Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:V15:V60
Extra
PDB:
ATOM 1 O3' G A 14 -67.577 137.575 124.034 1.00 63.26 O
ATOM 2 P C A 15 -67.071 138.227 125.414 1.00 73.21 P
ATOM 3 OP1 C A 15 -67.660 139.587 125.431 1.00 78.95 O
ATOM 4 OP2 C A 15 -65.597 138.063 125.533 1.00 78.95 O
ATOM 5 O5' C A 15 -67.758 137.356 126.559 1.00 43.36 O
ATOM 6 C5' C A 15 -69.164 137.481 126.829 1.00 43.36 C
ATOM 7 C4' C A 15 -69.490 136.994 128.224 1.00 43.36 C
ATOM 8 O4' C A 15 -69.261 135.567 128.307 1.00 43.36 O
ATOM 9 C3' C A 15 -68.714 137.626 129.367 1.00 43.36 C
ATOM 10 O3' C A 15 -69.610 137.791 130.461 1.00 43.36 O
ATOM 11 C2' C A 15 -67.640 136.588 129.679 1.00 43.36 C
ATOM 12 O2' C A 15 -67.246 136.574 131.032 1.00 43.36 O
ATOM 13 C1' C A 15 -68.343 135.276 129.337 1.00 43.36 C
ATOM 14 N1 C A 15 -67.421 134.242 128.826 1.00 68.05 N
ATOM 15 C2 C A 15 -67.363 132.990 129.467 1.00 68.05 C
ATOM 16 O2 C A 15 -68.078 132.782 130.459 1.00 68.05 O
ATOM 17 N3 C A 15 -66.527 132.039 128.981 1.00 68.05 N
ATOM 18 C4 C A 15 -65.771 132.297 127.906 1.00 68.05 C
ATOM 19 N4 C A 15 -64.965 131.326 127.453 1.00 68.05 N
ATOM 20 C5 C A 15 -65.808 133.559 127.243 1.00 68.05 C
ATOM 21 C6 C A 15 -66.635 134.492 127.731 1.00 68.05 C
ATOM 22 P C A 16 -70.012 139.272 130.935 1.00 45.58 P
ATOM 23 OP1 C A 16 -71.204 139.184 131.819 1.00 45.58 O
ATOM 24 OP2 C A 16 -70.059 140.145 129.721 1.00 45.08 O
ATOM 25 O5' C A 16 -68.776 139.705 131.836 1.00175.50 O
TER
ATOM 1 O3' A B 59 -73.568 130.265 131.116 1.00 51.64 O
ATOM 2 P U B 60 -73.970 131.219 132.352 1.00 45.33 P
ATOM 3 OP1 U B 60 -73.466 130.564 133.589 1.00 44.46 O
ATOM 4 OP2 U B 60 -75.406 131.546 132.232 1.00 44.46 O
ATOM 5 O5' U B 60 -73.135 132.551 132.107 1.00 16.77 O
ATOM 6 C5' U B 60 -71.731 132.470 131.853 1.00 16.77 C
ATOM 7 C4' U B 60 -71.186 133.809 131.430 1.00 16.77 C
ATOM 8 O4' U B 60 -71.745 134.190 130.149 1.00 16.77 O
ATOM 9 C3' U B 60 -71.476 134.944 132.395 1.00 16.77 C
ATOM 10 O3' U B 60 -70.338 135.796 132.422 1.00 16.77 O
ATOM 11 C2' U B 60 -72.678 135.626 131.761 1.00 16.77 C
ATOM 12 O2' U B 60 -72.755 136.994 132.081 1.00 16.77 O
ATOM 13 C1' U B 60 -72.410 135.419 130.270 1.00 16.77 C
ATOM 14 N1 U B 60 -73.629 135.348 129.456 1.00 35.90 N
ATOM 15 C2 U B 60 -73.768 136.279 128.448 1.00 35.90 C
ATOM 16 O2 U B 60 -72.929 137.129 128.214 1.00 35.90 O
ATOM 17 N3 U B 60 -74.928 136.184 127.724 1.00 35.90 N
ATOM 18 C4 U B 60 -75.949 135.271 127.905 1.00 35.90 C
ATOM 19 O4 U B 60 -76.967 135.352 127.200 1.00 35.90 O
ATOM 20 C5 U B 60 -75.724 134.326 128.969 1.00 35.90 C
ATOM 21 C6 U B 60 -74.601 134.396 129.687 1.00 35.90 C
ATOM 22 P C B 61 -69.331 135.734 133.675 1.00 64.79 P
