ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNK:B45:B38

Extra

PDB:
ATOM 1 O3' A A 44 -15.981-154.495 173.038 1.00 97.61 O
ATOM 2 P A A 45 -15.501-155.173 171.670 1.00104.82 P
ATOM 3 OP1 A A 45 -15.504-154.116 170.617 1.00 99.79 O
ATOM 4 OP2 A A 45 -16.286-156.422 171.465 1.00 97.26 O
ATOM 5 O5' A A 45 -13.988-155.573 171.972 1.00 96.29 O
ATOM 6 C5' A A 45 -12.913-154.725 171.581 1.00 96.10 C
ATOM 7 C4' A A 45 -11.628-155.507 171.554 1.00 94.58 C
ATOM 8 O4' A A 45 -11.154-155.748 172.899 1.00 87.50 O
ATOM 9 C3' A A 45 -11.754-156.889 170.937 1.00 87.53 C
ATOM 10 O3' A A 45 -11.637-156.820 169.524 1.00 86.87 O
ATOM 11 C2' A A 45 -10.601-157.651 171.569 1.00 86.97 C
ATOM 12 O2' A A 45 -9.398-157.433 170.865 1.00 95.47 O
ATOM 13 C1' A A 45 -10.511-157.002 172.952 1.00 86.86 C
ATOM 14 N9 A A 45 -11.119-157.793 174.018 1.00 89.71 N
ATOM 15 C8 A A 45 -12.409-157.765 174.490 1.00 89.03 C
ATOM 16 N7 A A 45 -12.630-158.611 175.469 1.00 89.54 N
ATOM 17 C5 A A 45 -11.403-159.237 175.655 1.00 92.14 C
ATOM 18 C6 A A 45 -10.972-160.243 176.544 1.00 90.21 C
ATOM 19 N6 A A 45 -11.757-160.823 177.453 1.00 89.87 N
ATOM 20 N1 A A 45 -9.686-160.639 176.462 1.00 87.37 N
ATOM 21 C2 A A 45 -8.894-160.073 175.549 1.00 88.78 C
ATOM 22 N3 A A 45 -9.179-159.127 174.659 1.00 90.74 N
ATOM 23 C4 A A 45 -10.465-158.745 174.766 1.00 92.34 C
ATOM 24 P C A 46 -12.395-157.899 168.612 1.00 94.03 P
ATOM 25 OP1 C A 46 -12.938-157.230 167.399 1.00 85.57 O
ATOM 26 OP2 C A 46 -13.303-158.677 169.489 1.00 93.56 O
ATOM 27 O5' C A 46 -11.242-158.895 168.164 1.00 86.48 O
TER

ATOM 1 O3' C B 37 -7.761-170.002 175.321 1.00 97.75 O
ATOM 2 P A B 38 -7.099-169.241 176.583 1.00 99.20 P
ATOM 3 OP1 A B 38 -5.754-169.801 176.868 1.00 96.26 O
ATOM 4 OP2 A B 38 -8.099-169.140 177.681 1.00 98.21 O
ATOM 5 O5' A B 38 -6.890-167.759 176.063 1.00 96.33 O
ATOM 6 C5' A B 38 -6.730-166.712 176.991 1.00 98.07 C
ATOM 7 C4' A B 38 -7.696-165.613 176.684 1.00 97.56 C
ATOM 8 O4' A B 38 -9.034-166.149 176.494 1.00 97.05 O
ATOM 9 C3' A B 38 -7.843-164.599 177.801 1.00 97.67 C
ATOM 10 O3' A B 38 -6.785-163.649 177.787 1.00 95.43 O
ATOM 11 C2' A B 38 -9.216-164.001 177.518 1.00 97.32 C
ATOM 12 O2' A B 38 -9.191-162.992 176.530 1.00 92.47 O
ATOM 13 C1' A B 38 -9.986-165.215 176.980 1.00 99.34 C
ATOM 14 N9 A B 38 -10.831-165.857 177.998 1.00104.14 N
ATOM 15 C8 A B 38 -10.905-167.185 178.364 1.00100.41 C
ATOM 16 N7 A B 38 -11.765-167.419 179.330 1.00101.74 N
ATOM 17 C5 A B 38 -12.295-166.164 179.619 1.00101.25 C
ATOM 18 C6 A B 38 -13.257-165.729 180.560 1.00 96.93 C
ATOM 19 N6 A B 38 -13.870-166.539 181.430 1.00 99.79 N
ATOM 20 N1 A B 38 -13.563-164.413 180.581 1.00 92.68 N
ATOM 21 C2 A B 38 -12.937-163.595 179.731 1.00 94.83 C
ATOM 22 N3 A B 38 -12.015-163.876 178.815 1.00 95.51 N
ATOM 23 C4 A B 38 -11.735-165.195 178.805 1.00 99.56 C
ATOM 24 P U B 39 -5.591-163.763 178.863 1.00 82.45 P
ATOM 25 OP1 U B 39 -4.641-164.814 178.416 1.00 91.56 O
ATOM 26 OP2 U B 39 -6.185-163.835 180.224 1.00 81.44 O
ATOM 27 O5' U B 39 -4.857-162.369 178.734 1.00 87.42 O
TER

Atoms:
OP1: (-15.504,-154.116,170.617)
OP2: (-16.286,-156.422,171.465)
C3': (-11.754,-156.889,170.937)
C1': (-10.511,-157.002,172.952)
C5': (-12.913,-154.725,171.581)
O4': (-11.154,-155.748,172.899)
C8: (-12.409,-157.765,174.490)
O2': (-9.398,-157.433,170.865)
C6: (-10.972,-160.243,176.544)
C5: (-11.403,-159.237,175.655)
C4: (-10.465,-158.745,174.766)
P: (-15.501,-155.173,171.670)
C4': (-11.628,-155.507,171.554)
C2': (-10.601,-157.651,171.569)
C2: (-8.894,-160.073,175.549)
N1: (-9.686,-160.639,176.462)
N3: (-9.179,-159.127,174.659)
N6: (-11.757,-160.823,177.453)
N7: (-12.630,-158.611,175.469)
N9: (-11.119,-157.793,174.018)
O5': (-13.988,-155.573,171.972)
O3': (-11.637,-156.820,169.524)
OP1: (-5.754,-169.801,176.868)
OP2: (-8.099,-169.140,177.681)
C3': (-7.843,-164.599,177.801)
C1': (-9.986,-165.215,176.980)
C5': (-6.730,-166.712,176.991)
O4': (-9.034,-166.149,176.494)
C8: (-10.905,-167.185,178.364)
O2': (-9.191,-162.992,176.530)
C6: (-13.257,-165.729,180.560)
C5: (-12.295,-166.164,179.619)
C4: (-11.735,-165.195,178.805)
P: (-7.099,-169.241,176.583)
C4': (-7.696,-165.613,176.684)
C2': (-9.216,-164.001,177.518)
C2: (-12.937,-163.595,179.731)
N1: (-13.563,-164.413,180.581)
N3: (-12.015,-163.876,178.815)
N6: (-13.870,-166.539,181.430)
N7: (-11.765,-167.419,179.330)
N9: (-10.831,-165.857,177.998)
O5': (-6.890,-167.759,176.063)
O3': (-6.785,-163.649,177.787)
Image (generated by PyMOL):
PyMOL image
show in jmol