Doublet info:
Details
Nucleotide types:
UU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:311:3110
Extra
PDB:
ATOM 1 O3' A A 10 27.058 -65.922 16.145 1.00 59.18 O
ATOM 2 P U A 11 28.027 -64.717 15.737 1.00 64.32 P
ATOM 3 OP1 U A 11 29.375 -65.103 16.142 1.00 64.00 O
ATOM 4 OP2 U A 11 27.463 -63.500 16.270 1.00 63.63 O
ATOM 5 O5' U A 11 27.942 -64.703 14.162 1.00 65.34 O
ATOM 6 C5' U A 11 26.699 -64.620 13.484 1.00 65.93 C
ATOM 7 C4' U A 11 26.662 -65.521 12.269 1.00 67.06 C
ATOM 8 O4' U A 11 27.877 -65.352 11.477 1.00 67.35 O
ATOM 9 C3' U A 11 26.568 -67.013 12.565 1.00 67.44 C
ATOM 10 O3' U A 11 25.813 -67.633 11.556 1.00 68.45 O
ATOM 11 C2' U A 11 27.993 -67.483 12.423 1.00 67.51 C
ATOM 12 O2' U A 11 28.111 -68.860 12.134 1.00 68.21 O
ATOM 13 C1' U A 11 28.467 -66.621 11.264 1.00 67.88 C
ATOM 14 N1 U A 11 29.900 -66.466 11.230 1.00 67.65 N
ATOM 15 C2 U A 11 30.594 -67.009 10.194 1.00 68.47 C
ATOM 16 O2 U A 11 30.075 -67.587 9.274 1.00 69.38 O
ATOM 17 N3 U A 11 31.934 -66.854 10.273 1.00 68.19 N
ATOM 18 C4 U A 11 32.602 -66.216 11.279 1.00 67.19 C
ATOM 19 O4 U A 11 33.801 -66.136 11.217 1.00 67.06 O
ATOM 20 C5 U A 11 31.826 -65.682 12.329 1.00 66.38 C
ATOM 21 C6 U A 11 30.510 -65.849 12.276 1.00 66.65 C
ATOM 22 P A A 12 24.332 -68.027 11.871 1.00 67.82 P
ATOM 23 OP1 A A 12 23.642 -68.341 10.572 1.00 68.90 O
ATOM 24 OP2 A A 12 23.800 -66.944 12.736 1.00 66.92 O
ATOM 25 O5' A A 12 24.483 -69.344 12.704 1.00 67.76 O
TER
ATOM 1 O3' G B 109 29.401 -67.604 4.386 1.00 72.95 O
ATOM 2 P U B 110 28.175 -68.616 4.188 1.00 69.90 P
ATOM 3 OP1 U B 110 28.748 -69.958 3.943 1.00 70.55 O
ATOM 4 OP2 U B 110 27.254 -68.028 3.173 1.00 70.50 O
ATOM 5 O5' U B 110 27.504 -68.589 5.604 1.00 68.98 O
ATOM 6 C5' U B 110 28.254 -68.932 6.740 1.00 68.23 C
ATOM 7 C4' U B 110 27.420 -68.808 7.959 1.00 67.45 C
ATOM 8 O4' U B 110 26.985 -67.432 8.069 1.00 66.89 O
ATOM 9 C3' U B 110 26.169 -69.670 7.950 1.00 67.97 C
ATOM 10 O3' U B 110 26.027 -70.324 9.196 1.00 67.41 O
ATOM 11 C2' U B 110 25.031 -68.671 7.751 1.00 67.87 C
ATOM 12 O2' U B 110 23.829 -69.005 8.411 1.00 67.73 O
ATOM 13 C1' U B 110 25.607 -67.378 8.299 1.00 66.90 C
ATOM 14 N1 U B 110 25.052 -66.185 7.630 1.00 66.97 N
ATOM 15 C2 U B 110 24.321 -65.276 8.380 1.00 66.23 C
ATOM 16 O2 U B 110 24.181 -65.336 9.598 1.00 65.46 O
ATOM 17 N3 U B 110 23.781 -64.255 7.656 1.00 66.41 N
ATOM 18 C4 U B 110 23.882 -64.071 6.307 1.00 67.24 C
ATOM 19 O4 U B 110 23.332 -63.094 5.804 1.00 67.30 O
ATOM 20 C5 U B 110 24.644 -65.048 5.618 1.00 67.97 C
ATOM 21 C6 U B 110 25.174 -66.059 6.279 1.00 67.83 C