ATOM 23 OP1 C B 61 -68.229 136.677 133.350 1.00 38.75 O
ATOM 24 OP2 C B 61 -69.000 134.327 134.041 1.00 38.75 O
ATOM 25 O5' C B 61 -70.210 136.326 134.865 1.00104.90 O
TER
ATOM 2 P C A 15 -67.071 138.227 125.414 1.00 73.21 P
ATOM 3 OP1 C A 15 -67.660 139.587 125.431 1.00 78.95 O
ATOM 4 OP2 C A 15 -65.597 138.063 125.533 1.00 78.95 O
ATOM 5 O5' C A 15 -67.758 137.356 126.559 1.00 43.36 O
ATOM 6 C5' C A 15 -69.164 137.481 126.829 1.00 43.36 C
ATOM 7 C4' C A 15 -69.490 136.994 128.224 1.00 43.36 C
ATOM 8 O4' C A 15 -69.261 135.567 128.307 1.00 43.36 O
ATOM 9 C3' C A 15 -68.714 137.626 129.367 1.00 43.36 C
ATOM 10 O3' C A 15 -69.610 137.791 130.461 1.00 43.36 O
ATOM 11 C2' C A 15 -67.640 136.588 129.679 1.00 43.36 C
ATOM 12 O2' C A 15 -67.246 136.574 131.032 1.00 43.36 O
ATOM 13 C1' C A 15 -68.343 135.276 129.337 1.00 43.36 C
ATOM 14 N1 C A 15 -67.421 134.242 128.826 1.00 68.05 N
ATOM 15 C2 C A 15 -67.363 132.990 129.467 1.00 68.05 C
ATOM 16 O2 C A 15 -68.078 132.782 130.459 1.00 68.05 O
ATOM 17 N3 C A 15 -66.527 132.039 128.981 1.00 68.05 N
ATOM 18 C4 C A 15 -65.771 132.297 127.906 1.00 68.05 C
ATOM 19 N4 C A 15 -64.965 131.326 127.453 1.00 68.05 N
ATOM 20 C5 C A 15 -65.808 133.559 127.243 1.00 68.05 C
ATOM 21 C6 C A 15 -66.635 134.492 127.731 1.00 68.05 C
ATOM 22 P C A 16 -70.012 139.272 130.935 1.00 45.58 P
ATOM 23 OP1 C A 16 -71.204 139.184 131.819 1.00 45.58 O
ATOM 24 OP2 C A 16 -70.059 140.145 129.721 1.00 45.08 O
ATOM 25 O5' C A 16 -68.776 139.705 131.836 1.00175.50 O
TER
ATOM 1 O3' A B 59 -73.568 130.265 131.116 1.00 51.64 O
ATOM 2 P U B 60 -73.970 131.219 132.352 1.00 45.33 P
ATOM 3 OP1 U B 60 -73.466 130.564 133.589 1.00 44.46 O
ATOM 4 OP2 U B 60 -75.406 131.546 132.232 1.00 44.46 O
ATOM 5 O5' U B 60 -73.135 132.551 132.107 1.00 16.77 O
ATOM 6 C5' U B 60 -71.731 132.470 131.853 1.00 16.77 C
ATOM 7 C4' U B 60 -71.186 133.809 131.430 1.00 16.77 C
ATOM 8 O4' U B 60 -71.745 134.190 130.149 1.00 16.77 O
ATOM 9 C3' U B 60 -71.476 134.944 132.395 1.00 16.77 C
ATOM 10 O3' U B 60 -70.338 135.796 132.422 1.00 16.77 O
ATOM 11 C2' U B 60 -72.678 135.626 131.761 1.00 16.77 C
ATOM 12 O2' U B 60 -72.755 136.994 132.081 1.00 16.77 O
ATOM 13 C1' U B 60 -72.410 135.419 130.270 1.00 16.77 C
ATOM 14 N1 U B 60 -73.629 135.348 129.456 1.00 35.90 N
ATOM 15 C2 U B 60 -73.768 136.279 128.448 1.00 35.90 C
ATOM 16 O2 U B 60 -72.929 137.129 128.214 1.00 35.90 O
ATOM 17 N3 U B 60 -74.928 136.184 127.724 1.00 35.90 N
ATOM 18 C4 U B 60 -75.949 135.271 127.905 1.00 35.90 C
ATOM 19 O4 U B 60 -76.967 135.352 127.200 1.00 35.90 O
ATOM 20 C5 U B 60 -75.724 134.326 128.969 1.00 35.90 C
ATOM 21 C6 U B 60 -74.601 134.396 129.687 1.00 35.90 C
