Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:P58:P57
Extra
PDB:
ATOM 1 O3' A A 57 -0.414 -50.778 18.575 1.00 54.17 O
ATOM 2 P U A 58 0.453 -52.117 18.381 1.00 54.84 P
ATOM 3 OP1 U A 58 1.345 -52.268 19.551 1.00 54.76 O
ATOM 4 OP2 U A 58 1.025 -52.139 17.013 1.00 54.90 O
ATOM 5 O5' U A 58 -0.667 -53.245 18.454 1.00 55.40 O
ATOM 6 C5' U A 58 -1.639 -53.330 17.433 1.00 56.56 C
ATOM 7 C4' U A 58 -2.868 -54.037 17.963 1.00 57.49 C
ATOM 8 O4' U A 58 -3.316 -53.377 19.174 1.00 58.09 O
ATOM 9 C3' U A 58 -4.047 -54.046 17.003 1.00 57.86 C
ATOM 10 O3' U A 58 -4.639 -55.357 16.979 1.00 57.89 O
ATOM 11 C2' U A 58 -4.966 -52.965 17.573 1.00 58.16 C
ATOM 12 O2' U A 58 -6.324 -53.224 17.307 1.00 58.58 O
ATOM 13 C1' U A 58 -4.692 -53.073 19.070 1.00 58.62 C
ATOM 14 N1 U A 58 -4.983 -51.842 19.883 1.00 59.35 N
ATOM 15 C2 U A 58 -6.122 -51.792 20.676 1.00 59.84 C
ATOM 16 O2 U A 58 -6.932 -52.699 20.766 1.00 60.31 O
ATOM 17 N3 U A 58 -6.284 -50.620 21.382 1.00 59.92 N
ATOM 18 C4 U A 58 -5.443 -49.517 21.379 1.00 59.83 C
ATOM 19 O4 U A 58 -5.721 -48.536 22.061 1.00 59.71 O
ATOM 20 C5 U A 58 -4.280 -49.641 20.532 1.00 59.75 C
ATOM 21 C6 U A 58 -4.099 -50.773 19.837 1.00 59.57 C
ATOM 22 P G A 59 -4.336 -56.385 15.779 1.00 58.29 P
ATOM 23 OP1 G A 59 -5.172 -57.592 15.978 1.00 57.82 O
ATOM 24 OP2 G A 59 -2.867 -56.531 15.655 1.00 58.05 O
ATOM 25 O5' G A 59 -4.881 -55.608 14.489 1.00 57.68 O
TER
ATOM 1 O3' G B 56 4.109 -46.697 19.549 1.00 53.55 O
ATOM 2 P A B 57 4.084 -48.271 19.243 1.00 53.74 P
ATOM 3 OP1 A B 57 4.257 -48.960 20.542 1.00 53.44 O
ATOM 4 OP2 A B 57 5.018 -48.559 18.128 1.00 53.27 O
ATOM 5 O5' A B 57 2.599 -48.522 18.698 1.00 53.54 O
ATOM 6 C5' A B 57 1.469 -48.415 19.570 1.00 53.34 C
ATOM 7 C4' A B 57 0.162 -48.408 18.791 1.00 53.00 C
ATOM 8 O4' A B 57 0.089 -47.273 17.886 1.00 52.03 O
ATOM 9 C3' A B 57 -0.065 -49.592 17.862 1.00 53.00 C
ATOM 10 O3' A B 57 -0.414 -50.778 18.575 1.00 54.17 O
ATOM 11 C2' A B 57 -1.201 -49.037 17.011 1.00 52.26 C
ATOM 12 O2' A B 57 -2.447 -49.017 17.686 1.00 52.52 O
ATOM 13 C1' A B 57 -0.689 -47.620 16.754 1.00 51.22 C
ATOM 14 N9 A B 57 0.131 -47.526 15.542 1.00 49.74 N
ATOM 15 C8 A B 57 1.491 -47.648 15.454 1.00 49.42 C
ATOM 16 N7 A B 57 1.968 -47.528 14.239 1.00 48.69 N
ATOM 17 C5 A B 57 0.843 -47.314 13.468 1.00 48.24 C
ATOM 18 C6 A B 57 0.672 -47.108 12.083 1.00 47.88 C
ATOM 19 N6 A B 57 1.689 -47.089 11.216 1.00 47.67 N
ATOM 20 N1 A B 57 -0.585 -46.921 11.622 1.00 47.99 N
ATOM 21 C2 A B 57 -1.603 -46.942 12.498 1.00 48.29 C
ATOM 22 N3 A B 57 -1.563 -47.129 13.821 1.00 48.47 N
ATOM 23 C4 A B 57 -0.299 -47.310 14.250 1.00 48.70 C
