ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01806:01844

Extra

PDB:
ATOM 1 O3' A A1805 115.516 137.968 80.914 1.00 38.80 O
ATOM 2 P G A1806 116.442 136.805 80.305 1.00 39.17 P
ATOM 3 OP1 G A1806 117.694 137.457 79.863 1.00 41.04 O
ATOM 4 OP2 G A1806 115.662 135.985 79.344 1.00 38.48 O
ATOM 5 O5' G A1806 116.791 135.908 81.567 1.00 40.25 O
ATOM 6 C5' G A1806 117.589 136.440 82.636 1.00 41.03 C
ATOM 7 C4' G A1806 117.632 135.472 83.789 1.00 41.15 C
ATOM 8 O4' G A1806 116.319 135.391 84.406 1.00 42.49 O
ATOM 9 C3' G A1806 117.935 134.033 83.422 1.00 39.99 C
ATOM 10 O3' G A1806 119.310 133.790 83.170 1.00 43.60 O
ATOM 11 C2' G A1806 117.392 133.290 84.631 1.00 41.03 C
ATOM 12 O2' G A1806 118.226 133.330 85.760 1.00 39.45 O
ATOM 13 C1' G A1806 116.110 134.078 84.906 1.00 41.50 C
ATOM 14 N9 G A1806 115.023 133.452 84.158 1.00 41.70 N
ATOM 15 C8 G A1806 114.598 133.752 82.885 1.00 40.81 C
ATOM 16 N7 G A1806 113.688 132.930 82.444 1.00 39.97 N
ATOM 17 C5 G A1806 113.479 132.051 83.497 1.00 38.96 C
ATOM 18 C6 G A1806 112.628 130.923 83.591 1.00 38.19 C
ATOM 19 O6 G A1806 111.869 130.457 82.732 1.00 35.64 O
ATOM 20 N1 G A1806 112.731 130.310 84.836 1.00 37.01 N
ATOM 21 C2 G A1806 113.554 130.723 85.855 1.00 37.93 C
ATOM 22 N2 G A1806 113.511 129.999 86.980 1.00 37.74 N
ATOM 23 N3 G A1806 114.361 131.768 85.775 1.00 37.93 N
ATOM 24 C4 G A1806 114.273 132.379 84.573 1.00 39.76 C
ATOM 25 P G A1807 119.735 132.592 82.184 1.00 46.09 P
ATOM 26 OP1 G A1807 121.211 132.558 82.097 1.00 45.33 O
ATOM 27 OP2 G A1807 118.936 132.699 80.939 1.00 44.78 O
ATOM 28 O5' G A1807 119.250 131.289 82.958 1.00 43.67 O
TER

ATOM 1 O3' A B1843 115.968 134.257 88.495 1.00 46.11 O
ATOM 2 P A B1844 117.076 133.354 89.237 1.00 48.01 P
ATOM 3 OP1 A B1844 117.965 132.795 88.193 1.00 46.31 O
ATOM 4 OP2 A B1844 116.415 132.438 90.189 1.00 44.97 O
ATOM 5 O5' A B1844 117.895 134.397 90.121 1.00 48.36 O
ATOM 6 C5' A B1844 118.590 135.516 89.537 1.00 49.67 C
ATOM 7 C4' A B1844 119.170 136.382 90.633 1.00 51.90 C
ATOM 8 O4' A B1844 118.088 136.914 91.450 1.00 52.52 O
ATOM 9 C3' A B1844 120.053 135.628 91.614 1.00 53.85 C
ATOM 10 O3' A B1844 121.387 135.520 91.132 1.00 55.99 O
ATOM 11 C2' A B1844 119.916 136.457 92.886 1.00 54.04 C
ATOM 12 O2' A B1844 120.691 137.638 92.856 1.00 57.87 O
ATOM 13 C1' A B1844 118.435 136.843 92.828 1.00 52.28 C
ATOM 14 N9 A B1844 117.561 135.851 93.458 1.00 51.36 N
ATOM 15 C8 A B1844 116.657 135.038 92.820 1.00 52.15 C
ATOM 16 N7 A B1844 116.034 134.209 93.617 1.00 52.69 N
ATOM 17 C5 A B1844 116.550 134.500 94.869 1.00 51.28 C
ATOM 18 C6 A B1844 116.304 133.953 96.134 1.00 51.92 C
ATOM 19 N6 A B1844 115.436 132.959 96.352 1.00 51.64 N
ATOM 20 N1 A B1844 116.988 134.461 97.181 1.00 52.07 N
ATOM 21 C2 A B1844 117.859 135.449 96.954 1.00 50.89 C
ATOM 22 N3 A B1844 118.181 136.042 95.809 1.00 50.96 N
ATOM 23 C4 A B1844 117.485 135.516 94.790 1.00 50.97 C
ATOM 24 P U B1845 122.225 134.171 91.392 1.00 59.13 P
ATOM 25 OP1 U B1845 123.641 134.410 90.998 1.00 60.92 O
ATOM 26 OP2 U B1845 121.477 133.047 90.764 1.00 58.90 O
ATOM 27 O5' U B1845 122.172 133.990 92.974 1.00 55.32 O
TER

Atoms:
OP1: (117.694,137.457,79.863)
OP2: (115.662,135.985,79.344)
C3': (117.935,134.033,83.422)
C1': (116.110,134.078,84.906)
C5': (117.589,136.440,82.636)
O6: (111.869,130.457,82.732)
O4': (116.319,135.391,84.406)
C8: (114.598,133.752,82.885)
C2: (113.554,130.723,85.855)
C6: (112.628,130.923,83.591)
C5: (113.479,132.051,83.497)
C4: (114.273,132.379,84.573)
P: (116.442,136.805,80.305)
C4': (117.632,135.472,83.789)
C2': (117.392,133.290,84.631)
O2': (118.226,133.330,85.760)
N1: (112.731,130.310,84.836)
N2: (113.511,129.999,86.980)
N3: (114.361,131.768,85.775)
N7: (113.688,132.930,82.444)
N9: (115.023,133.452,84.158)
O5': (116.791,135.908,81.567)
O3': (119.310,133.790,83.170)
OP1: (117.965,132.795,88.193)
OP2: (116.415,132.438,90.189)
C3': (120.053,135.628,91.614)
C1': (118.435,136.843,92.828)
C5': (118.590,135.516,89.537)
O4': (118.088,136.914,91.450)
C8: (116.657,135.038,92.820)
O2': (120.691,137.638,92.856)
C6: (116.304,133.953,96.134)
C5: (116.550,134.500,94.869)
C4: (117.485,135.516,94.790)
P: (117.076,133.354,89.237)
C4': (119.170,136.382,90.633)
C2': (119.916,136.457,92.886)
C2: (117.859,135.449,96.954)
N1: (116.988,134.461,97.181)
N3: (118.181,136.042,95.809)
N6: (115.436,132.959,96.352)
N7: (116.034,134.209,93.617)
N9: (117.561,135.851,93.458)
O5': (117.895,134.397,90.121)
O3': (121.387,135.520,91.132)
Image (generated by PyMOL):
PyMOL image
show in jmol