ATOM 22 P G B 111 25.197 -71.680 9.273 1.00 77.56 P
ATOM 23 OP1 G B 111 25.538 -72.459 8.066 1.00 78.66 O
ATOM 24 OP2 G B 111 23.785 -71.312 9.521 1.00 77.45 O
ATOM 25 O5' G B 111 25.776 -72.388 10.544 1.00 76.91 O
TER
ATOM 2 P U A 11 28.027 -64.717 15.737 1.00 64.32 P
ATOM 3 OP1 U A 11 29.375 -65.103 16.142 1.00 64.00 O
ATOM 4 OP2 U A 11 27.463 -63.500 16.270 1.00 63.63 O
ATOM 5 O5' U A 11 27.942 -64.703 14.162 1.00 65.34 O
ATOM 6 C5' U A 11 26.699 -64.620 13.484 1.00 65.93 C
ATOM 7 C4' U A 11 26.662 -65.521 12.269 1.00 67.06 C
ATOM 8 O4' U A 11 27.877 -65.352 11.477 1.00 67.35 O
ATOM 9 C3' U A 11 26.568 -67.013 12.565 1.00 67.44 C
ATOM 10 O3' U A 11 25.813 -67.633 11.556 1.00 68.45 O
ATOM 11 C2' U A 11 27.993 -67.483 12.423 1.00 67.51 C
ATOM 12 O2' U A 11 28.111 -68.860 12.134 1.00 68.21 O
ATOM 13 C1' U A 11 28.467 -66.621 11.264 1.00 67.88 C
ATOM 14 N1 U A 11 29.900 -66.466 11.230 1.00 67.65 N
ATOM 15 C2 U A 11 30.594 -67.009 10.194 1.00 68.47 C
ATOM 16 O2 U A 11 30.075 -67.587 9.274 1.00 69.38 O
ATOM 17 N3 U A 11 31.934 -66.854 10.273 1.00 68.19 N
ATOM 18 C4 U A 11 32.602 -66.216 11.279 1.00 67.19 C
ATOM 19 O4 U A 11 33.801 -66.136 11.217 1.00 67.06 O
ATOM 20 C5 U A 11 31.826 -65.682 12.329 1.00 66.38 C
ATOM 21 C6 U A 11 30.510 -65.849 12.276 1.00 66.65 C
ATOM 22 P A A 12 24.332 -68.027 11.871 1.00 67.82 P
ATOM 23 OP1 A A 12 23.642 -68.341 10.572 1.00 68.90 O
ATOM 24 OP2 A A 12 23.800 -66.944 12.736 1.00 66.92 O
ATOM 25 O5' A A 12 24.483 -69.344 12.704 1.00 67.76 O
TER
ATOM 1 O3' G B 109 29.401 -67.604 4.386 1.00 72.95 O
ATOM 2 P U B 110 28.175 -68.616 4.188 1.00 69.90 P
ATOM 3 OP1 U B 110 28.748 -69.958 3.943 1.00 70.55 O
ATOM 4 OP2 U B 110 27.254 -68.028 3.173 1.00 70.50 O
ATOM 5 O5' U B 110 27.504 -68.589 5.604 1.00 68.98 O
ATOM 6 C5' U B 110 28.254 -68.932 6.740 1.00 68.23 C
ATOM 7 C4' U B 110 27.420 -68.808 7.959 1.00 67.45 C
ATOM 8 O4' U B 110 26.985 -67.432 8.069 1.00 66.89 O
ATOM 9 C3' U B 110 26.169 -69.670 7.950 1.00 67.97 C
ATOM 10 O3' U B 110 26.027 -70.324 9.196 1.00 67.41 O
ATOM 11 C2' U B 110 25.031 -68.671 7.751 1.00 67.87 C
ATOM 12 O2' U B 110 23.829 -69.005 8.411 1.00 67.73 O
ATOM 13 C1' U B 110 25.607 -67.378 8.299 1.00 66.90 C
ATOM 14 N1 U B 110 25.052 -66.185 7.630 1.00 66.97 N
ATOM 15 C2 U B 110 24.321 -65.276 8.380 1.00 66.23 C
ATOM 16 O2 U B 110 24.181 -65.336 9.598 1.00 65.46 O
ATOM 17 N3 U B 110 23.781 -64.255 7.656 1.00 66.41 N
ATOM 18 C4 U B 110 23.882 -64.071 6.307 1.00 67.24 C
ATOM 19 O4 U B 110 23.332 -63.094 5.804 1.00 67.30 O
