Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1H4S:T12:T57
Extra
PDB:
ATOM 1 O3' G A 11 -1.810 59.679 104.998 1.00 74.85 O
ATOM 2 P C A 12 -3.279 59.381 105.579 1.00 75.78 P
ATOM 3 OP1 C A 12 -3.487 57.910 105.537 1.00 71.52 O
ATOM 4 OP2 C A 12 -4.243 60.283 104.894 1.00 67.48 O
ATOM 5 O5' C A 12 -3.188 59.829 107.103 1.00 73.62 O
ATOM 6 C5' C A 12 -4.359 59.912 107.890 1.00 73.99 C
ATOM 7 C4' C A 12 -4.198 60.954 108.963 1.00 76.13 C
ATOM 8 O4' C A 12 -3.628 62.149 108.383 1.00 72.41 O
ATOM 9 C3' C A 12 -5.552 61.350 109.521 1.00 80.67 C
ATOM 10 O3' C A 12 -5.680 61.271 110.936 1.00 83.07 O
ATOM 11 C2' C A 12 -5.947 62.638 108.804 1.00 79.98 C
ATOM 12 O2' C A 12 -6.489 63.590 109.691 1.00 86.02 O
ATOM 13 C1' C A 12 -4.594 63.177 108.326 1.00 77.71 C
ATOM 14 N1 C A 12 -4.589 63.733 106.966 1.00 78.06 N
ATOM 15 C2 C A 12 -4.809 65.103 106.794 1.00 76.86 C
ATOM 16 O2 C A 12 -5.014 65.806 107.793 1.00 79.11 O
ATOM 17 N3 C A 12 -4.788 65.624 105.548 1.00 75.83 N
ATOM 18 C4 C A 12 -4.556 64.831 104.498 1.00 77.51 C
ATOM 19 N4 C A 12 -4.538 65.387 103.280 1.00 79.91 N
ATOM 20 C5 C A 12 -4.332 63.432 104.645 1.00 77.66 C
ATOM 21 C6 C A 12 -4.360 62.930 105.885 1.00 77.67 C
ATOM 22 P C A 13 -5.532 59.850 111.679 1.00 83.32 P
ATOM 23 OP1 C A 13 -5.355 60.131 113.131 1.00 85.53 O
ATOM 24 OP2 C A 13 -4.522 59.020 110.964 1.00 75.27 O
ATOM 25 O5' C A 13 -6.953 59.164 111.467 1.00 90.16 O
TER
ATOM 1 O3' A B 56 -0.994 69.063 113.244 1.00 61.29 O
ATOM 2 P U B 57 -2.332 68.569 114.011 1.00 57.88 P
ATOM 3 OP1 U B 57 -3.009 69.759 114.590 1.00 54.21 O
ATOM 4 OP2 U B 57 -2.002 67.426 114.892 1.00 61.07 O
ATOM 5 O5' U B 57 -3.253 67.958 112.874 1.00 50.30 O
ATOM 6 C5' U B 57 -4.121 66.897 113.192 1.00 54.41 C
ATOM 7 C4' U B 57 -4.233 65.935 112.044 1.00 60.68 C
ATOM 8 O4' U B 57 -2.911 65.484 111.645 1.00 63.55 O
ATOM 9 C3' U B 57 -4.950 64.706 112.567 1.00 66.12 C
ATOM 10 O3' U B 57 -6.114 64.319 111.866 1.00 70.38 O
ATOM 11 C2' U B 57 -3.880 63.673 112.888 1.00 66.63 C
ATOM 12 O2' U B 57 -4.277 62.367 112.543 1.00 68.32 O
ATOM 13 C1' U B 57 -2.739 64.117 111.971 1.00 65.00 C
ATOM 14 N1 U B 57 -1.372 63.882 112.467 1.00 59.81 N
ATOM 15 C2 U B 57 -0.798 62.670 112.137 1.00 55.69 C
ATOM 16 O2 U B 57 -1.369 61.837 111.453 1.00 53.15 O
ATOM 17 N3 U B 57 0.468 62.468 112.629 1.00 54.74 N
ATOM 18 C4 U B 57 1.204 63.336 113.397 1.00 57.54 C
ATOM 19 O4 U B 57 2.326 63.000 113.774 1.00 58.98 O
ATOM 20 C5 U B 57 0.548 64.579 113.690 1.00 60.83 C
ATOM 21 C6 U B 57 -0.691 64.804 113.224 1.00 60.52 C
