Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A642:A2362
Extra
PDB:
ATOM 1 O3' U A 641 -125.882 -55.394 64.132 1.00 0.01 O
ATOM 2 P A A 642 -125.745 -54.623 65.548 1.00 0.02 P
ATOM 3 OP1 A A 642 -126.425 -53.299 65.415 1.00 0.02 O
ATOM 4 OP2 A A 642 -124.319 -54.657 65.928 1.00 0.02 O
ATOM 5 O5' A A 642 -126.567 -55.557 66.529 1.00 0.02 O
ATOM 6 C5' A A 642 -126.768 -55.192 67.874 1.00 0.02 C
ATOM 7 C4' A A 642 -128.054 -55.752 68.378 1.00 0.02 C
ATOM 8 O4' A A 642 -129.140 -55.065 67.750 1.00 0.02 O
ATOM 9 C3' A A 642 -128.286 -57.190 68.023 1.00 0.02 C
ATOM 10 O3' A A 642 -127.670 -58.052 68.912 1.00 0.02 O
ATOM 11 C2' A A 642 -129.785 -57.323 68.012 1.00 0.02 C
ATOM 12 O2' A A 642 -130.272 -57.542 69.320 1.00 0.02 O
ATOM 13 C1' A A 642 -130.211 -55.944 67.556 1.00 0.02 C
ATOM 14 N9 A A 642 -130.600 -55.905 66.147 1.00 0.01 N
ATOM 15 C8 A A 642 -130.084 -55.085 65.192 1.00 0.01 C
ATOM 16 N7 A A 642 -130.662 -55.235 64.030 1.00 0.01 N
ATOM 17 C5 A A 642 -131.640 -56.202 64.266 1.00 0.01 C
ATOM 18 C6 A A 642 -132.600 -56.786 63.434 1.00 0.01 C
ATOM 19 N6 A A 642 -132.745 -56.447 62.140 1.00 0.01 N
ATOM 20 N1 A A 642 -133.391 -57.727 63.981 1.00 0.01 N
ATOM 21 C2 A A 642 -133.243 -58.040 65.261 1.00 0.01 C
ATOM 22 N3 A A 642 -132.394 -57.555 66.140 1.00 0.01 N
ATOM 23 C4 A A 642 -131.620 -56.622 65.573 1.00 0.01 C
ATOM 24 P A A 643 -126.717 -59.171 68.345 1.00 0.01 P
ATOM 25 OP1 A A 643 -126.018 -59.729 69.501 1.00 0.01 O
ATOM 26 OP2 A A 643 -125.928 -58.562 67.247 1.00 0.01 O
ATOM 27 O5' A A 643 -127.726 -60.239 67.772 1.00 0.01 O
TER
ATOM 1 O3' C B2361 -138.488 -63.899 58.941 1.00 0.01 O
ATOM 2 P A B2362 -139.468 -62.747 59.411 1.00 0.01 P
ATOM 3 OP1 A B2362 -140.405 -63.345 60.378 1.00 0.01 O
ATOM 4 OP2 A B2362 -140.012 -62.091 58.209 1.00 0.01 O
ATOM 5 O5' A B2362 -138.484 -61.769 60.161 1.00 0.01 O
ATOM 6 C5' A B2362 -137.929 -62.141 61.398 1.00 0.01 C
ATOM 7 C4' A B2362 -136.977 -61.104 61.889 1.00 0.01 C
ATOM 8 O4' A B2362 -135.845 -61.016 60.983 1.00 0.01 O
ATOM 9 C3' A B2362 -137.520 -59.692 61.939 1.00 0.01 C
ATOM 10 O3' A B2362 -138.315 -59.445 63.094 1.00 0.01 O
ATOM 11 C2' A B2362 -136.248 -58.845 61.863 1.00 0.01 C
ATOM 12 O2' A B2362 -135.610 -58.782 63.126 1.00 0.01 O
ATOM 13 C1' A B2362 -135.378 -59.685 60.929 1.00 0.01 C
ATOM 14 N9 A B2362 -135.428 -59.234 59.527 1.00 0.01 N
ATOM 15 C8 A B2362 -136.049 -59.871 58.485 1.00 0.01 C
ATOM 16 N7 A B2362 -135.888 -59.274 57.319 1.00 0.01 N
ATOM 17 C5 A B2362 -135.093 -58.182 57.621 1.00 0.01 C
ATOM 18 C6 A B2362 -134.569 -57.163 56.833 1.00 0.01 C
ATOM 19 N6 A B2362 -134.787 -57.096 55.530 1.00 0.01 N
ATOM 20 N1 A B2362 -133.819 -56.212 57.401 1.00 0.01 N
ATOM 21 C2 A B2362 -133.612 -56.284 58.704 1.00 0.01 C
ATOM 22 N3 A B2362 -134.042 -57.193 59.561 1.00 0.01 N
ATOM 23 C4 A B2362 -134.785 -58.141 58.960 1.00 0.01 C
ATOM 24 P G B2363 -139.397 -58.250 63.092 1.00 1.69 P
