Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIZ:A39:A38
Extra
PDB:
ATOM 1 O3' A A 38 -6.990 64.279 -2.420 1.00 61.29 O
ATOM 2 P U A 39 -6.905 63.057 -3.459 1.00 60.47 P
ATOM 3 OP1 U A 39 -5.626 63.140 -4.204 1.00 60.52 O
ATOM 4 OP2 U A 39 -8.193 63.008 -4.191 1.00 60.44 O
ATOM 5 O5' U A 39 -6.860 61.791 -2.487 1.00 59.64 O
ATOM 6 C5' U A 39 -6.320 60.546 -2.906 1.00 58.60 C
ATOM 7 C4' U A 39 -6.871 59.432 -2.028 1.00 57.88 C
ATOM 8 O4' U A 39 -7.313 59.952 -0.740 1.00 58.06 O
ATOM 9 C3' U A 39 -8.082 58.688 -2.584 1.00 56.94 C
ATOM 10 O3' U A 39 -8.068 57.338 -2.098 1.00 55.26 O
ATOM 11 C2' U A 39 -9.236 59.497 -1.991 1.00 57.23 C
ATOM 12 O2' U A 39 -10.461 58.794 -2.012 1.00 56.97 O
ATOM 13 C1' U A 39 -8.696 59.675 -0.570 1.00 57.91 C
ATOM 14 N1 U A 39 -9.326 60.740 0.304 1.00 57.97 N
ATOM 15 C2 U A 39 -10.163 60.359 1.347 1.00 58.09 C
ATOM 16 O2 U A 39 -10.447 59.201 1.609 1.00 58.28 O
ATOM 17 N3 U A 39 -10.677 61.394 2.092 1.00 57.90 N
ATOM 18 C4 U A 39 -10.441 62.744 1.911 1.00 58.13 C
ATOM 19 O4 U A 39 -10.973 63.555 2.662 1.00 58.19 O
ATOM 20 C5 U A 39 -9.559 63.067 0.815 1.00 58.29 C
ATOM 21 C6 U A 39 -9.044 62.077 0.072 1.00 58.11 C
ATOM 22 P C A 40 -7.163 56.192 -2.762 1.00 53.76 P
ATOM 23 OP1 C A 40 -6.525 56.748 -3.979 1.00 53.65 O
ATOM 24 OP2 C A 40 -8.026 54.996 -2.874 1.00 53.68 O
ATOM 25 O5' C A 40 -6.000 55.913 -1.692 1.00 51.83 O
TER
ATOM 1 O3' C B 37 -1.317 65.167 -0.281 1.00 59.96 O
ATOM 2 P A B 38 -2.118 65.867 -1.484 1.00 60.66 P
ATOM 3 OP1 A B 38 -1.129 66.202 -2.530 1.00 60.34 O
ATOM 4 OP2 A B 38 -2.973 66.944 -0.937 1.00 60.50 O
ATOM 5 O5' A B 38 -3.043 64.692 -2.068 1.00 61.45 O
ATOM 6 C5' A B 38 -3.627 63.664 -1.251 1.00 61.75 C
ATOM 7 C4' A B 38 -5.087 63.944 -0.924 1.00 62.14 C
ATOM 8 O4' A B 38 -5.201 64.504 0.408 1.00 62.65 O
ATOM 9 C3' A B 38 -5.826 64.907 -1.864 1.00 62.02 C
ATOM 10 O3' A B 38 -6.990 64.279 -2.420 1.00 61.29 O
ATOM 11 C2' A B 38 -6.182 66.095 -0.966 1.00 62.56 C
ATOM 12 O2' A B 38 -7.403 66.733 -1.296 1.00 62.14 O
ATOM 13 C1' A B 38 -6.279 65.415 0.396 1.00 63.38 C
ATOM 14 N9 A B 38 -6.159 66.320 1.538 1.00 64.23 N
ATOM 15 C8 A B 38 -5.143 67.205 1.784 1.00 64.52 C
ATOM 16 N7 A B 38 -5.296 67.896 2.889 1.00 64.82 N
ATOM 17 C5 A B 38 -6.493 67.431 3.411 1.00 64.87 C
ATOM 18 C6 A B 38 -7.219 67.763 4.580 1.00 64.85 C
ATOM 19 N6 A B 38 -6.807 68.683 5.461 1.00 64.45 N
ATOM 20 N1 A B 38 -8.386 67.112 4.809 1.00 64.88 N
ATOM 21 C2 A B 38 -8.798 66.189 3.926 1.00 64.77 C
ATOM 22 N3 A B 38 -8.202 65.795 2.796 1.00 64.76 N
ATOM 23 C4 A B 38 -7.043 66.458 2.591 1.00 64.70 C
