Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A478:A474
Extra
PDB:
ATOM 1 O3' A A 477 -28.528-101.079 42.730 1.00 0.01 O
ATOM 2 P A A 478 -28.208 -99.726 41.958 1.00 0.01 P
ATOM 3 OP1 A A 478 -27.421 -98.877 42.878 1.00 0.01 O
ATOM 4 OP2 A A 478 -29.492 -99.202 41.449 1.00 0.01 O
ATOM 5 O5' A A 478 -27.303-100.241 40.747 1.00 0.01 O
ATOM 6 C5' A A 478 -26.326 -99.399 40.177 1.00 0.01 C
ATOM 7 C4' A A 478 -25.597-100.034 39.025 1.00 0.01 C
ATOM 8 O4' A A 478 -26.553-100.675 38.144 1.00 0.01 O
ATOM 9 C3' A A 478 -24.859 -99.031 38.145 1.00 0.01 C
ATOM 10 O3' A A 478 -23.748 -99.639 37.493 1.00 0.01 O
ATOM 11 C2' A A 478 -25.889 -98.753 37.088 1.00 0.01 C
ATOM 12 O2' A A 478 -25.370 -98.168 35.920 1.00 0.01 O
ATOM 13 C1' A A 478 -26.353-100.167 36.849 1.00 0.01 C
ATOM 14 N9 A A 478 -27.572-100.298 36.058 1.00 0.01 N
ATOM 15 C8 A A 478 -28.738 -99.615 36.138 1.00 0.01 C
ATOM 16 N7 A A 478 -29.621 -99.974 35.243 1.00 0.01 N
ATOM 17 C5 A A 478 -28.991-100.947 34.521 1.00 0.01 C
ATOM 18 C6 A A 478 -29.413-101.713 33.449 1.00 0.01 C
ATOM 19 N6 A A 478 -30.613-101.575 32.908 1.00 0.01 N
ATOM 20 N1 A A 478 -28.569-102.626 32.951 1.00 0.01 N
ATOM 21 C2 A A 478 -27.370-102.730 33.512 1.00 0.01 C
ATOM 22 N3 A A 478 -26.872-102.050 34.527 1.00 0.01 N
ATOM 23 C4 A A 478 -27.737-101.156 35.000 1.00 0.01 C
ATOM 24 P A A 479 -22.759-100.646 38.229 1.00 0.01 P
ATOM 25 OP1 A A 479 -22.900-100.442 39.669 1.00 0.01 O
ATOM 26 OP2 A A 479 -21.434-100.451 37.615 1.00 0.01 O
ATOM 27 O5' A A 479 -23.348-102.063 37.820 1.00 0.01 O
TER
ATOM 1 O3' G B 473 -39.186 -95.032 36.292 1.00 0.01 O
ATOM 2 P C B 474 -37.680 -95.522 36.009 1.00 0.01 P
ATOM 3 OP1 C B 474 -37.060 -95.773 37.309 1.00 0.01 O
ATOM 4 OP2 C B 474 -37.071 -94.523 35.113 1.00 0.01 O
ATOM 5 O5' C B 474 -37.863 -96.910 35.247 1.00 0.01 O
ATOM 6 C5' C B 474 -38.058 -96.967 33.846 1.00 0.01 C
ATOM 7 C4' C B 474 -37.331 -98.134 33.229 1.00 0.01 C
ATOM 8 O4' C B 474 -35.993 -97.740 32.895 1.00 0.01 O
ATOM 9 C3' C B 474 -37.185 -99.357 34.101 1.00 0.01 C
ATOM 10 O3' C B 474 -38.272-100.239 33.932 1.00 0.01 O
ATOM 11 C2' C B 474 -35.849 -99.958 33.676 1.00 0.01 C
ATOM 12 O2' C B 474 -36.009-100.820 32.573 1.00 0.01 O
ATOM 13 C1' C B 474 -35.081 -98.748 33.204 1.00 0.01 C
ATOM 14 N1 C B 474 -34.166 -98.228 34.209 1.00 0.04 N
ATOM 15 C2 C B 474 -32.921 -98.800 34.345 1.00 0.04 C
ATOM 16 O2 C B 474 -32.698 -99.757 33.622 1.00 0.04 O
ATOM 17 N3 C B 474 -32.046 -98.303 35.250 1.00 0.04 N
ATOM 18 C4 C B 474 -32.385 -97.246 35.978 1.00 0.04 C
ATOM 19 N4 C B 474 -31.516 -96.753 36.857 1.00 0.04 N
ATOM 20 C5 C B 474 -33.648 -96.621 35.837 1.00 0.04 C
ATOM 21 C6 C B 474 -34.502 -97.123 34.936 1.00 0.04 C
ATOM 22 P G B 475 -39.029-100.857 35.191 1.00 0.01 P
