Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0913:01002
Extra
PDB:
ATOM 1 O3' C A 912 55.593 94.650 71.278 1.00 31.12 O
ATOM 2 P A A 913 54.197 93.854 71.213 1.00 31.62 P
ATOM 3 OP1 A A 913 53.520 94.303 69.962 1.00 28.68 O
ATOM 4 OP2 A A 913 53.491 93.973 72.518 1.00 28.65 O
ATOM 5 O5' A A 913 54.654 92.347 71.001 1.00 26.82 O
ATOM 6 C5' A A 913 55.394 91.991 69.832 1.00 26.97 C
ATOM 7 C4' A A 913 56.099 90.681 70.034 1.00 26.18 C
ATOM 8 O4' A A 913 57.074 90.795 71.095 1.00 25.22 O
ATOM 9 C3' A A 913 55.219 89.535 70.483 1.00 26.51 C
ATOM 10 O3' A A 913 54.532 88.973 69.381 1.00 29.61 O
ATOM 11 C2' A A 913 56.245 88.586 71.060 1.00 24.76 C
ATOM 12 O2' A A 913 56.988 87.982 70.025 1.00 24.44 O
ATOM 13 C1' A A 913 57.155 89.567 71.792 1.00 23.01 C
ATOM 14 N9 A A 913 56.755 89.795 73.182 1.00 20.70 N
ATOM 15 C8 A A 913 56.053 90.852 73.708 1.00 18.52 C
ATOM 16 N7 A A 913 55.879 90.777 75.002 1.00 17.67 N
ATOM 17 C5 A A 913 56.503 89.587 75.354 1.00 17.41 C
ATOM 18 C6 A A 913 56.668 88.931 76.587 1.00 17.05 C
ATOM 19 N6 A A 913 56.235 89.414 77.746 1.00 17.15 N
ATOM 20 N1 A A 913 57.312 87.748 76.587 1.00 19.46 N
ATOM 21 C2 A A 913 57.773 87.268 75.423 1.00 20.67 C
ATOM 22 N3 A A 913 57.694 87.796 74.207 1.00 19.01 N
ATOM 23 C4 A A 913 57.036 88.968 74.241 1.00 18.22 C
ATOM 24 P U A 914 53.029 88.466 69.568 1.00 29.44 P
ATOM 25 OP1 U A 914 52.478 88.247 68.212 1.00 29.42 O
ATOM 26 OP2 U A 914 52.327 89.386 70.510 1.00 27.34 O
ATOM 27 O5' U A 914 53.209 87.067 70.299 1.00 27.46 O
TER
ATOM 1 O3' U B1001 48.964 96.464 82.546 1.00 26.25 O
ATOM 2 P C B1002 50.463 96.991 82.736 1.00 27.13 P
ATOM 3 OP1 C B1002 50.531 97.670 84.051 1.00 25.54 O
ATOM 4 OP2 C B1002 50.878 97.705 81.511 1.00 29.15 O
ATOM 5 O5' C B1002 51.325 95.667 82.813 1.00 25.19 O
ATOM 6 C5' C B1002 51.075 94.712 83.834 1.00 25.33 C
ATOM 7 C4' C B1002 52.078 93.611 83.748 1.00 25.79 C
ATOM 8 O4' C B1002 51.871 92.861 82.537 1.00 24.40 O
ATOM 9 C3' C B1002 53.504 94.085 83.582 1.00 27.16 C
ATOM 10 O3' C B1002 54.005 94.528 84.840 1.00 30.37 O
ATOM 11 C2' C B1002 54.185 92.820 83.069 1.00 25.39 C
ATOM 12 O2' C B1002 54.448 91.902 84.106 1.00 29.08 O
ATOM 13 C1' C B1002 53.080 92.214 82.201 1.00 24.01 C
ATOM 14 N1 C B1002 53.288 92.301 80.748 1.00 23.66 N
ATOM 15 C2 C B1002 54.131 91.366 80.150 1.00 24.50 C
ATOM 16 O2 C B1002 54.683 90.516 80.866 1.00 24.95 O
ATOM 17 N3 C B1002 54.327 91.411 78.811 1.00 24.19 N
ATOM 18 C4 C B1002 53.719 92.344 78.078 1.00 22.39 C
ATOM 19 N4 C B1002 53.944 92.342 76.765 1.00 23.43 N
ATOM 20 C5 C B1002 52.856 93.317 78.663 1.00 20.29 C
ATOM 21 C6 C B1002 52.672 93.262 79.989 1.00 21.20 C
