Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MHK:S9:L9
Extra
PDB:
ATOM 1 O3' A A 8 -1.536 -10.405 10.858 1.00 69.36 O
ATOM 2 P C A 9 -1.805 -11.605 9.833 1.00 69.40 P
ATOM 3 OP1 C A 9 -3.212 -11.467 9.376 1.00 70.19 O
ATOM 4 OP2 C A 9 -1.363 -12.873 10.463 1.00 70.69 O
ATOM 5 O5' C A 9 -0.839 -11.248 8.622 1.00 66.86 O
ATOM 6 C5' C A 9 -0.944 -9.982 7.989 1.00 65.88 C
ATOM 7 C4' C A 9 0.336 -9.643 7.283 1.00 65.03 C
ATOM 8 O4' C A 9 1.408 -9.515 8.247 1.00 64.37 O
ATOM 9 C3' C A 9 0.832 -10.707 6.326 1.00 65.81 C
ATOM 10 O3' C A 9 0.158 -10.599 5.077 1.00 67.46 O
ATOM 11 C2' C A 9 2.314 -10.373 6.220 1.00 64.64 C
ATOM 12 O2' C A 9 2.574 -9.333 5.308 1.00 61.21 O
ATOM 13 C1' C A 9 2.629 -9.923 7.652 1.00 65.18 C
ATOM 14 N1 C A 9 3.187 -11.017 8.459 1.00 65.96 N
ATOM 15 C2 C A 9 4.551 -11.304 8.354 1.00 65.10 C
ATOM 16 O2 C A 9 5.255 -10.599 7.612 1.00 63.64 O
ATOM 17 N3 C A 9 5.065 -12.340 9.061 1.00 65.50 N
ATOM 18 C4 C A 9 4.269 -13.070 9.848 1.00 65.36 C
ATOM 19 N4 C A 9 4.807 -14.099 10.506 1.00 65.25 N
ATOM 20 C5 C A 9 2.881 -12.783 9.990 1.00 66.01 C
ATOM 21 C6 C A 9 2.386 -11.756 9.286 1.00 66.14 C
ATOM 22 P C A 10 -0.203 -11.928 4.256 1.00 67.05 P
ATOM 23 OP1 C A 10 -0.889 -11.516 3.002 1.00 68.42 O
ATOM 24 OP2 C A 10 -0.866 -12.885 5.184 1.00 66.23 O
ATOM 25 O5' C A 10 1.224 -12.495 3.847 1.00 65.57 O
TER
ATOM 1 O3' G B 8 10.619 -8.162 9.210 1.00 53.67 O
ATOM 2 P U B 9 10.952 -7.508 7.788 1.00 53.64 P
ATOM 3 OP1 U B 9 11.649 -8.528 6.972 1.00 55.58 O
ATOM 4 OP2 U B 9 11.584 -6.184 8.001 1.00 53.93 O
ATOM 5 O5' U B 9 9.510 -7.308 7.148 1.00 53.12 O
ATOM 6 C5' U B 9 8.638 -8.419 7.005 1.00 49.49 C
ATOM 7 C4' U B 9 7.220 -7.949 6.918 1.00 49.02 C
ATOM 8 O4' U B 9 6.858 -7.281 8.160 1.00 47.23 O
ATOM 9 C3' U B 9 6.959 -6.898 5.854 1.00 48.70 C
ATOM 10 O3' U B 9 6.800 -7.481 4.562 1.00 50.05 O
ATOM 11 C2' U B 9 5.680 -6.257 6.372 1.00 47.93 C
ATOM 12 O2' U B 9 4.546 -7.047 6.110 1.00 45.34 O
ATOM 13 C1' U B 9 5.954 -6.223 7.882 1.00 47.25 C
ATOM 14 N1 U B 9 6.604 -4.966 8.275 1.00 46.76 N
ATOM 15 C2 U B 9 5.811 -3.821 8.392 1.00 45.72 C
ATOM 16 O2 U B 9 4.600 -3.815 8.209 1.00 42.43 O
ATOM 17 N3 U B 9 6.499 -2.681 8.726 1.00 44.19 N
ATOM 18 C4 U B 9 7.852 -2.566 8.942 1.00 43.00 C
ATOM 19 O4 U B 9 8.323 -1.460 9.174 1.00 42.36 O
ATOM 20 C5 U B 9 8.593 -3.789 8.820 1.00 43.59 C
ATOM 21 C6 U B 9 7.960 -4.918 8.502 1.00 43.69 C