ATOM 22 P C B 58 -7.530 64.382 112.599 1.00 73.15 P
ATOM 23 OP1 C B 58 -8.440 63.447 111.886 1.00 73.78 O
ATOM 24 OP2 C B 58 -7.887 65.824 112.745 1.00 65.92 O
ATOM 25 O5' C B 58 -7.244 63.782 114.046 1.00 79.56 O
TER
ATOM 2 P C A 12 -3.279 59.381 105.579 1.00 75.78 P
ATOM 3 OP1 C A 12 -3.487 57.910 105.537 1.00 71.52 O
ATOM 4 OP2 C A 12 -4.243 60.283 104.894 1.00 67.48 O
ATOM 5 O5' C A 12 -3.188 59.829 107.103 1.00 73.62 O
ATOM 6 C5' C A 12 -4.359 59.912 107.890 1.00 73.99 C
ATOM 7 C4' C A 12 -4.198 60.954 108.963 1.00 76.13 C
ATOM 8 O4' C A 12 -3.628 62.149 108.383 1.00 72.41 O
ATOM 9 C3' C A 12 -5.552 61.350 109.521 1.00 80.67 C
ATOM 10 O3' C A 12 -5.680 61.271 110.936 1.00 83.07 O
ATOM 11 C2' C A 12 -5.947 62.638 108.804 1.00 79.98 C
ATOM 12 O2' C A 12 -6.489 63.590 109.691 1.00 86.02 O
ATOM 13 C1' C A 12 -4.594 63.177 108.326 1.00 77.71 C
ATOM 14 N1 C A 12 -4.589 63.733 106.966 1.00 78.06 N
ATOM 15 C2 C A 12 -4.809 65.103 106.794 1.00 76.86 C
ATOM 16 O2 C A 12 -5.014 65.806 107.793 1.00 79.11 O
ATOM 17 N3 C A 12 -4.788 65.624 105.548 1.00 75.83 N
ATOM 18 C4 C A 12 -4.556 64.831 104.498 1.00 77.51 C
ATOM 19 N4 C A 12 -4.538 65.387 103.280 1.00 79.91 N
ATOM 20 C5 C A 12 -4.332 63.432 104.645 1.00 77.66 C
ATOM 21 C6 C A 12 -4.360 62.930 105.885 1.00 77.67 C
ATOM 22 P C A 13 -5.532 59.850 111.679 1.00 83.32 P
ATOM 23 OP1 C A 13 -5.355 60.131 113.131 1.00 85.53 O
ATOM 24 OP2 C A 13 -4.522 59.020 110.964 1.00 75.27 O
ATOM 25 O5' C A 13 -6.953 59.164 111.467 1.00 90.16 O
TER
ATOM 1 O3' A B 56 -0.994 69.063 113.244 1.00 61.29 O
ATOM 2 P U B 57 -2.332 68.569 114.011 1.00 57.88 P
ATOM 3 OP1 U B 57 -3.009 69.759 114.590 1.00 54.21 O
ATOM 4 OP2 U B 57 -2.002 67.426 114.892 1.00 61.07 O
ATOM 5 O5' U B 57 -3.253 67.958 112.874 1.00 50.30 O
ATOM 6 C5' U B 57 -4.121 66.897 113.192 1.00 54.41 C
ATOM 7 C4' U B 57 -4.233 65.935 112.044 1.00 60.68 C
ATOM 8 O4' U B 57 -2.911 65.484 111.645 1.00 63.55 O
ATOM 9 C3' U B 57 -4.950 64.706 112.567 1.00 66.12 C
ATOM 10 O3' U B 57 -6.114 64.319 111.866 1.00 70.38 O
ATOM 11 C2' U B 57 -3.880 63.673 112.888 1.00 66.63 C
ATOM 12 O2' U B 57 -4.277 62.367 112.543 1.00 68.32 O
ATOM 13 C1' U B 57 -2.739 64.117 111.971 1.00 65.00 C
ATOM 14 N1 U B 57 -1.372 63.882 112.467 1.00 59.81 N
ATOM 15 C2 U B 57 -0.798 62.670 112.137 1.00 55.69 C
ATOM 16 O2 U B 57 -1.369 61.837 111.453 1.00 53.15 O
ATOM 17 N3 U B 57 0.468 62.468 112.629 1.00 54.74 N
ATOM 18 C4 U B 57 1.204 63.336 113.397 1.00 57.54 C
ATOM 19 O4 U B 57 2.326 63.000 113.774 1.00 58.98 O
ATOM 20 C5 U B 57 0.548 64.579 113.690 1.00 60.83 C