ATOM 22 P C B1003 55.183 95.608 84.894 1.00 28.88 P
ATOM 23 OP1 C B1003 55.721 95.763 83.524 1.00 34.09 O
ATOM 24 OP2 C B1003 56.075 95.173 85.983 1.00 31.97 O
ATOM 25 O5' C B1003 54.497 96.989 85.312 1.00 30.89 O
TER
ATOM 2 P A A 913 54.197 93.854 71.213 1.00 31.62 P
ATOM 3 OP1 A A 913 53.520 94.303 69.962 1.00 28.68 O
ATOM 4 OP2 A A 913 53.491 93.973 72.518 1.00 28.65 O
ATOM 5 O5' A A 913 54.654 92.347 71.001 1.00 26.82 O
ATOM 6 C5' A A 913 55.394 91.991 69.832 1.00 26.97 C
ATOM 7 C4' A A 913 56.099 90.681 70.034 1.00 26.18 C
ATOM 8 O4' A A 913 57.074 90.795 71.095 1.00 25.22 O
ATOM 9 C3' A A 913 55.219 89.535 70.483 1.00 26.51 C
ATOM 10 O3' A A 913 54.532 88.973 69.381 1.00 29.61 O
ATOM 11 C2' A A 913 56.245 88.586 71.060 1.00 24.76 C
ATOM 12 O2' A A 913 56.988 87.982 70.025 1.00 24.44 O
ATOM 13 C1' A A 913 57.155 89.567 71.792 1.00 23.01 C
ATOM 14 N9 A A 913 56.755 89.795 73.182 1.00 20.70 N
ATOM 15 C8 A A 913 56.053 90.852 73.708 1.00 18.52 C
ATOM 16 N7 A A 913 55.879 90.777 75.002 1.00 17.67 N
ATOM 17 C5 A A 913 56.503 89.587 75.354 1.00 17.41 C
ATOM 18 C6 A A 913 56.668 88.931 76.587 1.00 17.05 C
ATOM 19 N6 A A 913 56.235 89.414 77.746 1.00 17.15 N
ATOM 20 N1 A A 913 57.312 87.748 76.587 1.00 19.46 N
ATOM 21 C2 A A 913 57.773 87.268 75.423 1.00 20.67 C
ATOM 22 N3 A A 913 57.694 87.796 74.207 1.00 19.01 N
ATOM 23 C4 A A 913 57.036 88.968 74.241 1.00 18.22 C
ATOM 24 P U A 914 53.029 88.466 69.568 1.00 29.44 P
ATOM 25 OP1 U A 914 52.478 88.247 68.212 1.00 29.42 O
ATOM 26 OP2 U A 914 52.327 89.386 70.510 1.00 27.34 O
ATOM 27 O5' U A 914 53.209 87.067 70.299 1.00 27.46 O
TER
ATOM 1 O3' U B1001 48.964 96.464 82.546 1.00 26.25 O
ATOM 2 P C B1002 50.463 96.991 82.736 1.00 27.13 P
ATOM 3 OP1 C B1002 50.531 97.670 84.051 1.00 25.54 O
ATOM 4 OP2 C B1002 50.878 97.705 81.511 1.00 29.15 O
ATOM 5 O5' C B1002 51.325 95.667 82.813 1.00 25.19 O
ATOM 6 C5' C B1002 51.075 94.712 83.834 1.00 25.33 C
ATOM 7 C4' C B1002 52.078 93.611 83.748 1.00 25.79 C
ATOM 8 O4' C B1002 51.871 92.861 82.537 1.00 24.40 O
ATOM 9 C3' C B1002 53.504 94.085 83.582 1.00 27.16 C
ATOM 10 O3' C B1002 54.005 94.528 84.840 1.00 30.37 O
ATOM 11 C2' C B1002 54.185 92.820 83.069 1.00 25.39 C
ATOM 12 O2' C B1002 54.448 91.902 84.106 1.00 29.08 O
ATOM 13 C1' C B1002 53.080 92.214 82.201 1.00 24.01 C
ATOM 14 N1 C B1002 53.288 92.301 80.748 1.00 23.66 N
ATOM 15 C2 C B1002 54.131 91.366 80.150 1.00 24.50 C
ATOM 16 O2 C B1002 54.683 90.516 80.866 1.00 24.95 O
ATOM 17 N3 C B1002 54.327 91.411 78.811 1.00 24.19 N
ATOM 18 C4 C B1002 53.719 92.344 78.078 1.00 22.39 C
ATOM 19 N4 C B1002 53.944 92.342 76.765 1.00 23.43 N