ATOM 22 P G B 10 6.875 -6.543 3.256 1.00 51.77 P
ATOM 23 OP1 G B 10 6.882 -7.393 2.042 1.00 50.65 O
ATOM 24 OP2 G B 10 7.965 -5.554 3.468 1.00 50.49 O
ATOM 25 O5' G B 10 5.474 -5.782 3.277 1.00 49.96 O
TER
ATOM 2 P C A 9 -1.805 -11.605 9.833 1.00 69.40 P
ATOM 3 OP1 C A 9 -3.212 -11.467 9.376 1.00 70.19 O
ATOM 4 OP2 C A 9 -1.363 -12.873 10.463 1.00 70.69 O
ATOM 5 O5' C A 9 -0.839 -11.248 8.622 1.00 66.86 O
ATOM 6 C5' C A 9 -0.944 -9.982 7.989 1.00 65.88 C
ATOM 7 C4' C A 9 0.336 -9.643 7.283 1.00 65.03 C
ATOM 8 O4' C A 9 1.408 -9.515 8.247 1.00 64.37 O
ATOM 9 C3' C A 9 0.832 -10.707 6.326 1.00 65.81 C
ATOM 10 O3' C A 9 0.158 -10.599 5.077 1.00 67.46 O
ATOM 11 C2' C A 9 2.314 -10.373 6.220 1.00 64.64 C
ATOM 12 O2' C A 9 2.574 -9.333 5.308 1.00 61.21 O
ATOM 13 C1' C A 9 2.629 -9.923 7.652 1.00 65.18 C
ATOM 14 N1 C A 9 3.187 -11.017 8.459 1.00 65.96 N
ATOM 15 C2 C A 9 4.551 -11.304 8.354 1.00 65.10 C
ATOM 16 O2 C A 9 5.255 -10.599 7.612 1.00 63.64 O
ATOM 17 N3 C A 9 5.065 -12.340 9.061 1.00 65.50 N
ATOM 18 C4 C A 9 4.269 -13.070 9.848 1.00 65.36 C
ATOM 19 N4 C A 9 4.807 -14.099 10.506 1.00 65.25 N
ATOM 20 C5 C A 9 2.881 -12.783 9.990 1.00 66.01 C
ATOM 21 C6 C A 9 2.386 -11.756 9.286 1.00 66.14 C
ATOM 22 P C A 10 -0.203 -11.928 4.256 1.00 67.05 P
ATOM 23 OP1 C A 10 -0.889 -11.516 3.002 1.00 68.42 O
ATOM 24 OP2 C A 10 -0.866 -12.885 5.184 1.00 66.23 O
ATOM 25 O5' C A 10 1.224 -12.495 3.847 1.00 65.57 O
TER
ATOM 1 O3' G B 8 10.619 -8.162 9.210 1.00 53.67 O
ATOM 2 P U B 9 10.952 -7.508 7.788 1.00 53.64 P
ATOM 3 OP1 U B 9 11.649 -8.528 6.972 1.00 55.58 O
ATOM 4 OP2 U B 9 11.584 -6.184 8.001 1.00 53.93 O
ATOM 5 O5' U B 9 9.510 -7.308 7.148 1.00 53.12 O
ATOM 6 C5' U B 9 8.638 -8.419 7.005 1.00 49.49 C
ATOM 7 C4' U B 9 7.220 -7.949 6.918 1.00 49.02 C
ATOM 8 O4' U B 9 6.858 -7.281 8.160 1.00 47.23 O
ATOM 9 C3' U B 9 6.959 -6.898 5.854 1.00 48.70 C
ATOM 10 O3' U B 9 6.800 -7.481 4.562 1.00 50.05 O
ATOM 11 C2' U B 9 5.680 -6.257 6.372 1.00 47.93 C
ATOM 12 O2' U B 9 4.546 -7.047 6.110 1.00 45.34 O
ATOM 13 C1' U B 9 5.954 -6.223 7.882 1.00 47.25 C
ATOM 14 N1 U B 9 6.604 -4.966 8.275 1.00 46.76 N
ATOM 15 C2 U B 9 5.811 -3.821 8.392 1.00 45.72 C
ATOM 16 O2 U B 9 4.600 -3.815 8.209 1.00 42.43 O
ATOM 17 N3 U B 9 6.499 -2.681 8.726 1.00 44.19 N
ATOM 18 C4 U B 9 7.852 -2.566 8.942 1.00 43.00 C
ATOM 19 O4 U B 9 8.323 -1.460 9.174 1.00 42.36 O