ATOM 21 C6 U B 57 -0.691 64.804 113.224 1.00 60.52 C
ATOM 22 P C B 58 -7.530 64.382 112.599 1.00 73.15 P
ATOM 23 OP1 C B 58 -8.440 63.447 111.886 1.00 73.78 O
ATOM 24 OP2 C B 58 -7.887 65.824 112.745 1.00 65.92 O
ATOM 25 O5' C B 58 -7.244 63.782 114.046 1.00 79.56 O
TER
Atoms:
C2: (-4.809,65.103,106.794)
OP1: (-3.487,57.910,105.537)
OP2: (-4.243,60.283,104.894)
C4: (-4.556,64.831,104.498)
O5': (-3.188,59.829,107.103)
C3': (-5.552,61.350,109.521)
C1': (-4.594,63.177,108.326)
O4': (-3.628,62.149,108.383)
C5': (-4.359,59.912,107.890)
P: (-3.279,59.381,105.579)
O2: (-5.014,65.806,107.793)
C4': (-4.198,60.954,108.963)
C2': (-5.947,62.638,108.804)
O2': (-6.489,63.590,109.691)
N1: (-4.589,63.733,106.966)
N3: (-4.788,65.624,105.548)
N4: (-4.538,65.387,103.280)
C6: (-4.360,62.930,105.885)
C5: (-4.332,63.432,104.645)
O3': (-5.680,61.271,110.936)
OP1: (-3.487,57.910,105.537)
OP2: (-4.243,60.283,104.894)
C4: (-4.556,64.831,104.498)
O5': (-3.188,59.829,107.103)
C3': (-5.552,61.350,109.521)
C1': (-4.594,63.177,108.326)
O4': (-3.628,62.149,108.383)
C5': (-4.359,59.912,107.890)
P: (-3.279,59.381,105.579)
O2: (-5.014,65.806,107.793)
C4': (-4.198,60.954,108.963)
C2': (-5.947,62.638,108.804)
O2': (-6.489,63.590,109.691)
N1: (-4.589,63.733,106.966)
N3: (-4.788,65.624,105.548)
N4: (-4.538,65.387,103.280)
C6: (-4.360,62.930,105.885)
C5: (-4.332,63.432,104.645)
O3': (-5.680,61.271,110.936)
C4: (1.204,63.336,113.397)
N3: (0.468,62.468,112.629)
OP1: (-3.009,69.759,114.590)
OP2: (-2.002,67.426,114.892)
C2: (-0.798,62.670,112.137)
C1': (-2.739,64.117,111.971)
C3': (-4.950,64.706,112.567)
O5': (-3.253,67.958,112.874)
O4': (-2.911,65.484,111.645)
C5': (-4.121,66.897,113.192)
P: (-2.332,68.569,114.011)
C4': (-4.233,65.935,112.044)
C2': (-3.880,63.673,112.888)
O2': (-4.277,62.367,112.543)
N1: (-1.372,63.882,112.467)
O4: (2.326,63.000,113.774)
O2: (-1.369,61.837,111.453)
C6: (-0.691,64.804,113.224)
C5: (0.548,64.579,113.690)
O3': (-6.114,64.319,111.866)
N3: (0.468,62.468,112.629)
OP1: (-3.009,69.759,114.590)
OP2: (-2.002,67.426,114.892)
C2: (-0.798,62.670,112.137)
C1': (-2.739,64.117,111.971)
C3': (-4.950,64.706,112.567)
O5': (-3.253,67.958,112.874)
O4': (-2.911,65.484,111.645)
C5': (-4.121,66.897,113.192)
P: (-2.332,68.569,114.011)
C4': (-4.233,65.935,112.044)
C2': (-3.880,63.673,112.888)
O2': (-4.277,62.367,112.543)
N1: (-1.372,63.882,112.467)
O4: (2.326,63.000,113.774)
O2: (-1.369,61.837,111.453)
C6: (-0.691,64.804,113.224)
C5: (0.548,64.579,113.690)
O3': (-6.114,64.319,111.866)
Image (generated by PyMOL):