ClaRNA

Doublet info:

Details

Nucleotide types: UU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3B31:A11:B7

Extra

PDB:
ATOM 1 O3' A A 10 10.776 23.778 26.987 1.00 32.54 O
ATOM 2 P U A 11 11.732 24.749 26.137 1.00 32.06 P
ATOM 3 OP1 U A 11 10.917 25.233 24.994 1.00 32.65 O
ATOM 4 OP2 U A 11 13.011 24.039 25.886 1.00 32.47 O
ATOM 5 O5' U A 11 12.013 26.000 27.084 1.00 30.35 O
ATOM 6 C5' U A 11 11.025 27.010 27.288 1.00 31.42 C
ATOM 7 C4' U A 11 11.554 28.064 28.236 1.00 32.16 C
ATOM 8 O4' U A 11 11.797 27.472 29.546 1.00 33.74 O
ATOM 9 C3' U A 11 12.898 28.651 27.852 1.00 32.07 C
ATOM 10 O3' U A 11 12.721 29.717 26.949 1.00 31.36 O
ATOM 11 C2' U A 11 13.413 29.167 29.184 1.00 32.47 C
ATOM 12 O2' U A 11 12.799 30.388 29.527 1.00 33.89 O
ATOM 13 C1' U A 11 12.961 28.048 30.121 1.00 32.94 C
ATOM 14 N1 U A 11 13.969 26.989 30.256 1.00 33.31 N
ATOM 15 C2 U A 11 14.954 27.163 31.204 1.00 33.20 C
ATOM 16 O2 U A 11 15.041 28.162 31.880 1.00 34.80 O
ATOM 17 N3 U A 11 15.841 26.127 31.321 1.00 33.05 N
ATOM 18 C4 U A 11 15.853 24.964 30.586 1.00 31.93 C
ATOM 19 O4 U A 11 16.737 24.127 30.787 1.00 33.26 O
ATOM 20 C5 U A 11 14.819 24.870 29.608 1.00 31.10 C
ATOM 21 C6 U A 11 13.932 25.861 29.479 1.00 32.06 C
ATOM 22 P U A 12 13.744 29.901 25.737 1.00 34.55 P
ATOM 23 OP1 U A 12 13.300 31.117 25.017 1.00 33.31 O
ATOM 24 OP2 U A 12 13.867 28.611 25.021 1.00 33.16 O
ATOM 25 O5' U A 12 15.142 30.203 26.432 1.00 34.91 O
TER

ATOM 1 O3' A B 6 7.245 33.146 34.600 1.00 43.15 O
ATOM 2 P U B 7 6.327 31.863 34.898 1.00 41.93 P
ATOM 3 OP1 U B 7 5.019 32.046 34.228 1.00 41.57 O
ATOM 4 OP2 U B 7 6.372 31.586 36.353 1.00 37.37 O
ATOM 5 O5' U B 7 7.092 30.683 34.155 1.00 42.77 O
ATOM 6 C5' U B 7 8.348 30.224 34.633 1.00 42.22 C
ATOM 7 C4' U B 7 9.369 30.227 33.521 1.00 44.97 C
ATOM 8 O4' U B 7 9.133 29.107 32.625 1.00 44.12 O
ATOM 9 C3' U B 7 9.237 31.463 32.654 1.00 46.25 C
ATOM 10 O3' U B 7 10.212 32.500 32.751 1.00 50.26 O
ATOM 11 C2' U B 7 8.439 31.068 31.417 1.00 44.99 C
ATOM 12 O2' U B 7 8.899 31.613 30.203 1.00 45.62 O
ATOM 13 C1' U B 7 8.669 29.561 31.368 1.00 45.27 C
ATOM 14 N1 U B 7 7.511 28.758 30.963 1.00 45.24 N
ATOM 15 C2 U B 7 7.519 28.244 29.682 1.00 47.10 C
ATOM 16 O2 U B 7 8.433 28.434 28.903 1.00 47.42 O
ATOM 17 N3 U B 7 6.420 27.499 29.347 1.00 47.14 N
ATOM 18 C4 U B 7 5.333 27.229 30.147 1.00 47.90 C
ATOM 19 O4 U B 7 4.399 26.562 29.696 1.00 47.55 O
ATOM 20 C5 U B 7 5.399 27.797 31.459 1.00 46.33 C
ATOM 21 C6 U B 7 6.461 28.525 31.811 1.00 46.59 C
ATOM 22 P U B 8 11.690 32.249 32.204 1.00 47.28 P
ATOM 23 OP1 U B 8 11.589 31.074 31.317 1.00 51.10 O
ATOM 24 OP2 U B 8 12.630 32.228 33.339 1.00 51.33 O
ATOM 25 O5' U B 8 11.957 33.537 31.322 1.00 51.57 O
TER

Atoms:
C4: (15.853,24.964,30.586)
N3: (15.841,26.127,31.321)
OP1: (10.917,25.233,24.994)
OP2: (13.011,24.039,25.886)
C2: (14.954,27.163,31.204)
C1': (12.961,28.048,30.121)
C3': (12.898,28.651,27.852)
O5': (12.013,26.000,27.084)
O4': (11.797,27.472,29.546)
C5': (11.025,27.010,27.288)
P: (11.732,24.749,26.137)
C4': (11.554,28.064,28.236)
C2': (13.413,29.167,29.184)
O2': (12.799,30.388,29.527)
N1: (13.969,26.989,30.256)
O4: (16.737,24.127,30.787)
O2: (15.041,28.162,31.880)
C6: (13.932,25.861,29.479)
C5: (14.819,24.870,29.608)
O3': (12.721,29.717,26.949)
C4: (5.333,27.229,30.147)
N3: (6.420,27.499,29.347)
OP1: (5.019,32.046,34.228)
OP2: (6.372,31.586,36.353)
C2: (7.519,28.244,29.682)
C1': (8.669,29.561,31.368)
C3': (9.237,31.463,32.654)
O5': (7.092,30.683,34.155)
O4': (9.133,29.107,32.625)
C5': (8.348,30.224,34.633)
P: (6.327,31.863,34.898)
C4': (9.369,30.227,33.521)
C2': (8.439,31.068,31.417)
O2': (8.899,31.613,30.203)
N1: (7.511,28.758,30.963)
O4: (4.399,26.562,29.696)
O2: (8.433,28.434,28.903)
C6: (6.461,28.525,31.811)
C5: (5.399,27.797,31.459)
O3': (10.212,32.500,32.751)
Image (generated by PyMOL):
PyMOL image
show in jmol