ATOM 23 OP1 G B 475 -40.103-101.710 34.675 1.00 0.01 O
ATOM 24 OP2 G B 475 -39.370 -99.734 36.091 1.00 0.01 O
ATOM 25 O5' G B 475 -37.918-101.756 35.849 1.00 0.01 O
TER
ATOM 2 P A A 478 -28.208 -99.726 41.958 1.00 0.01 P
ATOM 3 OP1 A A 478 -27.421 -98.877 42.878 1.00 0.01 O
ATOM 4 OP2 A A 478 -29.492 -99.202 41.449 1.00 0.01 O
ATOM 5 O5' A A 478 -27.303-100.241 40.747 1.00 0.01 O
ATOM 6 C5' A A 478 -26.326 -99.399 40.177 1.00 0.01 C
ATOM 7 C4' A A 478 -25.597-100.034 39.025 1.00 0.01 C
ATOM 8 O4' A A 478 -26.553-100.675 38.144 1.00 0.01 O
ATOM 9 C3' A A 478 -24.859 -99.031 38.145 1.00 0.01 C
ATOM 10 O3' A A 478 -23.748 -99.639 37.493 1.00 0.01 O
ATOM 11 C2' A A 478 -25.889 -98.753 37.088 1.00 0.01 C
ATOM 12 O2' A A 478 -25.370 -98.168 35.920 1.00 0.01 O
ATOM 13 C1' A A 478 -26.353-100.167 36.849 1.00 0.01 C
ATOM 14 N9 A A 478 -27.572-100.298 36.058 1.00 0.01 N
ATOM 15 C8 A A 478 -28.738 -99.615 36.138 1.00 0.01 C
ATOM 16 N7 A A 478 -29.621 -99.974 35.243 1.00 0.01 N
ATOM 17 C5 A A 478 -28.991-100.947 34.521 1.00 0.01 C
ATOM 18 C6 A A 478 -29.413-101.713 33.449 1.00 0.01 C
ATOM 19 N6 A A 478 -30.613-101.575 32.908 1.00 0.01 N
ATOM 20 N1 A A 478 -28.569-102.626 32.951 1.00 0.01 N
ATOM 21 C2 A A 478 -27.370-102.730 33.512 1.00 0.01 C
ATOM 22 N3 A A 478 -26.872-102.050 34.527 1.00 0.01 N
ATOM 23 C4 A A 478 -27.737-101.156 35.000 1.00 0.01 C
ATOM 24 P A A 479 -22.759-100.646 38.229 1.00 0.01 P
ATOM 25 OP1 A A 479 -22.900-100.442 39.669 1.00 0.01 O
ATOM 26 OP2 A A 479 -21.434-100.451 37.615 1.00 0.01 O
ATOM 27 O5' A A 479 -23.348-102.063 37.820 1.00 0.01 O
TER
ATOM 1 O3' G B 473 -39.186 -95.032 36.292 1.00 0.01 O
ATOM 2 P C B 474 -37.680 -95.522 36.009 1.00 0.01 P
ATOM 3 OP1 C B 474 -37.060 -95.773 37.309 1.00 0.01 O
ATOM 4 OP2 C B 474 -37.071 -94.523 35.113 1.00 0.01 O
ATOM 5 O5' C B 474 -37.863 -96.910 35.247 1.00 0.01 O
ATOM 6 C5' C B 474 -38.058 -96.967 33.846 1.00 0.01 C
ATOM 7 C4' C B 474 -37.331 -98.134 33.229 1.00 0.01 C
ATOM 8 O4' C B 474 -35.993 -97.740 32.895 1.00 0.01 O
ATOM 9 C3' C B 474 -37.185 -99.357 34.101 1.00 0.01 C
ATOM 10 O3' C B 474 -38.272-100.239 33.932 1.00 0.01 O
ATOM 11 C2' C B 474 -35.849 -99.958 33.676 1.00 0.01 C
ATOM 12 O2' C B 474 -36.009-100.820 32.573 1.00 0.01 O
ATOM 13 C1' C B 474 -35.081 -98.748 33.204 1.00 0.01 C
ATOM 14 N1 C B 474 -34.166 -98.228 34.209 1.00 0.04 N
ATOM 15 C2 C B 474 -32.921 -98.800 34.345 1.00 0.04 C
ATOM 16 O2 C B 474 -32.698 -99.757 33.622 1.00 0.04 O
ATOM 17 N3 C B 474 -32.046 -98.303 35.250 1.00 0.04 N
ATOM 18 C4 C B 474 -32.385 -97.246 35.978 1.00 0.04 C
ATOM 19 N4 C B 474 -31.516 -96.753 36.857 1.00 0.04 N
ATOM 20 C5 C B 474 -33.648 -96.621 35.837 1.00 0.04 C
ATOM 21 C6 C B 474 -34.502 -97.123 34.936 1.00 0.04 C