ATOM 20 C5 C B1002 52.856 93.317 78.663 1.00 20.29 C
ATOM 21 C6 C B1002 52.672 93.262 79.989 1.00 21.20 C
ATOM 22 P C B1003 55.183 95.608 84.894 1.00 28.88 P
ATOM 23 OP1 C B1003 55.721 95.763 83.524 1.00 34.09 O
ATOM 24 OP2 C B1003 56.075 95.173 85.983 1.00 31.97 O
ATOM 25 O5' C B1003 54.497 96.989 85.312 1.00 30.89 O
TER
Atoms:
OP1: (53.520,94.303,69.962)
OP2: (53.491,93.973,72.518)
C3': (55.219,89.535,70.483)
C1': (57.155,89.567,71.792)
C5': (55.394,91.991,69.832)
O4': (57.074,90.795,71.095)
C8: (56.053,90.852,73.708)
O2': (56.988,87.982,70.025)
C6: (56.668,88.931,76.587)
C5: (56.503,89.587,75.354)
C4: (57.036,88.968,74.241)
P: (54.197,93.854,71.213)
C4': (56.099,90.681,70.034)
C2': (56.245,88.586,71.060)
C2: (57.773,87.268,75.423)
N1: (57.312,87.748,76.587)
N3: (57.694,87.796,74.207)
N6: (56.235,89.414,77.746)
N7: (55.879,90.777,75.002)
N9: (56.755,89.795,73.182)
O5': (54.654,92.347,71.001)
O3': (54.532,88.973,69.381)
OP2: (53.491,93.973,72.518)
C3': (55.219,89.535,70.483)
C1': (57.155,89.567,71.792)
C5': (55.394,91.991,69.832)
O4': (57.074,90.795,71.095)
C8: (56.053,90.852,73.708)
O2': (56.988,87.982,70.025)
C6: (56.668,88.931,76.587)
C5: (56.503,89.587,75.354)
C4: (57.036,88.968,74.241)
P: (54.197,93.854,71.213)
C4': (56.099,90.681,70.034)
C2': (56.245,88.586,71.060)
C2: (57.773,87.268,75.423)
N1: (57.312,87.748,76.587)
N3: (57.694,87.796,74.207)
N6: (56.235,89.414,77.746)
N7: (55.879,90.777,75.002)
N9: (56.755,89.795,73.182)
O5': (54.654,92.347,71.001)
O3': (54.532,88.973,69.381)
C2: (54.131,91.366,80.150)
OP1: (50.531,97.670,84.051)
OP2: (50.878,97.705,81.511)
C4: (53.719,92.344,78.078)
O5': (51.325,95.667,82.813)
C3': (53.504,94.085,83.582)
C1': (53.080,92.214,82.201)
O4': (51.871,92.861,82.537)
C5': (51.075,94.712,83.834)
P: (50.463,96.991,82.736)
O2: (54.683,90.516,80.866)
C4': (52.078,93.611,83.748)
C2': (54.185,92.820,83.069)
O2': (54.448,91.902,84.106)
N1: (53.288,92.301,80.748)
N3: (54.327,91.411,78.811)
N4: (53.944,92.342,76.765)
C6: (52.672,93.262,79.989)
C5: (52.856,93.317,78.663)
O3': (54.005,94.528,84.840)
OP1: (50.531,97.670,84.051)
OP2: (50.878,97.705,81.511)
C4: (53.719,92.344,78.078)
O5': (51.325,95.667,82.813)
C3': (53.504,94.085,83.582)
C1': (53.080,92.214,82.201)
O4': (51.871,92.861,82.537)
C5': (51.075,94.712,83.834)
P: (50.463,96.991,82.736)
O2: (54.683,90.516,80.866)
C4': (52.078,93.611,83.748)
C2': (54.185,92.820,83.069)
O2': (54.448,91.902,84.106)
N1: (53.288,92.301,80.748)
N3: (54.327,91.411,78.811)
N4: (53.944,92.342,76.765)
C6: (52.672,93.262,79.989)
C5: (52.856,93.317,78.663)
O3': (54.005,94.528,84.840)
Image (generated by PyMOL):