Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0446:0464
Extra
PDB:
ATOM 1 O3' U A 445 49.942 130.069 53.232 1.00 26.84 O
ATOM 2 P G A 446 50.423 130.059 54.759 1.00 28.67 P
ATOM 3 OP1 G A 446 51.642 129.202 54.780 1.00 26.13 O
ATOM 4 OP2 G A 446 49.269 129.720 55.632 1.00 24.51 O
ATOM 5 O5' G A 446 50.821 131.574 55.059 1.00 26.47 O
ATOM 6 C5' G A 446 50.716 132.103 56.393 1.00 26.20 C
ATOM 7 C4' G A 446 50.973 133.581 56.391 1.00 25.61 C
ATOM 8 O4' G A 446 52.285 133.830 55.845 1.00 29.98 O
ATOM 9 C3' G A 446 50.039 134.398 55.525 1.00 26.67 C
ATOM 10 O3' G A 446 48.885 134.708 56.290 1.00 29.25 O
ATOM 11 C2' G A 446 50.871 135.640 55.229 1.00 27.26 C
ATOM 12 O2' G A 446 50.877 136.538 56.326 1.00 24.91 O
ATOM 13 C1' G A 446 52.273 135.041 55.112 1.00 28.15 C
ATOM 14 N9 G A 446 52.813 134.776 53.778 1.00 30.52 N
ATOM 15 C8 G A 446 53.221 133.556 53.283 1.00 31.50 C
ATOM 16 N7 G A 446 53.777 133.637 52.105 1.00 29.52 N
ATOM 17 C5 G A 446 53.706 134.985 51.787 1.00 31.75 C
ATOM 18 C6 G A 446 54.165 135.670 50.650 1.00 31.91 C
ATOM 19 O6 G A 446 54.761 135.213 49.674 1.00 35.64 O
ATOM 20 N1 G A 446 53.883 137.029 50.719 1.00 29.78 N
ATOM 21 C2 G A 446 53.253 137.653 51.763 1.00 30.76 C
ATOM 22 N2 G A 446 53.077 138.978 51.640 1.00 31.07 N
ATOM 23 N3 G A 446 52.827 137.025 52.848 1.00 32.02 N
ATOM 24 C4 G A 446 53.086 135.700 52.794 1.00 31.47 C
ATOM 25 P A A 447 47.448 134.756 55.591 1.00 29.44 P
ATOM 26 OP1 A A 447 46.488 135.038 56.682 1.00 26.67 O
ATOM 27 OP2 A A 447 47.283 133.542 54.760 1.00 28.81 O
ATOM 28 O5' A A 447 47.531 136.022 54.631 1.00 29.70 O
TER
ATOM 1 O3' G B 463 54.651 137.193 60.234 1.00 27.37 O
ATOM 2 P A B 464 53.595 136.697 59.131 1.00 26.86 P
ATOM 3 OP1 A B 464 52.634 135.873 59.895 1.00 29.13 O
ATOM 4 OP2 A B 464 54.270 136.123 57.939 1.00 26.16 O
ATOM 5 O5' A B 464 52.892 138.046 58.678 1.00 26.17 O
ATOM 6 C5' A B 464 51.528 138.306 59.002 1.00 26.79 C
ATOM 7 C4' A B 464 51.412 138.768 60.429 1.00 27.54 C
ATOM 8 O4' A B 464 52.292 139.898 60.668 1.00 28.56 O
ATOM 9 C3' A B 464 50.026 139.283 60.746 1.00 29.20 C
ATOM 10 O3' A B 464 49.170 138.210 61.087 1.00 29.78 O
ATOM 11 C2' A B 464 50.283 140.259 61.883 1.00 28.59 C
ATOM 12 O2' A B 464 50.440 139.596 63.117 1.00 30.06 O
ATOM 13 C1' A B 464 51.612 140.884 61.439 1.00 26.96 C
ATOM 14 N9 A B 464 51.450 142.074 60.594 1.00 24.97 N
ATOM 15 C8 A B 464 51.874 142.217 59.298 1.00 25.92 C
ATOM 16 N7 A B 464 51.605 143.388 58.778 1.00 25.36 N
ATOM 17 C5 A B 464 50.963 144.063 59.798 1.00 23.73 C
ATOM 18 C6 A B 464 50.441 145.356 59.876 1.00 25.31 C
ATOM 19 N6 A B 464 50.509 146.237 58.880 1.00 26.13 N
ATOM 20 N1 A B 464 49.846 145.724 61.026 1.00 25.46 N
ATOM 21 C2 A B 464 49.806 144.846 62.032 1.00 25.24 C
ATOM 22 N3 A B 464 50.279 143.605 62.086 1.00 26.91 N
ATOM 23 C4 A B 464 50.852 143.268 60.920 1.00 23.51 C