ATOM 22 P G B 475 -39.029-100.857 35.191 1.00 0.01 P
ATOM 23 OP1 G B 475 -40.103-101.710 34.675 1.00 0.01 O
ATOM 24 OP2 G B 475 -39.370 -99.734 36.091 1.00 0.01 O
ATOM 25 O5' G B 475 -37.918-101.756 35.849 1.00 0.01 O
TER
Atoms:
OP1: (-27.421,-98.877,42.878)
OP2: (-29.492,-99.202,41.449)
C3': (-24.859,-99.031,38.145)
C1': (-26.353,-100.167,36.849)
C5': (-26.326,-99.399,40.177)
O4': (-26.553,-100.675,38.144)
C8: (-28.738,-99.615,36.138)
O2': (-25.370,-98.168,35.920)
C6: (-29.413,-101.713,33.449)
C5: (-28.991,-100.947,34.521)
C4: (-27.737,-101.156,35.000)
P: (-28.208,-99.726,41.958)
C4': (-25.597,-100.034,39.025)
C2': (-25.889,-98.753,37.088)
C2: (-27.370,-102.730,33.512)
N1: (-28.569,-102.626,32.951)
N3: (-26.872,-102.050,34.527)
N6: (-30.613,-101.575,32.908)
N7: (-29.621,-99.974,35.243)
N9: (-27.572,-100.298,36.058)
O5': (-27.303,-100.241,40.747)
O3': (-23.748,-99.639,37.493)
OP2: (-29.492,-99.202,41.449)
C3': (-24.859,-99.031,38.145)
C1': (-26.353,-100.167,36.849)
C5': (-26.326,-99.399,40.177)
O4': (-26.553,-100.675,38.144)
C8: (-28.738,-99.615,36.138)
O2': (-25.370,-98.168,35.920)
C6: (-29.413,-101.713,33.449)
C5: (-28.991,-100.947,34.521)
C4: (-27.737,-101.156,35.000)
P: (-28.208,-99.726,41.958)
C4': (-25.597,-100.034,39.025)
C2': (-25.889,-98.753,37.088)
C2: (-27.370,-102.730,33.512)
N1: (-28.569,-102.626,32.951)
N3: (-26.872,-102.050,34.527)
N6: (-30.613,-101.575,32.908)
N7: (-29.621,-99.974,35.243)
N9: (-27.572,-100.298,36.058)
O5': (-27.303,-100.241,40.747)
O3': (-23.748,-99.639,37.493)
C2: (-32.921,-98.800,34.345)
OP1: (-37.060,-95.773,37.309)
OP2: (-37.071,-94.523,35.113)
C4: (-32.385,-97.246,35.978)
O5': (-37.863,-96.910,35.247)
C3': (-37.185,-99.357,34.101)
C1': (-35.081,-98.748,33.204)
O4': (-35.993,-97.740,32.895)
C5': (-38.058,-96.967,33.846)
P: (-37.680,-95.522,36.009)
O2: (-32.698,-99.757,33.622)
C4': (-37.331,-98.134,33.229)
C2': (-35.849,-99.958,33.676)
O2': (-36.009,-100.820,32.573)
N1: (-34.166,-98.228,34.209)
N3: (-32.046,-98.303,35.250)
N4: (-31.516,-96.753,36.857)
C6: (-34.502,-97.123,34.936)
C5: (-33.648,-96.621,35.837)
O3': (-38.272,-100.239,33.932)
OP1: (-37.060,-95.773,37.309)
OP2: (-37.071,-94.523,35.113)
C4: (-32.385,-97.246,35.978)
O5': (-37.863,-96.910,35.247)
C3': (-37.185,-99.357,34.101)
C1': (-35.081,-98.748,33.204)
O4': (-35.993,-97.740,32.895)
C5': (-38.058,-96.967,33.846)
P: (-37.680,-95.522,36.009)
O2: (-32.698,-99.757,33.622)
C4': (-37.331,-98.134,33.229)
C2': (-35.849,-99.958,33.676)
O2': (-36.009,-100.820,32.573)
N1: (-34.166,-98.228,34.209)
N3: (-32.046,-98.303,35.250)
N4: (-31.516,-96.753,36.857)
C6: (-34.502,-97.123,34.936)
C5: (-33.648,-96.621,35.837)
O3': (-38.272,-100.239,33.932)
Image (generated by PyMOL):