ATOM 20 C5 U B 110 24.644 -65.048 5.618 1.00 67.97 C
ATOM 21 C6 U B 110 25.174 -66.059 6.279 1.00 67.83 C
ATOM 22 P G B 111 25.197 -71.680 9.273 1.00 77.56 P
ATOM 23 OP1 G B 111 25.538 -72.459 8.066 1.00 78.66 O
ATOM 24 OP2 G B 111 23.785 -71.312 9.521 1.00 77.45 O
ATOM 25 O5' G B 111 25.776 -72.388 10.544 1.00 76.91 O
TER
Atoms:
C4: (32.602,-66.216,11.279)
N3: (31.934,-66.854,10.273)
OP1: (29.375,-65.103,16.142)
OP2: (27.463,-63.500,16.270)
C2: (30.594,-67.009,10.194)
C1': (28.467,-66.621,11.264)
C3': (26.568,-67.013,12.565)
O5': (27.942,-64.703,14.162)
O4': (27.877,-65.352,11.477)
C5': (26.699,-64.620,13.484)
P: (28.027,-64.717,15.737)
C4': (26.662,-65.521,12.269)
C2': (27.993,-67.483,12.423)
O2': (28.111,-68.860,12.134)
N1: (29.900,-66.466,11.230)
O4: (33.801,-66.136,11.217)
O2: (30.075,-67.587,9.274)
C6: (30.510,-65.849,12.276)
C5: (31.826,-65.682,12.329)
O3': (25.813,-67.633,11.556)
N3: (31.934,-66.854,10.273)
OP1: (29.375,-65.103,16.142)
OP2: (27.463,-63.500,16.270)
C2: (30.594,-67.009,10.194)
C1': (28.467,-66.621,11.264)
C3': (26.568,-67.013,12.565)
O5': (27.942,-64.703,14.162)
O4': (27.877,-65.352,11.477)
C5': (26.699,-64.620,13.484)
P: (28.027,-64.717,15.737)
C4': (26.662,-65.521,12.269)
C2': (27.993,-67.483,12.423)
O2': (28.111,-68.860,12.134)
N1: (29.900,-66.466,11.230)
O4: (33.801,-66.136,11.217)
O2: (30.075,-67.587,9.274)
C6: (30.510,-65.849,12.276)
C5: (31.826,-65.682,12.329)
O3': (25.813,-67.633,11.556)
C4: (23.882,-64.071,6.307)
N3: (23.781,-64.255,7.656)
OP1: (28.748,-69.958,3.943)
OP2: (27.254,-68.028,3.173)
C2: (24.321,-65.276,8.380)
C1': (25.607,-67.378,8.299)
C3': (26.169,-69.670,7.950)
O5': (27.504,-68.589,5.604)
O4': (26.985,-67.432,8.069)
C5': (28.254,-68.932,6.740)
P: (28.175,-68.616,4.188)
C4': (27.420,-68.808,7.959)
C2': (25.031,-68.671,7.751)
O2': (23.829,-69.005,8.411)
N1: (25.052,-66.185,7.630)
O4: (23.332,-63.094,5.804)
O2: (24.181,-65.336,9.598)
C6: (25.174,-66.059,6.279)
C5: (24.644,-65.048,5.618)
O3': (26.027,-70.324,9.196)
N3: (23.781,-64.255,7.656)
OP1: (28.748,-69.958,3.943)
OP2: (27.254,-68.028,3.173)
C2: (24.321,-65.276,8.380)
C1': (25.607,-67.378,8.299)
C3': (26.169,-69.670,7.950)
O5': (27.504,-68.589,5.604)
O4': (26.985,-67.432,8.069)
C5': (28.254,-68.932,6.740)
P: (28.175,-68.616,4.188)
C4': (27.420,-68.808,7.959)
C2': (25.031,-68.671,7.751)
O2': (23.829,-69.005,8.411)
N1: (25.052,-66.185,7.630)
O4: (23.332,-63.094,5.804)
O2: (24.181,-65.336,9.598)
C6: (25.174,-66.059,6.279)
C5: (24.644,-65.048,5.618)
O3': (26.027,-70.324,9.196)
Image (generated by PyMOL):