Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1H4Q:T12:T57
Extra
PDB:
ATOM 1 O3' G A 11 -1.934 59.926 104.986 1.00 78.03 O
ATOM 2 P C A 12 -3.350 59.586 105.660 1.00 79.82 P
ATOM 3 OP1 C A 12 -3.421 58.108 105.771 1.00 76.43 O
ATOM 4 OP2 C A 12 -4.415 60.325 104.933 1.00 78.98 O
ATOM 5 O5' C A 12 -3.244 60.196 107.125 1.00 77.72 O
ATOM 6 C5' C A 12 -4.374 60.201 107.980 1.00 78.96 C
ATOM 7 C4' C A 12 -4.193 61.212 109.079 1.00 80.17 C
ATOM 8 O4' C A 12 -3.649 62.423 108.510 1.00 77.92 O
ATOM 9 C3' C A 12 -5.527 61.585 109.703 1.00 83.48 C
ATOM 10 O3' C A 12 -5.603 61.492 111.125 1.00 87.10 O
ATOM 11 C2' C A 12 -5.955 62.883 109.024 1.00 81.62 C
ATOM 12 O2' C A 12 -6.468 63.818 109.946 1.00 82.35 O
ATOM 13 C1' C A 12 -4.628 63.438 108.493 1.00 80.53 C
ATOM 14 N1 C A 12 -4.682 63.986 107.132 1.00 81.44 N
ATOM 15 C2 C A 12 -4.810 65.371 106.963 1.00 81.75 C
ATOM 16 O2 C A 12 -4.886 66.096 107.970 1.00 82.32 O
ATOM 17 N3 C A 12 -4.841 65.885 105.712 1.00 80.93 N
ATOM 18 C4 C A 12 -4.751 65.072 104.656 1.00 81.60 C
ATOM 19 N4 C A 12 -4.780 65.623 103.437 1.00 83.46 N
ATOM 20 C5 C A 12 -4.626 63.658 104.800 1.00 81.69 C
ATOM 21 C6 C A 12 -4.599 63.162 106.044 1.00 80.61 C
ATOM 22 P C A 13 -5.625 60.052 111.842 1.00 87.67 P
ATOM 23 OP1 C A 13 -5.629 60.279 113.309 1.00 87.99 O
ATOM 24 OP2 C A 13 -4.565 59.208 111.236 1.00 85.16 O
ATOM 25 O5' C A 13 -7.032 59.440 111.423 1.00 96.25 O
TER
ATOM 1 O3' A B 56 -0.902 69.283 113.332 1.00 60.97 O
ATOM 2 P U B 57 -2.225 68.799 114.113 1.00 60.34 P
ATOM 3 OP1 U B 57 -2.936 69.995 114.630 1.00 59.74 O
ATOM 4 OP2 U B 57 -1.866 67.706 115.044 1.00 67.19 O
ATOM 5 O5' U B 57 -3.123 68.131 112.990 1.00 55.46 O
ATOM 6 C5' U B 57 -4.042 67.128 113.342 1.00 55.88 C
ATOM 7 C4' U B 57 -4.222 66.164 112.211 1.00 62.61 C
ATOM 8 O4' U B 57 -2.922 65.679 111.777 1.00 64.47 O
ATOM 9 C3' U B 57 -4.966 64.957 112.750 1.00 68.32 C
ATOM 10 O3' U B 57 -6.137 64.592 112.038 1.00 72.66 O
ATOM 11 C2' U B 57 -3.914 63.896 113.045 1.00 66.25 C
ATOM 12 O2' U B 57 -4.344 62.597 112.710 1.00 66.42 O
ATOM 13 C1' U B 57 -2.781 64.308 112.097 1.00 64.94 C
ATOM 14 N1 U B 57 -1.414 64.046 112.566 1.00 61.44 N
ATOM 15 C2 U B 57 -0.876 62.801 112.282 1.00 61.27 C
ATOM 16 O2 U B 57 -1.482 61.945 111.653 1.00 62.15 O
ATOM 17 N3 U B 57 0.394 62.594 112.758 1.00 59.25 N
ATOM 18 C4 U B 57 1.162 63.485 113.471 1.00 61.81 C
ATOM 19 O4 U B 57 2.287 63.151 113.840 1.00 66.65 O
ATOM 20 C5 U B 57 0.538 64.754 113.717 1.00 61.99 C
ATOM 21 C6 U B 57 -0.698 64.984 113.264 1.00 60.02 C