ATOM 24 P U B 58 0.453 -52.117 18.381 1.00 54.84 P
ATOM 25 OP1 U B 58 1.345 -52.268 19.551 1.00 54.76 O
ATOM 26 OP2 U B 58 1.025 -52.139 17.013 1.00 54.90 O
ATOM 27 O5' U B 58 -0.667 -53.245 18.454 1.00 55.40 O
TER
ATOM 2 P U A 58 0.453 -52.117 18.381 1.00 54.84 P
ATOM 3 OP1 U A 58 1.345 -52.268 19.551 1.00 54.76 O
ATOM 4 OP2 U A 58 1.025 -52.139 17.013 1.00 54.90 O
ATOM 5 O5' U A 58 -0.667 -53.245 18.454 1.00 55.40 O
ATOM 6 C5' U A 58 -1.639 -53.330 17.433 1.00 56.56 C
ATOM 7 C4' U A 58 -2.868 -54.037 17.963 1.00 57.49 C
ATOM 8 O4' U A 58 -3.316 -53.377 19.174 1.00 58.09 O
ATOM 9 C3' U A 58 -4.047 -54.046 17.003 1.00 57.86 C
ATOM 10 O3' U A 58 -4.639 -55.357 16.979 1.00 57.89 O
ATOM 11 C2' U A 58 -4.966 -52.965 17.573 1.00 58.16 C
ATOM 12 O2' U A 58 -6.324 -53.224 17.307 1.00 58.58 O
ATOM 13 C1' U A 58 -4.692 -53.073 19.070 1.00 58.62 C
ATOM 14 N1 U A 58 -4.983 -51.842 19.883 1.00 59.35 N
ATOM 15 C2 U A 58 -6.122 -51.792 20.676 1.00 59.84 C
ATOM 16 O2 U A 58 -6.932 -52.699 20.766 1.00 60.31 O
ATOM 17 N3 U A 58 -6.284 -50.620 21.382 1.00 59.92 N
ATOM 18 C4 U A 58 -5.443 -49.517 21.379 1.00 59.83 C
ATOM 19 O4 U A 58 -5.721 -48.536 22.061 1.00 59.71 O
ATOM 20 C5 U A 58 -4.280 -49.641 20.532 1.00 59.75 C
ATOM 21 C6 U A 58 -4.099 -50.773 19.837 1.00 59.57 C
ATOM 22 P G A 59 -4.336 -56.385 15.779 1.00 58.29 P
ATOM 23 OP1 G A 59 -5.172 -57.592 15.978 1.00 57.82 O
ATOM 24 OP2 G A 59 -2.867 -56.531 15.655 1.00 58.05 O
ATOM 25 O5' G A 59 -4.881 -55.608 14.489 1.00 57.68 O
TER
ATOM 1 O3' G B 56 4.109 -46.697 19.549 1.00 53.55 O
ATOM 2 P A B 57 4.084 -48.271 19.243 1.00 53.74 P
ATOM 3 OP1 A B 57 4.257 -48.960 20.542 1.00 53.44 O
ATOM 4 OP2 A B 57 5.018 -48.559 18.128 1.00 53.27 O
ATOM 5 O5' A B 57 2.599 -48.522 18.698 1.00 53.54 O
ATOM 6 C5' A B 57 1.469 -48.415 19.570 1.00 53.34 C
ATOM 7 C4' A B 57 0.162 -48.408 18.791 1.00 53.00 C
ATOM 8 O4' A B 57 0.089 -47.273 17.886 1.00 52.03 O
ATOM 9 C3' A B 57 -0.065 -49.592 17.862 1.00 53.00 C
ATOM 10 O3' A B 57 -0.414 -50.778 18.575 1.00 54.17 O
ATOM 11 C2' A B 57 -1.201 -49.037 17.011 1.00 52.26 C
ATOM 12 O2' A B 57 -2.447 -49.017 17.686 1.00 52.52 O
ATOM 13 C1' A B 57 -0.689 -47.620 16.754 1.00 51.22 C
ATOM 14 N9 A B 57 0.131 -47.526 15.542 1.00 49.74 N
ATOM 15 C8 A B 57 1.491 -47.648 15.454 1.00 49.42 C
ATOM 16 N7 A B 57 1.968 -47.528 14.239 1.00 48.69 N
ATOM 17 C5 A B 57 0.843 -47.314 13.468 1.00 48.24 C
ATOM 18 C6 A B 57 0.672 -47.108 12.083 1.00 47.88 C
ATOM 19 N6 A B 57 1.689 -47.089 11.216 1.00 47.67 N
ATOM 20 N1 A B 57 -0.585 -46.921 11.622 1.00 47.99 N
ATOM 21 C2 A B 57 -1.603 -46.942 12.498 1.00 48.29 C
ATOM 22 N3 A B 57 -1.563 -47.129 13.821 1.00 48.47 N
