Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1J1U:B15:B60
Extra
PDB:
ATOM 1 O3' G A 14 -16.052 27.832 90.818 1.00 62.49 O
ATOM 2 P C A 15 -16.505 27.443 89.323 1.00 62.78 P
ATOM 3 OP1 C A 15 -17.928 26.966 89.335 1.00 64.85 O
ATOM 4 OP2 C A 15 -15.462 26.609 88.637 1.00 57.59 O
ATOM 5 O5' C A 15 -16.526 28.832 88.544 1.00 58.01 O
ATOM 6 C5' C A 15 -17.130 29.997 89.075 1.00 49.68 C
ATOM 7 C4' C A 15 -16.801 31.115 88.131 1.00 52.19 C
ATOM 8 O4' C A 15 -15.404 31.323 88.209 1.00 56.29 O
ATOM 9 C3' C A 15 -17.115 30.677 86.709 1.00 51.98 C
ATOM 10 O3' C A 15 -17.826 31.772 86.170 1.00 44.20 O
ATOM 11 C2' C A 15 -15.778 30.592 85.976 1.00 50.59 C
ATOM 12 O2' C A 15 -15.751 31.185 84.699 1.00 53.85 O
ATOM 13 C1' C A 15 -14.855 31.322 86.943 1.00 56.13 C
ATOM 14 N1 C A 15 -13.508 30.834 87.073 1.00 60.81 N
ATOM 15 C2 C A 15 -12.499 31.719 86.742 1.00 69.26 C
ATOM 16 O2 C A 15 -12.831 32.884 86.396 1.00 64.69 O
ATOM 17 N3 C A 15 -11.204 31.304 86.801 1.00 73.77 N
ATOM 18 C4 C A 15 -10.922 30.046 87.166 1.00 74.18 C
ATOM 19 N4 C A 15 -9.633 29.657 87.143 1.00 76.74 N
ATOM 20 C5 C A 15 -11.951 29.126 87.550 1.00 72.03 C
ATOM 21 C6 C A 15 -13.222 29.561 87.489 1.00 67.14 C
ATOM 22 P C A 16 -19.430 31.737 86.076 1.00 46.61 P
ATOM 23 OP1 C A 16 -19.792 33.125 85.704 1.00 34.41 O
ATOM 24 OP2 C A 16 -20.042 31.054 87.226 1.00 40.87 O
ATOM 25 O5' C A 16 -19.621 30.828 84.771 1.00 49.53 O
TER
ATOM 1 O3' A B 59 -13.465 39.168 88.981 1.00 29.92 O
ATOM 2 P U B 60 -14.689 39.519 87.957 1.00 33.44 P
ATOM 3 OP1 U B 60 -14.215 40.207 86.797 1.00 33.70 O
ATOM 4 OP2 U B 60 -15.818 40.142 88.678 1.00 33.85 O
ATOM 5 O5' U B 60 -15.216 38.038 87.634 1.00 32.93 O
ATOM 6 C5' U B 60 -14.449 37.054 86.893 1.00 33.31 C
ATOM 7 C4' U B 60 -15.211 35.771 86.877 1.00 29.22 C
ATOM 8 O4' U B 60 -15.550 35.393 88.214 1.00 36.72 O
ATOM 9 C3' U B 60 -16.532 35.938 86.087 1.00 34.96 C
ATOM 10 O3' U B 60 -16.703 34.764 85.238 1.00 34.90 O
ATOM 11 C2' U B 60 -17.625 35.879 87.151 1.00 37.88 C
ATOM 12 O2' U B 60 -18.907 35.421 86.725 1.00 36.32 O
ATOM 13 C1' U B 60 -16.942 35.091 88.284 1.00 35.22 C
ATOM 14 N1 U B 60 -17.426 35.438 89.620 1.00 34.61 N
ATOM 15 C2 U B 60 -18.096 34.488 90.367 1.00 35.73 C
ATOM 16 O2 U B 60 -18.383 33.343 89.939 1.00 42.00 O
ATOM 17 N3 U B 60 -18.449 34.917 91.625 1.00 33.66 N
ATOM 18 C4 U B 60 -18.256 36.165 92.171 1.00 35.32 C
ATOM 19 O4 U B 60 -18.700 36.398 93.260 1.00 36.90 O
ATOM 20 C5 U B 60 -17.605 37.100 91.335 1.00 34.85 C
ATOM 21 C6 U B 60 -17.211 36.719 90.113 1.00 31.50 C