ATOM 24 P U B 39 -6.905 63.057 -3.459 1.00 60.47 P
ATOM 25 OP1 U B 39 -5.626 63.140 -4.204 1.00 60.52 O
ATOM 26 OP2 U B 39 -8.193 63.008 -4.191 1.00 60.44 O
ATOM 27 O5' U B 39 -6.860 61.791 -2.487 1.00 59.64 O
TER
ATOM 2 P U A 39 -6.905 63.057 -3.459 1.00 60.47 P
ATOM 3 OP1 U A 39 -5.626 63.140 -4.204 1.00 60.52 O
ATOM 4 OP2 U A 39 -8.193 63.008 -4.191 1.00 60.44 O
ATOM 5 O5' U A 39 -6.860 61.791 -2.487 1.00 59.64 O
ATOM 6 C5' U A 39 -6.320 60.546 -2.906 1.00 58.60 C
ATOM 7 C4' U A 39 -6.871 59.432 -2.028 1.00 57.88 C
ATOM 8 O4' U A 39 -7.313 59.952 -0.740 1.00 58.06 O
ATOM 9 C3' U A 39 -8.082 58.688 -2.584 1.00 56.94 C
ATOM 10 O3' U A 39 -8.068 57.338 -2.098 1.00 55.26 O
ATOM 11 C2' U A 39 -9.236 59.497 -1.991 1.00 57.23 C
ATOM 12 O2' U A 39 -10.461 58.794 -2.012 1.00 56.97 O
ATOM 13 C1' U A 39 -8.696 59.675 -0.570 1.00 57.91 C
ATOM 14 N1 U A 39 -9.326 60.740 0.304 1.00 57.97 N
ATOM 15 C2 U A 39 -10.163 60.359 1.347 1.00 58.09 C
ATOM 16 O2 U A 39 -10.447 59.201 1.609 1.00 58.28 O
ATOM 17 N3 U A 39 -10.677 61.394 2.092 1.00 57.90 N
ATOM 18 C4 U A 39 -10.441 62.744 1.911 1.00 58.13 C
ATOM 19 O4 U A 39 -10.973 63.555 2.662 1.00 58.19 O
ATOM 20 C5 U A 39 -9.559 63.067 0.815 1.00 58.29 C
ATOM 21 C6 U A 39 -9.044 62.077 0.072 1.00 58.11 C
ATOM 22 P C A 40 -7.163 56.192 -2.762 1.00 53.76 P
ATOM 23 OP1 C A 40 -6.525 56.748 -3.979 1.00 53.65 O
ATOM 24 OP2 C A 40 -8.026 54.996 -2.874 1.00 53.68 O
ATOM 25 O5' C A 40 -6.000 55.913 -1.692 1.00 51.83 O
TER
ATOM 1 O3' C B 37 -1.317 65.167 -0.281 1.00 59.96 O
ATOM 2 P A B 38 -2.118 65.867 -1.484 1.00 60.66 P
ATOM 3 OP1 A B 38 -1.129 66.202 -2.530 1.00 60.34 O
ATOM 4 OP2 A B 38 -2.973 66.944 -0.937 1.00 60.50 O
ATOM 5 O5' A B 38 -3.043 64.692 -2.068 1.00 61.45 O
ATOM 6 C5' A B 38 -3.627 63.664 -1.251 1.00 61.75 C
ATOM 7 C4' A B 38 -5.087 63.944 -0.924 1.00 62.14 C
ATOM 8 O4' A B 38 -5.201 64.504 0.408 1.00 62.65 O
ATOM 9 C3' A B 38 -5.826 64.907 -1.864 1.00 62.02 C
ATOM 10 O3' A B 38 -6.990 64.279 -2.420 1.00 61.29 O
ATOM 11 C2' A B 38 -6.182 66.095 -0.966 1.00 62.56 C
ATOM 12 O2' A B 38 -7.403 66.733 -1.296 1.00 62.14 O
ATOM 13 C1' A B 38 -6.279 65.415 0.396 1.00 63.38 C
ATOM 14 N9 A B 38 -6.159 66.320 1.538 1.00 64.23 N
ATOM 15 C8 A B 38 -5.143 67.205 1.784 1.00 64.52 C
ATOM 16 N7 A B 38 -5.296 67.896 2.889 1.00 64.82 N
ATOM 17 C5 A B 38 -6.493 67.431 3.411 1.00 64.87 C
ATOM 18 C6 A B 38 -7.219 67.763 4.580 1.00 64.85 C
ATOM 19 N6 A B 38 -6.807 68.683 5.461 1.00 64.45 N
ATOM 20 N1 A B 38 -8.386 67.112 4.809 1.00 64.88 N
ATOM 21 C2 A B 38 -8.798 66.189 3.926 1.00 64.77 C