ATOM 22 P C B 58 -7.566 64.733 112.735 1.00 77.64 P
ATOM 23 OP1 C B 58 -8.488 63.812 112.026 1.00 78.62 O
ATOM 24 OP2 C B 58 -7.878 66.187 112.822 1.00 72.50 O
ATOM 25 O5' C B 58 -7.341 64.166 114.204 1.00 79.48 O
TER
ATOM 2 P C A 12 -3.350 59.586 105.660 1.00 79.82 P
ATOM 3 OP1 C A 12 -3.421 58.108 105.771 1.00 76.43 O
ATOM 4 OP2 C A 12 -4.415 60.325 104.933 1.00 78.98 O
ATOM 5 O5' C A 12 -3.244 60.196 107.125 1.00 77.72 O
ATOM 6 C5' C A 12 -4.374 60.201 107.980 1.00 78.96 C
ATOM 7 C4' C A 12 -4.193 61.212 109.079 1.00 80.17 C
ATOM 8 O4' C A 12 -3.649 62.423 108.510 1.00 77.92 O
ATOM 9 C3' C A 12 -5.527 61.585 109.703 1.00 83.48 C
ATOM 10 O3' C A 12 -5.603 61.492 111.125 1.00 87.10 O
ATOM 11 C2' C A 12 -5.955 62.883 109.024 1.00 81.62 C
ATOM 12 O2' C A 12 -6.468 63.818 109.946 1.00 82.35 O
ATOM 13 C1' C A 12 -4.628 63.438 108.493 1.00 80.53 C
ATOM 14 N1 C A 12 -4.682 63.986 107.132 1.00 81.44 N
ATOM 15 C2 C A 12 -4.810 65.371 106.963 1.00 81.75 C
ATOM 16 O2 C A 12 -4.886 66.096 107.970 1.00 82.32 O
ATOM 17 N3 C A 12 -4.841 65.885 105.712 1.00 80.93 N
ATOM 18 C4 C A 12 -4.751 65.072 104.656 1.00 81.60 C
ATOM 19 N4 C A 12 -4.780 65.623 103.437 1.00 83.46 N
ATOM 20 C5 C A 12 -4.626 63.658 104.800 1.00 81.69 C
ATOM 21 C6 C A 12 -4.599 63.162 106.044 1.00 80.61 C
ATOM 22 P C A 13 -5.625 60.052 111.842 1.00 87.67 P
ATOM 23 OP1 C A 13 -5.629 60.279 113.309 1.00 87.99 O
ATOM 24 OP2 C A 13 -4.565 59.208 111.236 1.00 85.16 O
ATOM 25 O5' C A 13 -7.032 59.440 111.423 1.00 96.25 O
TER
ATOM 1 O3' A B 56 -0.902 69.283 113.332 1.00 60.97 O
ATOM 2 P U B 57 -2.225 68.799 114.113 1.00 60.34 P
ATOM 3 OP1 U B 57 -2.936 69.995 114.630 1.00 59.74 O
ATOM 4 OP2 U B 57 -1.866 67.706 115.044 1.00 67.19 O
ATOM 5 O5' U B 57 -3.123 68.131 112.990 1.00 55.46 O
ATOM 6 C5' U B 57 -4.042 67.128 113.342 1.00 55.88 C
ATOM 7 C4' U B 57 -4.222 66.164 112.211 1.00 62.61 C
ATOM 8 O4' U B 57 -2.922 65.679 111.777 1.00 64.47 O
ATOM 9 C3' U B 57 -4.966 64.957 112.750 1.00 68.32 C
ATOM 10 O3' U B 57 -6.137 64.592 112.038 1.00 72.66 O
ATOM 11 C2' U B 57 -3.914 63.896 113.045 1.00 66.25 C
ATOM 12 O2' U B 57 -4.344 62.597 112.710 1.00 66.42 O
ATOM 13 C1' U B 57 -2.781 64.308 112.097 1.00 64.94 C
ATOM 14 N1 U B 57 -1.414 64.046 112.566 1.00 61.44 N
ATOM 15 C2 U B 57 -0.876 62.801 112.282 1.00 61.27 C
ATOM 16 O2 U B 57 -1.482 61.945 111.653 1.00 62.15 O
ATOM 17 N3 U B 57 0.394 62.594 112.758 1.00 59.25 N
ATOM 18 C4 U B 57 1.162 63.485 113.471 1.00 61.81 C
ATOM 19 O4 U B 57 2.287 63.151 113.840 1.00 66.65 O
ATOM 20 C5 U B 57 0.538 64.754 113.717 1.00 61.99 C