ATOM 22 P C B 61 -16.339 34.827 83.663 1.00 41.34 P
ATOM 23 OP1 C B 61 -16.425 33.411 83.231 1.00 37.81 O
ATOM 24 OP2 C B 61 -15.075 35.599 83.421 1.00 39.78 O
ATOM 25 O5' C B 61 -17.450 35.789 82.993 1.00 37.55 O
TER
ATOM 2 P C A 15 -16.505 27.443 89.323 1.00 62.78 P
ATOM 3 OP1 C A 15 -17.928 26.966 89.335 1.00 64.85 O
ATOM 4 OP2 C A 15 -15.462 26.609 88.637 1.00 57.59 O
ATOM 5 O5' C A 15 -16.526 28.832 88.544 1.00 58.01 O
ATOM 6 C5' C A 15 -17.130 29.997 89.075 1.00 49.68 C
ATOM 7 C4' C A 15 -16.801 31.115 88.131 1.00 52.19 C
ATOM 8 O4' C A 15 -15.404 31.323 88.209 1.00 56.29 O
ATOM 9 C3' C A 15 -17.115 30.677 86.709 1.00 51.98 C
ATOM 10 O3' C A 15 -17.826 31.772 86.170 1.00 44.20 O
ATOM 11 C2' C A 15 -15.778 30.592 85.976 1.00 50.59 C
ATOM 12 O2' C A 15 -15.751 31.185 84.699 1.00 53.85 O
ATOM 13 C1' C A 15 -14.855 31.322 86.943 1.00 56.13 C
ATOM 14 N1 C A 15 -13.508 30.834 87.073 1.00 60.81 N
ATOM 15 C2 C A 15 -12.499 31.719 86.742 1.00 69.26 C
ATOM 16 O2 C A 15 -12.831 32.884 86.396 1.00 64.69 O
ATOM 17 N3 C A 15 -11.204 31.304 86.801 1.00 73.77 N
ATOM 18 C4 C A 15 -10.922 30.046 87.166 1.00 74.18 C
ATOM 19 N4 C A 15 -9.633 29.657 87.143 1.00 76.74 N
ATOM 20 C5 C A 15 -11.951 29.126 87.550 1.00 72.03 C
ATOM 21 C6 C A 15 -13.222 29.561 87.489 1.00 67.14 C
ATOM 22 P C A 16 -19.430 31.737 86.076 1.00 46.61 P
ATOM 23 OP1 C A 16 -19.792 33.125 85.704 1.00 34.41 O
ATOM 24 OP2 C A 16 -20.042 31.054 87.226 1.00 40.87 O
ATOM 25 O5' C A 16 -19.621 30.828 84.771 1.00 49.53 O
TER
ATOM 1 O3' A B 59 -13.465 39.168 88.981 1.00 29.92 O
ATOM 2 P U B 60 -14.689 39.519 87.957 1.00 33.44 P
ATOM 3 OP1 U B 60 -14.215 40.207 86.797 1.00 33.70 O
ATOM 4 OP2 U B 60 -15.818 40.142 88.678 1.00 33.85 O
ATOM 5 O5' U B 60 -15.216 38.038 87.634 1.00 32.93 O
ATOM 6 C5' U B 60 -14.449 37.054 86.893 1.00 33.31 C
ATOM 7 C4' U B 60 -15.211 35.771 86.877 1.00 29.22 C
ATOM 8 O4' U B 60 -15.550 35.393 88.214 1.00 36.72 O
ATOM 9 C3' U B 60 -16.532 35.938 86.087 1.00 34.96 C
ATOM 10 O3' U B 60 -16.703 34.764 85.238 1.00 34.90 O
ATOM 11 C2' U B 60 -17.625 35.879 87.151 1.00 37.88 C
ATOM 12 O2' U B 60 -18.907 35.421 86.725 1.00 36.32 O
ATOM 13 C1' U B 60 -16.942 35.091 88.284 1.00 35.22 C
ATOM 14 N1 U B 60 -17.426 35.438 89.620 1.00 34.61 N
ATOM 15 C2 U B 60 -18.096 34.488 90.367 1.00 35.73 C
ATOM 16 O2 U B 60 -18.383 33.343 89.939 1.00 42.00 O
ATOM 17 N3 U B 60 -18.449 34.917 91.625 1.00 33.66 N
ATOM 18 C4 U B 60 -18.256 36.165 92.171 1.00 35.32 C
ATOM 19 O4 U B 60 -18.700 36.398 93.260 1.00 36.90 O
ATOM 20 C5 U B 60 -17.605 37.100 91.335 1.00 34.85 C
