ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3FO4:A8:A7

Extra

PDB:
ATOM 1 O3' A A 7 -21.599 -12.861 7.465 1.00 21.78 O
ATOM 2 P U A 8 -23.151 -12.606 7.096 1.00 17.68 P
ATOM 3 OP1 U A 8 -23.527 -11.234 7.528 1.00 19.94 O
ATOM 4 OP2 U A 8 -23.919 -13.760 7.625 1.00 22.30 O
ATOM 5 O5' U A 8 -23.191 -12.762 5.508 1.00 21.97 O
ATOM 6 C5' U A 8 -23.073 -11.637 4.642 1.00 23.14 C
ATOM 7 C4' U A 8 -22.484 -12.061 3.309 1.00 24.99 C
ATOM 8 O4' U A 8 -21.103 -12.477 3.511 1.00 25.25 O
ATOM 9 C3' U A 8 -23.122 -13.263 2.622 1.00 25.81 C
ATOM 10 O3' U A 8 -24.273 -12.906 1.859 1.00 26.77 O
ATOM 11 C2' U A 8 -21.999 -13.706 1.698 1.00 26.70 C
ATOM 12 O2' U A 8 -21.875 -12.858 0.579 1.00 28.16 O
ATOM 13 C1' U A 8 -20.782 -13.523 2.606 1.00 24.88 C
ATOM 14 N1 U A 8 -20.451 -14.734 3.373 1.00 24.76 N
ATOM 15 C2 U A 8 -19.898 -15.794 2.675 1.00 22.18 C
ATOM 16 O2 U A 8 -19.686 -15.760 1.476 1.00 24.93 O
ATOM 17 N3 U A 8 -19.607 -16.899 3.431 1.00 25.71 N
ATOM 18 C4 U A 8 -19.813 -17.061 4.784 1.00 23.07 C
ATOM 19 O4 U A 8 -19.537 -18.141 5.308 1.00 24.98 O
ATOM 20 C5 U A 8 -20.387 -15.923 5.441 1.00 24.92 C
ATOM 21 C6 U A 8 -20.679 -14.822 4.728 1.00 21.93 C
ATOM 22 P C A 9 -25.410 -14.010 1.562 1.00 27.85 P
ATOM 23 OP1 C A 9 -26.595 -13.297 1.025 1.00 28.80 O
ATOM 24 OP2 C A 9 -25.547 -14.838 2.783 1.00 27.47 O
ATOM 25 O5' C A 9 -24.796 -14.941 0.415 1.00 25.19 O
TER

ATOM 1 O3' A B 6 -20.114 -7.878 4.508 1.00 26.64 O
ATOM 2 P A B 7 -19.920 -8.005 6.099 1.00 24.31 P
ATOM 3 OP1 A B 7 -20.805 -7.003 6.755 1.00 25.61 O
ATOM 4 OP2 A B 7 -18.462 -7.985 6.381 1.00 26.00 O
ATOM 5 O5' A B 7 -20.483 -9.454 6.432 1.00 25.48 O
ATOM 6 C5' A B 7 -19.792 -10.623 6.015 1.00 21.64 C
ATOM 7 C4' A B 7 -19.582 -11.541 7.192 1.00 22.83 C
ATOM 8 O4' A B 7 -18.670 -10.902 8.115 1.00 22.89 O
ATOM 9 C3' A B 7 -20.812 -11.812 8.043 1.00 22.47 C
ATOM 10 O3' A B 7 -21.599 -12.861 7.465 1.00 21.78 O
ATOM 11 C2' A B 7 -20.180 -12.243 9.369 1.00 22.82 C
ATOM 12 O2' A B 7 -19.788 -13.600 9.381 1.00 24.48 O
ATOM 13 C1' A B 7 -18.922 -11.372 9.422 1.00 23.46 C
ATOM 14 N9 A B 7 -19.024 -10.216 10.310 1.00 22.89 N
ATOM 15 C8 A B 7 -19.093 -8.888 9.961 1.00 23.96 C
ATOM 16 N7 A B 7 -19.174 -8.075 10.987 1.00 21.97 N
ATOM 17 C5 A B 7 -19.164 -8.925 12.085 1.00 22.50 C
ATOM 18 C6 A B 7 -19.234 -8.683 13.468 1.00 23.10 C
ATOM 19 N6 A B 7 -19.326 -7.465 14.002 1.00 20.99 N
ATOM 20 N1 A B 7 -19.202 -9.752 14.295 1.00 22.18 N
ATOM 21 C2 A B 7 -19.100 -10.974 13.757 1.00 21.40 C
ATOM 22 N3 A B 7 -19.026 -11.328 12.476 1.00 19.95 N
ATOM 23 C4 A B 7 -19.067 -10.245 11.682 1.00 22.37 C
ATOM 24 P U B 8 -23.151 -12.606 7.096 1.00 17.68 P
ATOM 25 OP1 U B 8 -23.527 -11.234 7.528 1.00 19.94 O
ATOM 26 OP2 U B 8 -23.919 -13.760 7.625 1.00 22.30 O
ATOM 27 O5' U B 8 -23.191 -12.762 5.508 1.00 21.97 O
TER

Atoms:
C4: (-19.813,-17.061,4.784)
N3: (-19.607,-16.899,3.431)
OP1: (-23.527,-11.234,7.528)
OP2: (-23.919,-13.760,7.625)
C2: (-19.898,-15.794,2.675)
C1': (-20.782,-13.523,2.606)
C3': (-23.122,-13.263,2.622)
O5': (-23.191,-12.762,5.508)
O4': (-21.103,-12.477,3.511)
C5': (-23.073,-11.637,4.642)
P: (-23.151,-12.606,7.096)
C4': (-22.484,-12.061,3.309)
C2': (-21.999,-13.706,1.698)
O2': (-21.875,-12.858,0.579)
N1: (-20.451,-14.734,3.373)
O4: (-19.537,-18.141,5.308)
O2: (-19.686,-15.760,1.476)
C6: (-20.679,-14.822,4.728)
C5: (-20.387,-15.923,5.441)
O3': (-24.273,-12.906,1.859)
OP1: (-20.805,-7.003,6.755)
OP2: (-18.462,-7.985,6.381)
C3': (-20.812,-11.812,8.043)
C1': (-18.922,-11.372,9.422)
C5': (-19.792,-10.623,6.015)
O4': (-18.670,-10.902,8.115)
C8: (-19.093,-8.888,9.961)
O2': (-19.788,-13.600,9.381)
C6: (-19.234,-8.683,13.468)
C5: (-19.164,-8.925,12.085)
C4: (-19.067,-10.245,11.682)
P: (-19.920,-8.005,6.099)
C4': (-19.582,-11.541,7.192)
C2': (-20.180,-12.243,9.369)
C2: (-19.100,-10.974,13.757)
N1: (-19.202,-9.752,14.295)
N3: (-19.026,-11.328,12.476)
N6: (-19.326,-7.465,14.002)
N7: (-19.174,-8.075,10.987)
N9: (-19.024,-10.216,10.310)
O5': (-20.483,-9.454,6.432)
O3': (-21.599,-12.861,7.465)
Image (generated by PyMOL):
PyMOL image
show in jmol