ATOM 20 C5 U B 9 8.593 -3.789 8.820 1.00 43.59 C
ATOM 21 C6 U B 9 7.960 -4.918 8.502 1.00 43.69 C
ATOM 22 P G B 10 6.875 -6.543 3.256 1.00 51.77 P
ATOM 23 OP1 G B 10 6.882 -7.393 2.042 1.00 50.65 O
ATOM 24 OP2 G B 10 7.965 -5.554 3.468 1.00 50.49 O
ATOM 25 O5' G B 10 5.474 -5.782 3.277 1.00 49.96 O
TER
Atoms:
C2: (4.551,-11.304,8.354)
OP1: (-3.212,-11.467,9.376)
OP2: (-1.363,-12.873,10.463)
C4: (4.269,-13.070,9.848)
O5': (-0.839,-11.248,8.622)
C3': (0.832,-10.707,6.326)
C1': (2.629,-9.923,7.652)
O4': (1.408,-9.515,8.247)
C5': (-0.944,-9.982,7.989)
P: (-1.805,-11.605,9.833)
O2: (5.255,-10.599,7.612)
C4': (0.336,-9.643,7.283)
C2': (2.314,-10.373,6.220)
O2': (2.574,-9.333,5.308)
N1: (3.187,-11.017,8.459)
N3: (5.065,-12.340,9.061)
N4: (4.807,-14.099,10.506)
C6: (2.386,-11.756,9.286)
C5: (2.881,-12.783,9.990)
O3': (0.158,-10.599,5.077)
OP1: (-3.212,-11.467,9.376)
OP2: (-1.363,-12.873,10.463)
C4: (4.269,-13.070,9.848)
O5': (-0.839,-11.248,8.622)
C3': (0.832,-10.707,6.326)
C1': (2.629,-9.923,7.652)
O4': (1.408,-9.515,8.247)
C5': (-0.944,-9.982,7.989)
P: (-1.805,-11.605,9.833)
O2: (5.255,-10.599,7.612)
C4': (0.336,-9.643,7.283)
C2': (2.314,-10.373,6.220)
O2': (2.574,-9.333,5.308)
N1: (3.187,-11.017,8.459)
N3: (5.065,-12.340,9.061)
N4: (4.807,-14.099,10.506)
C6: (2.386,-11.756,9.286)
C5: (2.881,-12.783,9.990)
O3': (0.158,-10.599,5.077)
C4: (7.852,-2.566,8.942)
N3: (6.499,-2.681,8.726)
OP1: (11.649,-8.528,6.972)
OP2: (11.584,-6.184,8.001)
C2: (5.811,-3.821,8.392)
C1': (5.954,-6.223,7.882)
C3': (6.959,-6.898,5.854)
O5': (9.510,-7.308,7.148)
O4': (6.858,-7.281,8.160)
C5': (8.638,-8.419,7.005)
P: (10.952,-7.508,7.788)
C4': (7.220,-7.949,6.918)
C2': (5.680,-6.257,6.372)
O2': (4.546,-7.047,6.110)
N1: (6.604,-4.966,8.275)
O4: (8.323,-1.460,9.174)
O2: (4.600,-3.815,8.209)
C6: (7.960,-4.918,8.502)
C5: (8.593,-3.789,8.820)
O3': (6.800,-7.481,4.562)
N3: (6.499,-2.681,8.726)
OP1: (11.649,-8.528,6.972)
OP2: (11.584,-6.184,8.001)
C2: (5.811,-3.821,8.392)
C1': (5.954,-6.223,7.882)
C3': (6.959,-6.898,5.854)
O5': (9.510,-7.308,7.148)
O4': (6.858,-7.281,8.160)
C5': (8.638,-8.419,7.005)
P: (10.952,-7.508,7.788)
C4': (7.220,-7.949,6.918)
C2': (5.680,-6.257,6.372)
O2': (4.546,-7.047,6.110)
N1: (6.604,-4.966,8.275)
O4: (8.323,-1.460,9.174)
O2: (4.600,-3.815,8.209)
C6: (7.960,-4.918,8.502)
C5: (8.593,-3.789,8.820)
O3': (6.800,-7.481,4.562)
Image (generated by PyMOL):