Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01900:01852
Extra
PDB:
ATOM 1 O3' A A1899 114.910 119.049 83.378 1.00 54.68 O
ATOM 2 P A A1900 114.850 118.567 81.846 1.00 54.18 P
ATOM 3 OP1 A A1900 116.209 118.307 81.320 1.00 54.08 O
ATOM 4 OP2 A A1900 113.985 119.558 81.159 1.00 52.86 O
ATOM 5 O5' A A1900 114.060 117.183 81.859 1.00 54.13 O
ATOM 6 C5' A A1900 113.246 116.881 80.724 1.00 56.42 C
ATOM 7 C4' A A1900 112.438 115.614 80.884 1.00 55.23 C
ATOM 8 O4' A A1900 113.131 114.413 80.525 1.00 55.47 O
ATOM 9 C3' A A1900 111.664 115.163 82.105 1.00 54.59 C
ATOM 10 O3' A A1900 110.601 116.057 82.442 1.00 53.88 O
ATOM 11 C2' A A1900 111.050 113.886 81.520 1.00 55.56 C
ATOM 12 O2' A A1900 109.990 114.207 80.636 1.00 54.20 O
ATOM 13 C1' A A1900 112.182 113.373 80.617 1.00 55.68 C
ATOM 14 N9 A A1900 112.831 112.113 80.978 1.00 55.95 N
ATOM 15 C8 A A1900 114.091 111.878 81.456 1.00 57.04 C
ATOM 16 N7 A A1900 114.370 110.607 81.605 1.00 57.93 N
ATOM 17 C5 A A1900 113.208 109.964 81.206 1.00 58.35 C
ATOM 18 C6 A A1900 112.859 108.604 81.109 1.00 58.99 C
ATOM 19 N6 A A1900 113.682 107.601 81.412 1.00 60.41 N
ATOM 20 N1 A A1900 111.617 108.305 80.681 1.00 58.21 N
ATOM 21 C2 A A1900 110.789 109.304 80.375 1.00 58.68 C
ATOM 22 N3 A A1900 111.001 110.615 80.418 1.00 58.15 N
ATOM 23 C4 A A1900 112.246 110.881 80.842 1.00 57.40 C
ATOM 24 P C A1901 109.756 115.830 83.794 1.00 52.59 P
ATOM 25 OP1 C A1901 108.877 117.014 83.948 1.00 53.49 O
ATOM 26 OP2 C A1901 110.672 115.451 84.891 1.00 53.08 O
ATOM 27 O5' C A1901 108.826 114.585 83.465 1.00 53.47 O
TER
ATOM 1 O3' C B1851 119.735 103.534 88.787 1.00 65.21 O
ATOM 2 P C B1852 120.330 103.574 87.289 1.00 67.46 P
ATOM 3 OP1 C B1852 120.754 102.184 86.958 1.00 66.38 O
ATOM 4 OP2 C B1852 121.311 104.691 87.175 1.00 67.06 O
ATOM 5 O5' C B1852 119.079 103.918 86.366 1.00 68.12 O
ATOM 6 C5' C B1852 117.934 103.049 86.336 1.00 69.41 C
ATOM 7 C4' C B1852 117.497 102.797 84.913 1.00 68.76 C
ATOM 8 O4' C B1852 116.925 104.011 84.361 1.00 67.90 O
ATOM 9 C3' C B1852 118.585 102.358 83.935 1.00 68.33 C
ATOM 10 O3' C B1852 117.979 101.517 82.953 1.00 69.70 O
ATOM 11 C2' C B1852 118.980 103.683 83.286 1.00 67.63 C
ATOM 12 O2' C B1852 119.579 103.551 82.009 1.00 66.62 O
ATOM 13 C1' C B1852 117.611 104.350 83.176 1.00 66.89 C
ATOM 14 N1 C B1852 117.569 105.810 83.022 1.00 64.89 N
ATOM 15 C2 C B1852 116.603 106.358 82.176 1.00 63.72 C
ATOM 16 O2 C B1852 115.833 105.594 81.566 1.00 61.21 O
ATOM 17 N3 C B1852 116.529 107.701 82.042 1.00 63.67 N
ATOM 18 C4 C B1852 117.366 108.486 82.717 1.00 62.81 C
ATOM 19 N4 C B1852 117.234 109.802 82.580 1.00 61.87 N
ATOM 20 C5 C B1852 118.370 107.955 83.572 1.00 64.59 C
ATOM 21 C6 C B1852 118.436 106.624 83.695 1.00 65.13 C