ATOM 21 C6 U B 57 -0.698 64.984 113.264 1.00 60.02 C
ATOM 22 P C B 58 -7.566 64.733 112.735 1.00 77.64 P
ATOM 23 OP1 C B 58 -8.488 63.812 112.026 1.00 78.62 O
ATOM 24 OP2 C B 58 -7.878 66.187 112.822 1.00 72.50 O
ATOM 25 O5' C B 58 -7.341 64.166 114.204 1.00 79.48 O
TER
Atoms:
C2: (-4.810,65.371,106.963)
OP1: (-3.421,58.108,105.771)
OP2: (-4.415,60.325,104.933)
C4: (-4.751,65.072,104.656)
O5': (-3.244,60.196,107.125)
C3': (-5.527,61.585,109.703)
C1': (-4.628,63.438,108.493)
O4': (-3.649,62.423,108.510)
C5': (-4.374,60.201,107.980)
P: (-3.350,59.586,105.660)
O2: (-4.886,66.096,107.970)
C4': (-4.193,61.212,109.079)
C2': (-5.955,62.883,109.024)
O2': (-6.468,63.818,109.946)
N1: (-4.682,63.986,107.132)
N3: (-4.841,65.885,105.712)
N4: (-4.780,65.623,103.437)
C6: (-4.599,63.162,106.044)
C5: (-4.626,63.658,104.800)
O3': (-5.603,61.492,111.125)
OP1: (-3.421,58.108,105.771)
OP2: (-4.415,60.325,104.933)
C4: (-4.751,65.072,104.656)
O5': (-3.244,60.196,107.125)
C3': (-5.527,61.585,109.703)
C1': (-4.628,63.438,108.493)
O4': (-3.649,62.423,108.510)
C5': (-4.374,60.201,107.980)
P: (-3.350,59.586,105.660)
O2: (-4.886,66.096,107.970)
C4': (-4.193,61.212,109.079)
C2': (-5.955,62.883,109.024)
O2': (-6.468,63.818,109.946)
N1: (-4.682,63.986,107.132)
N3: (-4.841,65.885,105.712)
N4: (-4.780,65.623,103.437)
C6: (-4.599,63.162,106.044)
C5: (-4.626,63.658,104.800)
O3': (-5.603,61.492,111.125)
C4: (1.162,63.485,113.471)
N3: (0.394,62.594,112.758)
OP1: (-2.936,69.995,114.630)
OP2: (-1.866,67.706,115.044)
C2: (-0.876,62.801,112.282)
C1': (-2.781,64.308,112.097)
C3': (-4.966,64.957,112.750)
O5': (-3.123,68.131,112.990)
O4': (-2.922,65.679,111.777)
C5': (-4.042,67.128,113.342)
P: (-2.225,68.799,114.113)
C4': (-4.222,66.164,112.211)
C2': (-3.914,63.896,113.045)
O2': (-4.344,62.597,112.710)
N1: (-1.414,64.046,112.566)
O4: (2.287,63.151,113.840)
O2: (-1.482,61.945,111.653)
C6: (-0.698,64.984,113.264)
C5: (0.538,64.754,113.717)
O3': (-6.137,64.592,112.038)
N3: (0.394,62.594,112.758)
OP1: (-2.936,69.995,114.630)
OP2: (-1.866,67.706,115.044)
C2: (-0.876,62.801,112.282)
C1': (-2.781,64.308,112.097)
C3': (-4.966,64.957,112.750)
O5': (-3.123,68.131,112.990)
O4': (-2.922,65.679,111.777)
C5': (-4.042,67.128,113.342)
P: (-2.225,68.799,114.113)
C4': (-4.222,66.164,112.211)
C2': (-3.914,63.896,113.045)
O2': (-4.344,62.597,112.710)
N1: (-1.414,64.046,112.566)
O4: (2.287,63.151,113.840)
O2: (-1.482,61.945,111.653)
C6: (-0.698,64.984,113.264)
C5: (0.538,64.754,113.717)
O3': (-6.137,64.592,112.038)
Image (generated by PyMOL):