Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2443:A2494
Extra
PDB:
ATOM 1 O3' U A2442 -88.472 -59.806 8.369 1.00 0.01 O
ATOM 2 P A A2443 -89.041 -59.877 6.881 1.00 0.01 P
ATOM 3 OP1 A A2443 -90.480 -59.881 6.971 1.00 0.01 O
ATOM 4 OP2 A A2443 -88.373 -60.989 6.209 1.00 0.01 O
ATOM 5 O5' A A2443 -88.558 -58.519 6.258 1.00 0.01 O
ATOM 6 C5' A A2443 -89.411 -57.405 6.194 1.00 0.01 C
ATOM 7 C4' A A2443 -88.635 -56.126 6.114 1.00 0.01 C
ATOM 8 O4' A A2443 -87.747 -56.028 7.236 1.00 0.01 O
ATOM 9 C3' A A2443 -87.707 -55.981 4.946 1.00 0.01 C
ATOM 10 O3' A A2443 -88.357 -55.663 3.743 1.00 0.01 O
ATOM 11 C2' A A2443 -86.783 -54.896 5.436 1.00 0.01 C
ATOM 12 O2' A A2443 -87.432 -53.635 5.407 1.00 0.01 O
ATOM 13 C1' A A2443 -86.613 -55.301 6.880 1.00 0.01 C
ATOM 14 N9 A A2443 -85.432 -56.138 7.087 1.00 0.01 N
ATOM 15 C8 A A2443 -85.396 -57.415 7.498 1.00 0.01 C
ATOM 16 N7 A A2443 -84.199 -57.900 7.629 1.00 0.01 N
ATOM 17 C5 A A2443 -83.370 -56.850 7.289 1.00 0.01 C
ATOM 18 C6 A A2443 -81.965 -56.717 7.217 1.00 0.01 C
ATOM 19 N6 A A2443 -81.099 -57.702 7.501 1.00 0.01 N
ATOM 20 N1 A A2443 -81.465 -55.535 6.834 1.00 0.01 N
ATOM 21 C2 A A2443 -82.316 -54.576 6.552 1.00 0.01 C
ATOM 22 N3 A A2443 -83.630 -54.585 6.581 1.00 0.01 N
ATOM 23 C4 A A2443 -84.121 -55.761 6.959 1.00 0.01 C
ATOM 24 P A A2444 -87.795 -56.262 2.394 1.00 0.01 P
ATOM 25 OP1 A A2444 -88.708 -55.894 1.329 1.00 0.01 O
ATOM 26 OP2 A A2444 -87.553 -57.663 2.642 1.00 0.01 O
ATOM 27 O5' A A2444 -86.434 -55.500 2.210 1.00 0.01 O
TER
ATOM 1 O3' U B2493 -78.280 -67.699 6.724 1.00 0.01 O
ATOM 2 P C B2494 -78.476 -67.485 8.283 1.00 0.01 P
ATOM 3 OP1 C B2494 -77.266 -68.002 8.922 1.00 0.01 O
ATOM 4 OP2 C B2494 -79.758 -68.058 8.651 1.00 0.01 O
ATOM 5 O5' C B2494 -78.531 -65.913 8.418 1.00 0.01 O
ATOM 6 C5' C B2494 -77.428 -65.129 8.025 1.00 0.01 C
ATOM 7 C4' C B2494 -77.338 -63.840 8.798 1.00 0.01 C
ATOM 8 O4' C B2494 -78.430 -62.984 8.449 1.00 0.01 O
ATOM 9 C3' C B2494 -77.365 -63.943 10.324 1.00 0.01 C
ATOM 10 O3' C B2494 -76.051 -64.055 10.849 1.00 0.01 O
ATOM 11 C2' C B2494 -78.075 -62.664 10.777 1.00 0.01 C
ATOM 12 O2' C B2494 -77.142 -61.757 11.306 1.00 0.01 O
ATOM 13 C1' C B2494 -78.644 -62.073 9.480 1.00 0.01 C
ATOM 14 N1 C B2494 -80.076 -61.759 9.539 1.00 0.01 N
ATOM 15 C2 C B2494 -80.423 -60.619 8.840 1.00 0.01 C
ATOM 16 O2 C B2494 -79.526 -59.985 8.290 1.00 0.01 O
ATOM 17 N3 C B2494 -81.697 -60.208 8.791 1.00 0.01 N
ATOM 18 C4 C B2494 -82.615 -60.916 9.402 1.00 0.01 C
ATOM 19 N4 C B2494 -83.845 -60.468 9.314 1.00 0.01 N
ATOM 20 C5 C B2494 -82.321 -62.097 10.125 1.00 0.01 C
ATOM 21 C6 C B2494 -81.037 -62.488 10.160 1.00 0.01 C