ATOM 22 P A B1853 118.159 99.922 83.038 1.00 70.78 P
ATOM 23 OP1 A B1853 119.374 99.636 83.850 1.00 70.06 O
ATOM 24 OP2 A B1853 118.044 99.376 81.656 1.00 69.05 O
ATOM 25 O5' A B1853 116.880 99.410 83.840 1.00 69.26 O
TER
ATOM 2 P A A1900 114.850 118.567 81.846 1.00 54.18 P
ATOM 3 OP1 A A1900 116.209 118.307 81.320 1.00 54.08 O
ATOM 4 OP2 A A1900 113.985 119.558 81.159 1.00 52.86 O
ATOM 5 O5' A A1900 114.060 117.183 81.859 1.00 54.13 O
ATOM 6 C5' A A1900 113.246 116.881 80.724 1.00 56.42 C
ATOM 7 C4' A A1900 112.438 115.614 80.884 1.00 55.23 C
ATOM 8 O4' A A1900 113.131 114.413 80.525 1.00 55.47 O
ATOM 9 C3' A A1900 111.664 115.163 82.105 1.00 54.59 C
ATOM 10 O3' A A1900 110.601 116.057 82.442 1.00 53.88 O
ATOM 11 C2' A A1900 111.050 113.886 81.520 1.00 55.56 C
ATOM 12 O2' A A1900 109.990 114.207 80.636 1.00 54.20 O
ATOM 13 C1' A A1900 112.182 113.373 80.617 1.00 55.68 C
ATOM 14 N9 A A1900 112.831 112.113 80.978 1.00 55.95 N
ATOM 15 C8 A A1900 114.091 111.878 81.456 1.00 57.04 C
ATOM 16 N7 A A1900 114.370 110.607 81.605 1.00 57.93 N
ATOM 17 C5 A A1900 113.208 109.964 81.206 1.00 58.35 C
ATOM 18 C6 A A1900 112.859 108.604 81.109 1.00 58.99 C
ATOM 19 N6 A A1900 113.682 107.601 81.412 1.00 60.41 N
ATOM 20 N1 A A1900 111.617 108.305 80.681 1.00 58.21 N
ATOM 21 C2 A A1900 110.789 109.304 80.375 1.00 58.68 C
ATOM 22 N3 A A1900 111.001 110.615 80.418 1.00 58.15 N
ATOM 23 C4 A A1900 112.246 110.881 80.842 1.00 57.40 C
ATOM 24 P C A1901 109.756 115.830 83.794 1.00 52.59 P
ATOM 25 OP1 C A1901 108.877 117.014 83.948 1.00 53.49 O
ATOM 26 OP2 C A1901 110.672 115.451 84.891 1.00 53.08 O
ATOM 27 O5' C A1901 108.826 114.585 83.465 1.00 53.47 O
TER
ATOM 1 O3' C B1851 119.735 103.534 88.787 1.00 65.21 O
ATOM 2 P C B1852 120.330 103.574 87.289 1.00 67.46 P
ATOM 3 OP1 C B1852 120.754 102.184 86.958 1.00 66.38 O
ATOM 4 OP2 C B1852 121.311 104.691 87.175 1.00 67.06 O
ATOM 5 O5' C B1852 119.079 103.918 86.366 1.00 68.12 O
ATOM 6 C5' C B1852 117.934 103.049 86.336 1.00 69.41 C
ATOM 7 C4' C B1852 117.497 102.797 84.913 1.00 68.76 C
ATOM 8 O4' C B1852 116.925 104.011 84.361 1.00 67.90 O
ATOM 9 C3' C B1852 118.585 102.358 83.935 1.00 68.33 C
ATOM 10 O3' C B1852 117.979 101.517 82.953 1.00 69.70 O
ATOM 11 C2' C B1852 118.980 103.683 83.286 1.00 67.63 C
ATOM 12 O2' C B1852 119.579 103.551 82.009 1.00 66.62 O
ATOM 13 C1' C B1852 117.611 104.350 83.176 1.00 66.89 C
ATOM 14 N1 C B1852 117.569 105.810 83.022 1.00 64.89 N
ATOM 15 C2 C B1852 116.603 106.358 82.176 1.00 63.72 C
ATOM 16 O2 C B1852 115.833 105.594 81.566 1.00 61.21 O
ATOM 17 N3 C B1852 116.529 107.701 82.042 1.00 63.67 N
ATOM 18 C4 C B1852 117.366 108.486 82.717 1.00 62.81 C
ATOM 19 N4 C B1852 117.234 109.802 82.580 1.00 61.87 N
ATOM 20 C5 C B1852 118.370 107.955 83.572 1.00 64.59 C