ATOM 25 OP1 G B2363 -140.078 -58.283 64.395 1.00 1.69 O
ATOM 26 OP2 G B2363 -140.215 -58.401 61.857 1.00 1.69 O
ATOM 27 O5' G B2363 -138.481 -56.946 63.000 1.00 1.69 O
TER
ATOM 2 P A A 642 -125.745 -54.623 65.548 1.00 0.02 P
ATOM 3 OP1 A A 642 -126.425 -53.299 65.415 1.00 0.02 O
ATOM 4 OP2 A A 642 -124.319 -54.657 65.928 1.00 0.02 O
ATOM 5 O5' A A 642 -126.567 -55.557 66.529 1.00 0.02 O
ATOM 6 C5' A A 642 -126.768 -55.192 67.874 1.00 0.02 C
ATOM 7 C4' A A 642 -128.054 -55.752 68.378 1.00 0.02 C
ATOM 8 O4' A A 642 -129.140 -55.065 67.750 1.00 0.02 O
ATOM 9 C3' A A 642 -128.286 -57.190 68.023 1.00 0.02 C
ATOM 10 O3' A A 642 -127.670 -58.052 68.912 1.00 0.02 O
ATOM 11 C2' A A 642 -129.785 -57.323 68.012 1.00 0.02 C
ATOM 12 O2' A A 642 -130.272 -57.542 69.320 1.00 0.02 O
ATOM 13 C1' A A 642 -130.211 -55.944 67.556 1.00 0.02 C
ATOM 14 N9 A A 642 -130.600 -55.905 66.147 1.00 0.01 N
ATOM 15 C8 A A 642 -130.084 -55.085 65.192 1.00 0.01 C
ATOM 16 N7 A A 642 -130.662 -55.235 64.030 1.00 0.01 N
ATOM 17 C5 A A 642 -131.640 -56.202 64.266 1.00 0.01 C
ATOM 18 C6 A A 642 -132.600 -56.786 63.434 1.00 0.01 C
ATOM 19 N6 A A 642 -132.745 -56.447 62.140 1.00 0.01 N
ATOM 20 N1 A A 642 -133.391 -57.727 63.981 1.00 0.01 N
ATOM 21 C2 A A 642 -133.243 -58.040 65.261 1.00 0.01 C
ATOM 22 N3 A A 642 -132.394 -57.555 66.140 1.00 0.01 N
ATOM 23 C4 A A 642 -131.620 -56.622 65.573 1.00 0.01 C
ATOM 24 P A A 643 -126.717 -59.171 68.345 1.00 0.01 P
ATOM 25 OP1 A A 643 -126.018 -59.729 69.501 1.00 0.01 O
ATOM 26 OP2 A A 643 -125.928 -58.562 67.247 1.00 0.01 O
ATOM 27 O5' A A 643 -127.726 -60.239 67.772 1.00 0.01 O
TER
ATOM 1 O3' C B2361 -138.488 -63.899 58.941 1.00 0.01 O
ATOM 2 P A B2362 -139.468 -62.747 59.411 1.00 0.01 P
ATOM 3 OP1 A B2362 -140.405 -63.345 60.378 1.00 0.01 O
ATOM 4 OP2 A B2362 -140.012 -62.091 58.209 1.00 0.01 O
ATOM 5 O5' A B2362 -138.484 -61.769 60.161 1.00 0.01 O
ATOM 6 C5' A B2362 -137.929 -62.141 61.398 1.00 0.01 C
ATOM 7 C4' A B2362 -136.977 -61.104 61.889 1.00 0.01 C
ATOM 8 O4' A B2362 -135.845 -61.016 60.983 1.00 0.01 O
ATOM 9 C3' A B2362 -137.520 -59.692 61.939 1.00 0.01 C
ATOM 10 O3' A B2362 -138.315 -59.445 63.094 1.00 0.01 O
ATOM 11 C2' A B2362 -136.248 -58.845 61.863 1.00 0.01 C
ATOM 12 O2' A B2362 -135.610 -58.782 63.126 1.00 0.01 O
ATOM 13 C1' A B2362 -135.378 -59.685 60.929 1.00 0.01 C
ATOM 14 N9 A B2362 -135.428 -59.234 59.527 1.00 0.01 N
ATOM 15 C8 A B2362 -136.049 -59.871 58.485 1.00 0.01 C
ATOM 16 N7 A B2362 -135.888 -59.274 57.319 1.00 0.01 N
ATOM 17 C5 A B2362 -135.093 -58.182 57.621 1.00 0.01 C
ATOM 18 C6 A B2362 -134.569 -57.163 56.833 1.00 0.01 C
ATOM 19 N6 A B2362 -134.787 -57.096 55.530 1.00 0.01 N
ATOM 20 N1 A B2362 -133.819 -56.212 57.401 1.00 0.01 N
ATOM 21 C2 A B2362 -133.612 -56.284 58.704 1.00 0.01 C
ATOM 22 N3 A B2362 -134.042 -57.193 59.561 1.00 0.01 N
ATOM 23 C4 A B2362 -134.785 -58.141 58.960 1.00 0.01 C