ATOM 22 P G B2495 -75.745 -64.829 12.220 1.00 0.01 P
ATOM 23 OP1 G B2495 -76.229 -66.220 12.064 1.00 0.01 O
ATOM 24 OP2 G B2495 -76.278 -64.010 13.299 1.00 0.01 O
ATOM 25 O5' G B2495 -74.163 -64.814 12.306 1.00 0.01 O
TER
ATOM 2 P A A2443 -89.041 -59.877 6.881 1.00 0.01 P
ATOM 3 OP1 A A2443 -90.480 -59.881 6.971 1.00 0.01 O
ATOM 4 OP2 A A2443 -88.373 -60.989 6.209 1.00 0.01 O
ATOM 5 O5' A A2443 -88.558 -58.519 6.258 1.00 0.01 O
ATOM 6 C5' A A2443 -89.411 -57.405 6.194 1.00 0.01 C
ATOM 7 C4' A A2443 -88.635 -56.126 6.114 1.00 0.01 C
ATOM 8 O4' A A2443 -87.747 -56.028 7.236 1.00 0.01 O
ATOM 9 C3' A A2443 -87.707 -55.981 4.946 1.00 0.01 C
ATOM 10 O3' A A2443 -88.357 -55.663 3.743 1.00 0.01 O
ATOM 11 C2' A A2443 -86.783 -54.896 5.436 1.00 0.01 C
ATOM 12 O2' A A2443 -87.432 -53.635 5.407 1.00 0.01 O
ATOM 13 C1' A A2443 -86.613 -55.301 6.880 1.00 0.01 C
ATOM 14 N9 A A2443 -85.432 -56.138 7.087 1.00 0.01 N
ATOM 15 C8 A A2443 -85.396 -57.415 7.498 1.00 0.01 C
ATOM 16 N7 A A2443 -84.199 -57.900 7.629 1.00 0.01 N
ATOM 17 C5 A A2443 -83.370 -56.850 7.289 1.00 0.01 C
ATOM 18 C6 A A2443 -81.965 -56.717 7.217 1.00 0.01 C
ATOM 19 N6 A A2443 -81.099 -57.702 7.501 1.00 0.01 N
ATOM 20 N1 A A2443 -81.465 -55.535 6.834 1.00 0.01 N
ATOM 21 C2 A A2443 -82.316 -54.576 6.552 1.00 0.01 C
ATOM 22 N3 A A2443 -83.630 -54.585 6.581 1.00 0.01 N
ATOM 23 C4 A A2443 -84.121 -55.761 6.959 1.00 0.01 C
ATOM 24 P A A2444 -87.795 -56.262 2.394 1.00 0.01 P
ATOM 25 OP1 A A2444 -88.708 -55.894 1.329 1.00 0.01 O
ATOM 26 OP2 A A2444 -87.553 -57.663 2.642 1.00 0.01 O
ATOM 27 O5' A A2444 -86.434 -55.500 2.210 1.00 0.01 O
TER
ATOM 1 O3' U B2493 -78.280 -67.699 6.724 1.00 0.01 O
ATOM 2 P C B2494 -78.476 -67.485 8.283 1.00 0.01 P
ATOM 3 OP1 C B2494 -77.266 -68.002 8.922 1.00 0.01 O
ATOM 4 OP2 C B2494 -79.758 -68.058 8.651 1.00 0.01 O
ATOM 5 O5' C B2494 -78.531 -65.913 8.418 1.00 0.01 O
ATOM 6 C5' C B2494 -77.428 -65.129 8.025 1.00 0.01 C
ATOM 7 C4' C B2494 -77.338 -63.840 8.798 1.00 0.01 C
ATOM 8 O4' C B2494 -78.430 -62.984 8.449 1.00 0.01 O
ATOM 9 C3' C B2494 -77.365 -63.943 10.324 1.00 0.01 C
ATOM 10 O3' C B2494 -76.051 -64.055 10.849 1.00 0.01 O
ATOM 11 C2' C B2494 -78.075 -62.664 10.777 1.00 0.01 C
ATOM 12 O2' C B2494 -77.142 -61.757 11.306 1.00 0.01 O
ATOM 13 C1' C B2494 -78.644 -62.073 9.480 1.00 0.01 C
ATOM 14 N1 C B2494 -80.076 -61.759 9.539 1.00 0.01 N
ATOM 15 C2 C B2494 -80.423 -60.619 8.840 1.00 0.01 C
ATOM 16 O2 C B2494 -79.526 -59.985 8.290 1.00 0.01 O
ATOM 17 N3 C B2494 -81.697 -60.208 8.791 1.00 0.01 N
ATOM 18 C4 C B2494 -82.615 -60.916 9.402 1.00 0.01 C
ATOM 19 N4 C B2494 -83.845 -60.468 9.314 1.00 0.01 N
ATOM 20 C5 C B2494 -82.321 -62.097 10.125 1.00 0.01 C