ATOM 21 C6 C B1852 118.436 106.624 83.695 1.00 65.13 C
ATOM 22 P A B1853 118.159 99.922 83.038 1.00 70.78 P
ATOM 23 OP1 A B1853 119.374 99.636 83.850 1.00 70.06 O
ATOM 24 OP2 A B1853 118.044 99.376 81.656 1.00 69.05 O
ATOM 25 O5' A B1853 116.880 99.410 83.840 1.00 69.26 O
TER
Atoms:
OP1: (116.209,118.307,81.320)
OP2: (113.985,119.558,81.159)
C3': (111.664,115.163,82.105)
C1': (112.182,113.373,80.617)
C5': (113.246,116.881,80.724)
O4': (113.131,114.413,80.525)
C8: (114.091,111.878,81.456)
O2': (109.990,114.207,80.636)
C6: (112.859,108.604,81.109)
C5: (113.208,109.964,81.206)
C4: (112.246,110.881,80.842)
P: (114.850,118.567,81.846)
C4': (112.438,115.614,80.884)
C2': (111.050,113.886,81.520)
C2: (110.789,109.304,80.375)
N1: (111.617,108.305,80.681)
N3: (111.001,110.615,80.418)
N6: (113.682,107.601,81.412)
N7: (114.370,110.607,81.605)
N9: (112.831,112.113,80.978)
O5': (114.060,117.183,81.859)
O3': (110.601,116.057,82.442)
OP2: (113.985,119.558,81.159)
C3': (111.664,115.163,82.105)
C1': (112.182,113.373,80.617)
C5': (113.246,116.881,80.724)
O4': (113.131,114.413,80.525)
C8: (114.091,111.878,81.456)
O2': (109.990,114.207,80.636)
C6: (112.859,108.604,81.109)
C5: (113.208,109.964,81.206)
C4: (112.246,110.881,80.842)
P: (114.850,118.567,81.846)
C4': (112.438,115.614,80.884)
C2': (111.050,113.886,81.520)
C2: (110.789,109.304,80.375)
N1: (111.617,108.305,80.681)
N3: (111.001,110.615,80.418)
N6: (113.682,107.601,81.412)
N7: (114.370,110.607,81.605)
N9: (112.831,112.113,80.978)
O5': (114.060,117.183,81.859)
O3': (110.601,116.057,82.442)
C2: (116.603,106.358,82.176)
OP1: (120.754,102.184,86.958)
OP2: (121.311,104.691,87.175)
C4: (117.366,108.486,82.717)
O5': (119.079,103.918,86.366)
C3': (118.585,102.358,83.935)
C1': (117.611,104.350,83.176)
O4': (116.925,104.011,84.361)
C5': (117.934,103.049,86.336)
P: (120.330,103.574,87.289)
O2: (115.833,105.594,81.566)
C4': (117.497,102.797,84.913)
C2': (118.980,103.683,83.286)
O2': (119.579,103.551,82.009)
N1: (117.569,105.810,83.022)
N3: (116.529,107.701,82.042)
N4: (117.234,109.802,82.580)
C6: (118.436,106.624,83.695)
C5: (118.370,107.955,83.572)
O3': (117.979,101.517,82.953)
OP1: (120.754,102.184,86.958)
OP2: (121.311,104.691,87.175)
C4: (117.366,108.486,82.717)
O5': (119.079,103.918,86.366)
C3': (118.585,102.358,83.935)
C1': (117.611,104.350,83.176)
O4': (116.925,104.011,84.361)
C5': (117.934,103.049,86.336)
P: (120.330,103.574,87.289)
O2: (115.833,105.594,81.566)
C4': (117.497,102.797,84.913)
C2': (118.980,103.683,83.286)
O2': (119.579,103.551,82.009)
N1: (117.569,105.810,83.022)
N3: (116.529,107.701,82.042)
N4: (117.234,109.802,82.580)
C6: (118.436,106.624,83.695)
C5: (118.370,107.955,83.572)
O3': (117.979,101.517,82.953)
Image (generated by PyMOL):