ATOM 22 N3 A B 38 -8.202 65.795 2.796 1.00 64.76 N
ATOM 23 C4 A B 38 -7.043 66.458 2.591 1.00 64.70 C
ATOM 24 P U B 39 -6.905 63.057 -3.459 1.00 60.47 P
ATOM 25 OP1 U B 39 -5.626 63.140 -4.204 1.00 60.52 O
ATOM 26 OP2 U B 39 -8.193 63.008 -4.191 1.00 60.44 O
ATOM 27 O5' U B 39 -6.860 61.791 -2.487 1.00 59.64 O
TER
Atoms:
C4: (-10.441,62.744,1.911)
N3: (-10.677,61.394,2.092)
OP1: (-5.626,63.140,-4.204)
OP2: (-8.193,63.008,-4.191)
C2: (-10.163,60.359,1.347)
C1': (-8.696,59.675,-0.570)
C3': (-8.082,58.688,-2.584)
O5': (-6.860,61.791,-2.487)
O4': (-7.313,59.952,-0.740)
C5': (-6.320,60.546,-2.906)
P: (-6.905,63.057,-3.459)
C4': (-6.871,59.432,-2.028)
C2': (-9.236,59.497,-1.991)
O2': (-10.461,58.794,-2.012)
N1: (-9.326,60.740,0.304)
O4: (-10.973,63.555,2.662)
O2: (-10.447,59.201,1.609)
C6: (-9.044,62.077,0.072)
C5: (-9.559,63.067,0.815)
O3': (-8.068,57.338,-2.098)
N3: (-10.677,61.394,2.092)
OP1: (-5.626,63.140,-4.204)
OP2: (-8.193,63.008,-4.191)
C2: (-10.163,60.359,1.347)
C1': (-8.696,59.675,-0.570)
C3': (-8.082,58.688,-2.584)
O5': (-6.860,61.791,-2.487)
O4': (-7.313,59.952,-0.740)
C5': (-6.320,60.546,-2.906)
P: (-6.905,63.057,-3.459)
C4': (-6.871,59.432,-2.028)
C2': (-9.236,59.497,-1.991)
O2': (-10.461,58.794,-2.012)
N1: (-9.326,60.740,0.304)
O4: (-10.973,63.555,2.662)
O2: (-10.447,59.201,1.609)
C6: (-9.044,62.077,0.072)
C5: (-9.559,63.067,0.815)
O3': (-8.068,57.338,-2.098)
OP1: (-1.129,66.202,-2.530)
OP2: (-2.973,66.944,-0.937)
C3': (-5.826,64.907,-1.864)
C1': (-6.279,65.415,0.396)
C5': (-3.627,63.664,-1.251)
O4': (-5.201,64.504,0.408)
C8: (-5.143,67.205,1.784)
O2': (-7.403,66.733,-1.296)
C6: (-7.219,67.763,4.580)
C5: (-6.493,67.431,3.411)
C4: (-7.043,66.458,2.591)
P: (-2.118,65.867,-1.484)
C4': (-5.087,63.944,-0.924)
C2': (-6.182,66.095,-0.966)
C2: (-8.798,66.189,3.926)
N1: (-8.386,67.112,4.809)
N3: (-8.202,65.795,2.796)
N6: (-6.807,68.683,5.461)
N7: (-5.296,67.896,2.889)
N9: (-6.159,66.320,1.538)
O5': (-3.043,64.692,-2.068)
O3': (-6.990,64.279,-2.420)
OP2: (-2.973,66.944,-0.937)
C3': (-5.826,64.907,-1.864)
C1': (-6.279,65.415,0.396)
C5': (-3.627,63.664,-1.251)
O4': (-5.201,64.504,0.408)
C8: (-5.143,67.205,1.784)
O2': (-7.403,66.733,-1.296)
C6: (-7.219,67.763,4.580)
C5: (-6.493,67.431,3.411)
C4: (-7.043,66.458,2.591)
P: (-2.118,65.867,-1.484)
C4': (-5.087,63.944,-0.924)
C2': (-6.182,66.095,-0.966)
C2: (-8.798,66.189,3.926)
N1: (-8.386,67.112,4.809)
N3: (-8.202,65.795,2.796)
N6: (-6.807,68.683,5.461)
N7: (-5.296,67.896,2.889)
N9: (-6.159,66.320,1.538)
O5': (-3.043,64.692,-2.068)
O3': (-6.990,64.279,-2.420)
Image (generated by PyMOL):