ATOM 21 C6 C B2494 -81.037 -62.488 10.160 1.00 0.01 C
ATOM 22 P G B2495 -75.745 -64.829 12.220 1.00 0.01 P
ATOM 23 OP1 G B2495 -76.229 -66.220 12.064 1.00 0.01 O
ATOM 24 OP2 G B2495 -76.278 -64.010 13.299 1.00 0.01 O
ATOM 25 O5' G B2495 -74.163 -64.814 12.306 1.00 0.01 O
TER
Atoms:
OP1: (-90.480,-59.881,6.971)
OP2: (-88.373,-60.989,6.209)
C3': (-87.707,-55.981,4.946)
C1': (-86.613,-55.301,6.880)
C5': (-89.411,-57.405,6.194)
O4': (-87.747,-56.028,7.236)
C8: (-85.396,-57.415,7.498)
O2': (-87.432,-53.635,5.407)
C6: (-81.965,-56.717,7.217)
C5: (-83.370,-56.850,7.289)
C4: (-84.121,-55.761,6.959)
P: (-89.041,-59.877,6.881)
C4': (-88.635,-56.126,6.114)
C2': (-86.783,-54.896,5.436)
C2: (-82.316,-54.576,6.552)
N1: (-81.465,-55.535,6.834)
N3: (-83.630,-54.585,6.581)
N6: (-81.099,-57.702,7.501)
N7: (-84.199,-57.900,7.629)
N9: (-85.432,-56.138,7.087)
O5': (-88.558,-58.519,6.258)
O3': (-88.357,-55.663,3.743)
OP2: (-88.373,-60.989,6.209)
C3': (-87.707,-55.981,4.946)
C1': (-86.613,-55.301,6.880)
C5': (-89.411,-57.405,6.194)
O4': (-87.747,-56.028,7.236)
C8: (-85.396,-57.415,7.498)
O2': (-87.432,-53.635,5.407)
C6: (-81.965,-56.717,7.217)
C5: (-83.370,-56.850,7.289)
C4: (-84.121,-55.761,6.959)
P: (-89.041,-59.877,6.881)
C4': (-88.635,-56.126,6.114)
C2': (-86.783,-54.896,5.436)
C2: (-82.316,-54.576,6.552)
N1: (-81.465,-55.535,6.834)
N3: (-83.630,-54.585,6.581)
N6: (-81.099,-57.702,7.501)
N7: (-84.199,-57.900,7.629)
N9: (-85.432,-56.138,7.087)
O5': (-88.558,-58.519,6.258)
O3': (-88.357,-55.663,3.743)
C2: (-80.423,-60.619,8.840)
OP1: (-77.266,-68.002,8.922)
OP2: (-79.758,-68.058,8.651)
C4: (-82.615,-60.916,9.402)
O5': (-78.531,-65.913,8.418)
C3': (-77.365,-63.943,10.324)
C1': (-78.644,-62.073,9.480)
O4': (-78.430,-62.984,8.449)
C5': (-77.428,-65.129,8.025)
P: (-78.476,-67.485,8.283)
O2: (-79.526,-59.985,8.290)
C4': (-77.338,-63.840,8.798)
C2': (-78.075,-62.664,10.777)
O2': (-77.142,-61.757,11.306)
N1: (-80.076,-61.759,9.539)
N3: (-81.697,-60.208,8.791)
N4: (-83.845,-60.468,9.314)
C6: (-81.037,-62.488,10.160)
C5: (-82.321,-62.097,10.125)
O3': (-76.051,-64.055,10.849)
OP1: (-77.266,-68.002,8.922)
OP2: (-79.758,-68.058,8.651)
C4: (-82.615,-60.916,9.402)
O5': (-78.531,-65.913,8.418)
C3': (-77.365,-63.943,10.324)
C1': (-78.644,-62.073,9.480)
O4': (-78.430,-62.984,8.449)
C5': (-77.428,-65.129,8.025)
P: (-78.476,-67.485,8.283)
O2: (-79.526,-59.985,8.290)
C4': (-77.338,-63.840,8.798)
C2': (-78.075,-62.664,10.777)
O2': (-77.142,-61.757,11.306)
N1: (-80.076,-61.759,9.539)
N3: (-81.697,-60.208,8.791)
N4: (-83.845,-60.468,9.314)
C6: (-81.037,-62.488,10.160)
C5: (-82.321,-62.097,10.125)
O3': (-76.051,-64.055,10.849)
Image (generated by PyMOL):