ATOM 22 P C B 61 -69.331 135.734 133.675 1.00 64.79 P
ATOM 23 OP1 C B 61 -68.229 136.677 133.350 1.00 38.75 O
ATOM 24 OP2 C B 61 -69.000 134.327 134.041 1.00 38.75 O
ATOM 25 O5' C B 61 -70.210 136.326 134.865 1.00104.90 O
TER
Atoms:
C2: (-67.363,132.990,129.467)
OP1: (-67.660,139.587,125.431)
OP2: (-65.597,138.063,125.533)
C4: (-65.771,132.297,127.906)
O5': (-67.758,137.356,126.559)
C3': (-68.714,137.626,129.367)
C1': (-68.343,135.276,129.337)
O4': (-69.261,135.567,128.307)
C5': (-69.164,137.481,126.829)
P: (-67.071,138.227,125.414)
O2: (-68.078,132.782,130.459)
C4': (-69.490,136.994,128.224)
C2': (-67.640,136.588,129.679)
O2': (-67.246,136.574,131.032)
N1: (-67.421,134.242,128.826)
N3: (-66.527,132.039,128.981)
N4: (-64.965,131.326,127.453)
C6: (-66.635,134.492,127.731)
C5: (-65.808,133.559,127.243)
O3': (-69.610,137.791,130.461)
OP1: (-67.660,139.587,125.431)
OP2: (-65.597,138.063,125.533)
C4: (-65.771,132.297,127.906)
O5': (-67.758,137.356,126.559)
C3': (-68.714,137.626,129.367)
C1': (-68.343,135.276,129.337)
O4': (-69.261,135.567,128.307)
C5': (-69.164,137.481,126.829)
P: (-67.071,138.227,125.414)
O2: (-68.078,132.782,130.459)
C4': (-69.490,136.994,128.224)
C2': (-67.640,136.588,129.679)
O2': (-67.246,136.574,131.032)
N1: (-67.421,134.242,128.826)
N3: (-66.527,132.039,128.981)
N4: (-64.965,131.326,127.453)
C6: (-66.635,134.492,127.731)
C5: (-65.808,133.559,127.243)
O3': (-69.610,137.791,130.461)
C4: (-75.949,135.271,127.905)
N3: (-74.928,136.184,127.724)
OP1: (-73.466,130.564,133.589)
OP2: (-75.406,131.546,132.232)
C2: (-73.768,136.279,128.448)
C1': (-72.410,135.419,130.270)
C3': (-71.476,134.944,132.395)
O5': (-73.135,132.551,132.107)
O4': (-71.745,134.190,130.149)
C5': (-71.731,132.470,131.853)
P: (-73.970,131.219,132.352)
C4': (-71.186,133.809,131.430)
C2': (-72.678,135.626,131.761)
O2': (-72.755,136.994,132.081)
N1: (-73.629,135.348,129.456)
O4: (-76.967,135.352,127.200)
O2: (-72.929,137.129,128.214)
C6: (-74.601,134.396,129.687)
C5: (-75.724,134.326,128.969)
O3': (-70.338,135.796,132.422)
N3: (-74.928,136.184,127.724)
OP1: (-73.466,130.564,133.589)
OP2: (-75.406,131.546,132.232)
C2: (-73.768,136.279,128.448)
C1': (-72.410,135.419,130.270)
C3': (-71.476,134.944,132.395)
O5': (-73.135,132.551,132.107)
O4': (-71.745,134.190,130.149)
C5': (-71.731,132.470,131.853)
P: (-73.970,131.219,132.352)
C4': (-71.186,133.809,131.430)
C2': (-72.678,135.626,131.761)
O2': (-72.755,136.994,132.081)
N1: (-73.629,135.348,129.456)
O4: (-76.967,135.352,127.200)
O2: (-72.929,137.129,128.214)
C6: (-74.601,134.396,129.687)
C5: (-75.724,134.326,128.969)
O3': (-70.338,135.796,132.422)
Image (generated by PyMOL):