ATOM 24 P G B2363 -139.397 -58.250 63.092 1.00 1.69 P
ATOM 25 OP1 G B2363 -140.078 -58.283 64.395 1.00 1.69 O
ATOM 26 OP2 G B2363 -140.215 -58.401 61.857 1.00 1.69 O
ATOM 27 O5' G B2363 -138.481 -56.946 63.000 1.00 1.69 O
TER
Atoms:
OP1: (-126.425,-53.299,65.415)
OP2: (-124.319,-54.657,65.928)
C3': (-128.286,-57.190,68.023)
C1': (-130.211,-55.944,67.556)
C5': (-126.768,-55.192,67.874)
O4': (-129.140,-55.065,67.750)
C8: (-130.084,-55.085,65.192)
O2': (-130.272,-57.542,69.320)
C6: (-132.600,-56.786,63.434)
C5: (-131.640,-56.202,64.266)
C4: (-131.620,-56.622,65.573)
P: (-125.745,-54.623,65.548)
C4': (-128.054,-55.752,68.378)
C2': (-129.785,-57.323,68.012)
C2: (-133.243,-58.040,65.261)
N1: (-133.391,-57.727,63.981)
N3: (-132.394,-57.555,66.140)
N6: (-132.745,-56.447,62.140)
N7: (-130.662,-55.235,64.030)
N9: (-130.600,-55.905,66.147)
O5': (-126.567,-55.557,66.529)
O3': (-127.670,-58.052,68.912)
OP2: (-124.319,-54.657,65.928)
C3': (-128.286,-57.190,68.023)
C1': (-130.211,-55.944,67.556)
C5': (-126.768,-55.192,67.874)
O4': (-129.140,-55.065,67.750)
C8: (-130.084,-55.085,65.192)
O2': (-130.272,-57.542,69.320)
C6: (-132.600,-56.786,63.434)
C5: (-131.640,-56.202,64.266)
C4: (-131.620,-56.622,65.573)
P: (-125.745,-54.623,65.548)
C4': (-128.054,-55.752,68.378)
C2': (-129.785,-57.323,68.012)
C2: (-133.243,-58.040,65.261)
N1: (-133.391,-57.727,63.981)
N3: (-132.394,-57.555,66.140)
N6: (-132.745,-56.447,62.140)
N7: (-130.662,-55.235,64.030)
N9: (-130.600,-55.905,66.147)
O5': (-126.567,-55.557,66.529)
O3': (-127.670,-58.052,68.912)
OP1: (-140.405,-63.345,60.378)
OP2: (-140.012,-62.091,58.209)
C3': (-137.520,-59.692,61.939)
C1': (-135.378,-59.685,60.929)
C5': (-137.929,-62.141,61.398)
O4': (-135.845,-61.016,60.983)
C8: (-136.049,-59.871,58.485)
O2': (-135.610,-58.782,63.126)
C6: (-134.569,-57.163,56.833)
C5: (-135.093,-58.182,57.621)
C4: (-134.785,-58.141,58.960)
P: (-139.468,-62.747,59.411)
C4': (-136.977,-61.104,61.889)
C2': (-136.248,-58.845,61.863)
C2: (-133.612,-56.284,58.704)
N1: (-133.819,-56.212,57.401)
N3: (-134.042,-57.193,59.561)
N6: (-134.787,-57.096,55.530)
N7: (-135.888,-59.274,57.319)
N9: (-135.428,-59.234,59.527)
O5': (-138.484,-61.769,60.161)
O3': (-138.315,-59.445,63.094)
OP2: (-140.012,-62.091,58.209)
C3': (-137.520,-59.692,61.939)
C1': (-135.378,-59.685,60.929)
C5': (-137.929,-62.141,61.398)
O4': (-135.845,-61.016,60.983)
C8: (-136.049,-59.871,58.485)
O2': (-135.610,-58.782,63.126)
C6: (-134.569,-57.163,56.833)
C5: (-135.093,-58.182,57.621)
C4: (-134.785,-58.141,58.960)
P: (-139.468,-62.747,59.411)
C4': (-136.977,-61.104,61.889)
C2': (-136.248,-58.845,61.863)
C2: (-133.612,-56.284,58.704)
N1: (-133.819,-56.212,57.401)
N3: (-134.042,-57.193,59.561)
N6: (-134.787,-57.096,55.530)
N7: (-135.888,-59.274,57.319)
N9: (-135.428,-59.234,59.527)
O5': (-138.484,-61.769,60.161)
O3': (-138.315,-59.445,63.094)
Image (generated by PyMOL):