ATOM 21 C6 U B 60 -17.211 36.719 90.113 1.00 31.50 C
ATOM 22 P C B 61 -16.339 34.827 83.663 1.00 41.34 P
ATOM 23 OP1 C B 61 -16.425 33.411 83.231 1.00 37.81 O
ATOM 24 OP2 C B 61 -15.075 35.599 83.421 1.00 39.78 O
ATOM 25 O5' C B 61 -17.450 35.789 82.993 1.00 37.55 O
TER
Atoms:
C2: (-12.499,31.719,86.742)
OP1: (-17.928,26.966,89.335)
OP2: (-15.462,26.609,88.637)
C4: (-10.922,30.046,87.166)
O5': (-16.526,28.832,88.544)
C3': (-17.115,30.677,86.709)
C1': (-14.855,31.322,86.943)
O4': (-15.404,31.323,88.209)
C5': (-17.130,29.997,89.075)
P: (-16.505,27.443,89.323)
O2: (-12.831,32.884,86.396)
C4': (-16.801,31.115,88.131)
C2': (-15.778,30.592,85.976)
O2': (-15.751,31.185,84.699)
N1: (-13.508,30.834,87.073)
N3: (-11.204,31.304,86.801)
N4: (-9.633,29.657,87.143)
C6: (-13.222,29.561,87.489)
C5: (-11.951,29.126,87.550)
O3': (-17.826,31.772,86.170)
OP1: (-17.928,26.966,89.335)
OP2: (-15.462,26.609,88.637)
C4: (-10.922,30.046,87.166)
O5': (-16.526,28.832,88.544)
C3': (-17.115,30.677,86.709)
C1': (-14.855,31.322,86.943)
O4': (-15.404,31.323,88.209)
C5': (-17.130,29.997,89.075)
P: (-16.505,27.443,89.323)
O2: (-12.831,32.884,86.396)
C4': (-16.801,31.115,88.131)
C2': (-15.778,30.592,85.976)
O2': (-15.751,31.185,84.699)
N1: (-13.508,30.834,87.073)
N3: (-11.204,31.304,86.801)
N4: (-9.633,29.657,87.143)
C6: (-13.222,29.561,87.489)
C5: (-11.951,29.126,87.550)
O3': (-17.826,31.772,86.170)
C4: (-18.256,36.165,92.171)
N3: (-18.449,34.917,91.625)
OP1: (-14.215,40.207,86.797)
OP2: (-15.818,40.142,88.678)
C2: (-18.096,34.488,90.367)
C1': (-16.942,35.091,88.284)
C3': (-16.532,35.938,86.087)
O5': (-15.216,38.038,87.634)
O4': (-15.550,35.393,88.214)
C5': (-14.449,37.054,86.893)
P: (-14.689,39.519,87.957)
C4': (-15.211,35.771,86.877)
C2': (-17.625,35.879,87.151)
O2': (-18.907,35.421,86.725)
N1: (-17.426,35.438,89.620)
O4: (-18.700,36.398,93.260)
O2: (-18.383,33.343,89.939)
C6: (-17.211,36.719,90.113)
C5: (-17.605,37.100,91.335)
O3': (-16.703,34.764,85.238)
N3: (-18.449,34.917,91.625)
OP1: (-14.215,40.207,86.797)
OP2: (-15.818,40.142,88.678)
C2: (-18.096,34.488,90.367)
C1': (-16.942,35.091,88.284)
C3': (-16.532,35.938,86.087)
O5': (-15.216,38.038,87.634)
O4': (-15.550,35.393,88.214)
C5': (-14.449,37.054,86.893)
P: (-14.689,39.519,87.957)
C4': (-15.211,35.771,86.877)
C2': (-17.625,35.879,87.151)
O2': (-18.907,35.421,86.725)
N1: (-17.426,35.438,89.620)
O4: (-18.700,36.398,93.260)
O2: (-18.383,33.343,89.939)
C6: (-17.211,36.719,90.113)
C5: (-17.605,37.100,91.335)
O3': (-16.703,34.764,85.238)
Image (generated by PyMOL):