ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DS7:A10:A9

Extra

PDB:
ATOM 1 O3' A A 9 -10.179 7.087 -23.081 1.00 28.57 O
ATOM 2 P U A 10 -9.931 6.629 -24.573 1.00 26.97 P
ATOM 3 OP1 U A 10 -8.599 7.147 -24.939 1.00 29.45 O
ATOM 4 OP2 U A 10 -11.084 7.048 -25.381 1.00 29.34 O
ATOM 5 O5' U A 10 -10.064 5.033 -24.531 1.00 29.94 O
ATOM 6 C5' U A 10 -8.958 4.160 -24.614 1.00 29.63 C
ATOM 7 C4' U A 10 -9.342 2.823 -24.002 1.00 28.55 C
ATOM 8 O4' U A 10 -9.692 3.038 -22.599 1.00 27.15 O
ATOM 9 C3' U A 10 -10.597 2.139 -24.583 1.00 27.40 C
ATOM 10 O3' U A 10 -10.295 1.346 -25.740 1.00 26.41 O
ATOM 11 C2' U A 10 -11.009 1.242 -23.418 1.00 27.12 C
ATOM 12 O2' U A 10 -10.069 0.207 -23.257 1.00 28.61 O
ATOM 13 C1' U A 10 -10.762 2.165 -22.238 1.00 27.49 C
ATOM 14 N1 U A 10 -11.958 2.927 -21.879 1.00 26.10 N
ATOM 15 C2 U A 10 -12.972 2.218 -21.256 1.00 25.78 C
ATOM 16 O2 U A 10 -12.894 1.037 -21.034 1.00 24.93 O
ATOM 17 N3 U A 10 -14.096 2.945 -20.942 1.00 24.78 N
ATOM 18 C4 U A 10 -14.316 4.249 -21.205 1.00 26.23 C
ATOM 19 O4 U A 10 -15.392 4.739 -20.930 1.00 26.10 O
ATOM 20 C5 U A 10 -13.224 4.921 -21.845 1.00 26.83 C
ATOM 21 C6 U A 10 -12.103 4.249 -22.143 1.00 27.64 C
ATOM 22 P C A 11 -11.416 1.140 -26.874 1.00 26.04 P
ATOM 23 OP1 C A 11 -10.787 0.706 -28.129 1.00 26.13 O
ATOM 24 OP2 C A 11 -12.129 2.477 -26.875 1.00 24.68 O
ATOM 25 O5' C A 11 -12.334 -0.043 -26.284 1.00 25.03 O
TER

ATOM 1 O3' A B 8 -5.300 3.997 -21.534 1.00 29.40 O
ATOM 2 P A B 9 -5.481 5.561 -21.312 1.00 26.79 P
ATOM 3 OP1 A B 9 -4.530 6.300 -22.223 1.00 28.01 O
ATOM 4 OP2 A B 9 -5.549 5.891 -19.890 1.00 27.20 O
ATOM 5 O5' A B 9 -6.942 5.767 -21.962 1.00 28.03 O
ATOM 6 C5' A B 9 -8.080 5.419 -21.244 1.00 27.22 C
ATOM 7 C4' A B 9 -8.970 6.624 -21.067 1.00 26.93 C
ATOM 8 O4' A B 9 -8.485 7.473 -19.993 1.00 26.18 O
ATOM 9 C3' A B 9 -9.110 7.549 -22.277 1.00 25.72 C
ATOM 10 O3' A B 9 -10.179 7.087 -23.081 1.00 28.57 O
ATOM 11 C2' A B 9 -9.595 8.835 -21.620 1.00 25.55 C
ATOM 12 O2' A B 9 -10.922 8.714 -21.286 1.00 25.53 O
ATOM 13 C1' A B 9 -8.839 8.833 -20.286 1.00 26.72 C
ATOM 14 N9 A B 9 -7.611 9.642 -20.382 1.00 25.06 N
ATOM 15 C8 A B 9 -6.278 9.230 -20.388 1.00 25.74 C
ATOM 16 N7 A B 9 -5.421 10.230 -20.420 1.00 22.57 N
ATOM 17 C5 A B 9 -6.231 11.373 -20.447 1.00 23.34 C
ATOM 18 C6 A B 9 -5.931 12.777 -20.474 1.00 23.74 C
ATOM 19 N6 A B 9 -4.689 13.290 -20.388 1.00 24.51 N
ATOM 20 N1 A B 9 -6.967 13.637 -20.548 1.00 23.26 N
ATOM 21 C2 A B 9 -8.261 13.125 -20.550 1.00 23.62 C
ATOM 22 N3 A B 9 -8.664 11.837 -20.496 1.00 23.07 N
ATOM 23 C4 A B 9 -7.586 11.014 -20.445 1.00 24.27 C
ATOM 24 P U B 10 -9.931 6.629 -24.573 1.00 26.97 P
ATOM 25 OP1 U B 10 -8.599 7.147 -24.939 1.00 29.45 O
ATOM 26 OP2 U B 10 -11.084 7.048 -25.381 1.00 29.34 O
ATOM 27 O5' U B 10 -10.064 5.033 -24.531 1.00 29.94 O
TER

Atoms:
C4: (-14.316,4.249,-21.205)
N3: (-14.096,2.945,-20.942)
OP1: (-8.599,7.147,-24.939)
OP2: (-11.084,7.048,-25.381)
C2: (-12.972,2.218,-21.256)
C1': (-10.762,2.165,-22.238)
C3': (-10.597,2.139,-24.583)
O5': (-10.064,5.033,-24.531)
O4': (-9.692,3.038,-22.599)
C5': (-8.958,4.160,-24.614)
P: (-9.931,6.629,-24.573)
C4': (-9.342,2.823,-24.002)
C2': (-11.009,1.242,-23.418)
O2': (-10.069,0.207,-23.257)
N1: (-11.958,2.927,-21.879)
O4: (-15.392,4.739,-20.930)
O2: (-12.894,1.037,-21.034)
C6: (-12.103,4.249,-22.143)
C5: (-13.224,4.921,-21.845)
O3': (-10.295,1.346,-25.740)
OP1: (-4.530,6.300,-22.223)
OP2: (-5.549,5.891,-19.890)
C3': (-9.110,7.549,-22.277)
C1': (-8.839,8.833,-20.286)
C5': (-8.080,5.419,-21.244)
O4': (-8.485,7.473,-19.993)
C8: (-6.278,9.230,-20.388)
O2': (-10.922,8.714,-21.286)
C6: (-5.931,12.777,-20.474)
C5: (-6.231,11.373,-20.447)
C4: (-7.586,11.014,-20.445)
P: (-5.481,5.561,-21.312)
C4': (-8.970,6.624,-21.067)
C2': (-9.595,8.835,-21.620)
C2: (-8.261,13.125,-20.550)
N1: (-6.967,13.637,-20.548)
N3: (-8.664,11.837,-20.496)
N6: (-4.689,13.290,-20.388)
N7: (-5.421,10.230,-20.420)
N9: (-7.611,9.642,-20.382)
O5': (-6.942,5.767,-21.962)
O3': (-10.179,7.087,-23.081)
Image (generated by PyMOL):
PyMOL image
show in jmol