13 -123.663 -7.262 19.412 1.00 88.76 N
ATOM 21 C2 A A 13 -122.747 -6.817 20.278 1.00 86.35 C
ATOM 22 N3 A A 13 -121.418 -6.863 20.193 1.00 85.35 N
ATOM 23 C4 A A 13 -121.030 -7.459 19.054 1.00 88.73 C
ATOM 24 P G A 14 -117.703 -11.054 22.273 1.00 97.15 P
ATOM 25 OP1 G A 14 -117.097 -11.297 23.595 1.00 81.42 O
ATOM 26 OP2 G A 14 -117.547 -12.047 21.186 1.00 93.35 O
ATOM 27 O5' G A 14 -119.261 -10.794 22.474 1.00 97.61 O
TER
ATOM 1 O3' U B 20 -133.311 -6.091 22.311 1.00176.66 O
ATOM 2 P A B 21 -133.202 -6.398 20.743 1.00146.76 P
ATOM 3 OP1 A B 21 -133.975 -5.360 20.025 1.00140.09 O
ATOM 4 OP2 A B 21 -133.533 -7.828 20.525 1.00109.42 O
ATOM 5 O5' A B 21 -131.648 -6.145 20.444 1.00124.46 O
ATOM 6 C5' A B 21 -130.620 -6.691 21.261 1.00107.10 C
ATOM 7 C4' A B 21 -129.373 -6.869 20.431 1.00102.49 C
ATOM 8 O4' A B 21 -129.533 -8.014 19.570 1.00 90.98 O
ATOM 9 C3' A B 21 -129.112 -5.740 19.451 1.00110.67 C
ATOM 10 O3' A B 21 -128.497 -4.639 20.127 1.00113.77 O
ATOM 11 C2' A B 21 -128.176 -6.416 18.448 1.00102.09 C
ATOM 12 O2' A B 21 -126.815 -6.312 18.820 1.00105.99 O
ATOM 13 C1' A B 21 -128.582 -7.885 18.532 1.00100.68 C
ATOM 14 N9 A B 21 -129.111 -8.462 17.301 1.00 99.19 N
ATOM 15 C8 A B 21 -130.418 -8.654 16.972 1.00101.85 C
ATOM 16 N7 A B 21 -130.587 -9.214 15.796 1.00101.60 N
ATOM 17 C5 A B 21 -129.302 -9.408 15.324 1.00 93.60 C
ATOM 18 C6 A B 21 -128.794 -9.960 14.133 1.00104.85 C
ATOM 19 N6 A B 21 -129.555 -10.443 13.152 1.00117.38 N
ATOM 20 N1 A B 21 -127.461 -10.000 13.977 1.00106.44 N
ATOM 21 C2 A B 21 -126.693 -9.520 14.956 1.00105.56 C
ATOM 22 N3 A B 21 -127.051 -8.979 16.118 1.00100.43 N
ATOM 23 C4 A B 21 -128.383 -8.950 16.241 1.00 97.19 C
ATOM 24 P G B 22 -129.026 -3.142 19.896 1.00107.34 P
ATOM 25 OP1 G B 22 -129.580 -2.689 21.193 1.00 97.22 O
ATOM 26 OP2 G B 22 -129.861 -3.125 18.671 1.00 96.42 O
ATOM 27 O5' G B 22 -127.704 -2.288 19.589 1.00 95.44 O
TER
Atoms:
OP1: (-113.917,-11.512,17.582)
OP2: (-115.687,-11.705,15.748)
C3': (-117.717,-9.183,20.516)
C1': (-118.507,-7.337,19.309)
C5': (-115.690,-9.691,18.969)
O4': (-117.416,-7.925,18.618)
C8: (-119.860,-8.317,17.412)
O2': (-117.837,-7.015,21.619)
C6: (-123.240,-7.855,18.276)
C5: (-121.853,-7.967,18.072)
C4: (-121.030,-7.459,19.054)
P: (-114.977,-10.885,16.757)
C4': (-116.631,-8.660,19.591)
C2': (-118.493,-7.894,20.729)
C2: (-122.747,-6.817,20.278)
N1: (-123.663,-7.262,19.412)
N3: (-121.418,-6.863,20.193)
N6: (-124.141,-8.309,17.401)
N7: (-121.105,-8.504,17.042)
N9: (-119.742,-7.686,18.618)
O5': (-116.089,-10.222,17.707)
O3': (-117.189,-9.644,21.736)
OP2: (-115.687,-11.705,15.748)
C3': (-117.717,-9.183,20.516)
C1': (-118.507,-7.337,19.309)
C5': (-115.690,-9.691,18.969)
O4': (-117.416,-7.925,18.618)
C8: (-119.860,-8.317,17.412)
O2': (-117.837,-7.015,21.619)
C6: (-123.240,-7.855,18.276)
C5: (-121.853,-7.967,18.072)
C4: (-121.030,-7.459,19.054)
P: (-114.977,-10.885,16.757)
C4': (-116.631,-8.660,19.591)
C2': (-118.493,-7.894,20.729)
C2: (-122.747,-6.817,20.278)
N1: (-123.663,-7.262,19.412)
N3: (-121.418,-6.863,20.193)
N6: (-124.141,-8.309,17.401)
N7: (-121.105,-8.504,17.042)
N9: (-119.742,-7.686,18.618)
O5': (-116.089,-10.222,17.707)
O3': (-117.189,-9.644,21.736)
OP1: (-133.975,-5.360,20.025)
OP2: (-133.533,-7.828,20.525)
C3': (-129.112,-5.740,19.451)
C1': (-128.582,-7.885,18.532)
C5': (-130.620,-6.691,21.261)
O4': (-129.533,-8.014,19.570)
C8: (-130.418,-8.654,16.972)
O2': (-126.815,-6.312,18.820)
C6: (-128.794,-9.960,14.133)
C5: (-129.302,-9.408,15.324)
C4: (-128.383,-8.950,16.241)
P: (-133.202,-6.398,20.743)
C4': (-129.373,-6.869,20.431)
C2': (-128.176,-6.416,18.448)
C2: (-126.693,-9.520,14.956)
N1: (-127.461,-10.000,13.977)
N3: (-127.051,-8.979,16.118)
N6: (-129.555,-10.443,13.152)
N7: (-130.587,-9.214,15.796)
N9: (-129.111,-8.462,17.301)
O5': (-131.648,-6.145,20.444)
O3': (-128.497,-4.639,20.127)
OP2: (-133.533,-7.828,20.525)
C3': (-129.112,-5.740,19.451)
C1': (-128.582,-7.885,18.532)
C5': (-130.620,-6.691,21.261)
O4': (-129.533,-8.014,19.570)
C8: (-130.418,-8.654,16.972)
O2': (-126.815,-6.312,18.820)
C6: (-128.794,-9.960,14.133)
C5: (-129.302,-9.408,15.324)
C4: (-128.383,-8.950,16.241)
P: (-133.202,-6.398,20.743)
C4': (-129.373,-6.869,20.431)
C2': (-128.176,-6.416,18.448)
C2: (-126.693,-9.520,14.956)
N1: (-127.461,-10.000,13.977)
N3: (-127.051,-8.979,16.118)
N6: (-129.555,-10.443,13.152)
N7: (-130.587,-9.214,15.796)
N9: (-129.111,-8.462,17.301)
O5': (-131.648,-6.145,20.444)
O3': (-128.497,-4.639,20.127)
Image (generated by PyMOL):