ATOM 23 C4 A B 57 -0.299 -47.310 14.250 1.00 48.70 C
ATOM 24 P U B 58 0.453 -52.117 18.381 1.00 54.84 P
ATOM 25 OP1 U B 58 1.345 -52.268 19.551 1.00 54.76 O
ATOM 26 OP2 U B 58 1.025 -52.139 17.013 1.00 54.90 O
ATOM 27 O5' U B 58 -0.667 -53.245 18.454 1.00 55.40 O
TER
Atoms:
C4: (-5.443,-49.517,21.379)
N3: (-6.284,-50.620,21.382)
OP1: (1.345,-52.268,19.551)
OP2: (1.025,-52.139,17.013)
C2: (-6.122,-51.792,20.676)
C1': (-4.692,-53.073,19.070)
C3': (-4.047,-54.046,17.003)
O5': (-0.667,-53.245,18.454)
O4': (-3.316,-53.377,19.174)
C5': (-1.639,-53.330,17.433)
P: (0.453,-52.117,18.381)
C4': (-2.868,-54.037,17.963)
C2': (-4.966,-52.965,17.573)
O2': (-6.324,-53.224,17.307)
N1: (-4.983,-51.842,19.883)
O4: (-5.721,-48.536,22.061)
O2: (-6.932,-52.699,20.766)
C6: (-4.099,-50.773,19.837)
C5: (-4.280,-49.641,20.532)
O3': (-4.639,-55.357,16.979)
N3: (-6.284,-50.620,21.382)
OP1: (1.345,-52.268,19.551)
OP2: (1.025,-52.139,17.013)
C2: (-6.122,-51.792,20.676)
C1': (-4.692,-53.073,19.070)
C3': (-4.047,-54.046,17.003)
O5': (-0.667,-53.245,18.454)
O4': (-3.316,-53.377,19.174)
C5': (-1.639,-53.330,17.433)
P: (0.453,-52.117,18.381)
C4': (-2.868,-54.037,17.963)
C2': (-4.966,-52.965,17.573)
O2': (-6.324,-53.224,17.307)
N1: (-4.983,-51.842,19.883)
O4: (-5.721,-48.536,22.061)
O2: (-6.932,-52.699,20.766)
C6: (-4.099,-50.773,19.837)
C5: (-4.280,-49.641,20.532)
O3': (-4.639,-55.357,16.979)
OP1: (4.257,-48.960,20.542)
OP2: (5.018,-48.559,18.128)
C3': (-0.065,-49.592,17.862)
C1': (-0.689,-47.620,16.754)
C5': (1.469,-48.415,19.570)
O4': (0.089,-47.273,17.886)
C8: (1.491,-47.648,15.454)
O2': (-2.447,-49.017,17.686)
C6: (0.672,-47.108,12.083)
C5: (0.843,-47.314,13.468)
C4: (-0.299,-47.310,14.250)
P: (4.084,-48.271,19.243)
C4': (0.162,-48.408,18.791)
C2': (-1.201,-49.037,17.011)
C2: (-1.603,-46.942,12.498)
N1: (-0.585,-46.921,11.622)
N3: (-1.563,-47.129,13.821)
N6: (1.689,-47.089,11.216)
N7: (1.968,-47.528,14.239)
N9: (0.131,-47.526,15.542)
O5': (2.599,-48.522,18.698)
O3': (-0.414,-50.778,18.575)
OP2: (5.018,-48.559,18.128)
C3': (-0.065,-49.592,17.862)
C1': (-0.689,-47.620,16.754)
C5': (1.469,-48.415,19.570)
O4': (0.089,-47.273,17.886)
C8: (1.491,-47.648,15.454)
O2': (-2.447,-49.017,17.686)
C6: (0.672,-47.108,12.083)
C5: (0.843,-47.314,13.468)
C4: (-0.299,-47.310,14.250)
P: (4.084,-48.271,19.243)
C4': (0.162,-48.408,18.791)
C2': (-1.201,-49.037,17.011)
C2: (-1.603,-46.942,12.498)
N1: (-0.585,-46.921,11.622)
N3: (-1.563,-47.129,13.821)
N6: (1.689,-47.089,11.216)
N7: (1.968,-47.528,14.239)
N9: (0.131,-47.526,15.542)
O5': (2.599,-48.522,18.698)
O3': (-0.414,-50.778,18.575)
Image (generated by PyMOL):