ATOM 24 P A B 465 47.762 138.057 60.343 1.00 28.94 P
ATOM 25 OP1 A B 465 47.187 136.744 60.707 1.00 31.07 O
ATOM 26 OP2 A B 465 47.944 138.403 58.913 1.00 30.33 O
ATOM 27 O5' A B 465 46.878 139.192 61.017 1.00 30.28 O
TER
ATOM 2 P G A 446 50.423 130.059 54.759 1.00 28.67 P
ATOM 3 OP1 G A 446 51.642 129.202 54.780 1.00 26.13 O
ATOM 4 OP2 G A 446 49.269 129.720 55.632 1.00 24.51 O
ATOM 5 O5' G A 446 50.821 131.574 55.059 1.00 26.47 O
ATOM 6 C5' G A 446 50.716 132.103 56.393 1.00 26.20 C
ATOM 7 C4' G A 446 50.973 133.581 56.391 1.00 25.61 C
ATOM 8 O4' G A 446 52.285 133.830 55.845 1.00 29.98 O
ATOM 9 C3' G A 446 50.039 134.398 55.525 1.00 26.67 C
ATOM 10 O3' G A 446 48.885 134.708 56.290 1.00 29.25 O
ATOM 11 C2' G A 446 50.871 135.640 55.229 1.00 27.26 C
ATOM 12 O2' G A 446 50.877 136.538 56.326 1.00 24.91 O
ATOM 13 C1' G A 446 52.273 135.041 55.112 1.00 28.15 C
ATOM 14 N9 G A 446 52.813 134.776 53.778 1.00 30.52 N
ATOM 15 C8 G A 446 53.221 133.556 53.283 1.00 31.50 C
ATOM 16 N7 G A 446 53.777 133.637 52.105 1.00 29.52 N
ATOM 17 C5 G A 446 53.706 134.985 51.787 1.00 31.75 C
ATOM 18 C6 G A 446 54.165 135.670 50.650 1.00 31.91 C
ATOM 19 O6 G A 446 54.761 135.213 49.674 1.00 35.64 O
ATOM 20 N1 G A 446 53.883 137.029 50.719 1.00 29.78 N
ATOM 21 C2 G A 446 53.253 137.653 51.763 1.00 30.76 C
ATOM 22 N2 G A 446 53.077 138.978 51.640 1.00 31.07 N
ATOM 23 N3 G A 446 52.827 137.025 52.848 1.00 32.02 N
ATOM 24 C4 G A 446 53.086 135.700 52.794 1.00 31.47 C
ATOM 25 P A A 447 47.448 134.756 55.591 1.00 29.44 P
ATOM 26 OP1 A A 447 46.488 135.038 56.682 1.00 26.67 O
ATOM 27 OP2 A A 447 47.283 133.542 54.760 1.00 28.81 O
ATOM 28 O5' A A 447 47.531 136.022 54.631 1.00 29.70 O
TER
ATOM 1 O3' G B 463 54.651 137.193 60.234 1.00 27.37 O
ATOM 2 P A B 464 53.595 136.697 59.131 1.00 26.86 P
ATOM 3 OP1 A B 464 52.634 135.873 59.895 1.00 29.13 O
ATOM 4 OP2 A B 464 54.270 136.123 57.939 1.00 26.16 O
ATOM 5 O5' A B 464 52.892 138.046 58.678 1.00 26.17 O
ATOM 6 C5' A B 464 51.528 138.306 59.002 1.00 26.79 C
ATOM 7 C4' A B 464 51.412 138.768 60.429 1.00 27.54 C
ATOM 8 O4' A B 464 52.292 139.898 60.668 1.00 28.56 O
ATOM 9 C3' A B 464 50.026 139.283 60.746 1.00 29.20 C
ATOM 10 O3' A B 464 49.170 138.210 61.087 1.00 29.78 O
ATOM 11 C2' A B 464 50.283 140.259 61.883 1.00 28.59 C
ATOM 12 O2' A B 464 50.440 139.596 63.117 1.00 30.06 O
ATOM 13 C1' A B 464 51.612 140.884 61.439 1.00 26.96 C
ATOM 14 N9 A B 464 51.450 142.074 60.594 1.00 24.97 N
ATOM 15 C8 A B 464 51.874 142.217 59.298 1.00 25.92 C
ATOM 16 N7 A B 464 51.605 143.388 58.778 1.00 25.36 N
ATOM 17 C5 A B 464 50.963 144.063 59.798 1.00 23.73 C
ATOM 18 C6 A B 464 50.441 145.356 59.876 1.00 25.31 C
ATOM 19 N6 A B 464 50.509 146.237 58.880 1.00 26.13 N
ATOM 20 N1 A B 464 49.846 145.724 61.026 1.00 25.46 N
ATOM 21 C2 A B 464 49.806 144.846 62.032 1.00 25.24 C
ATOM 22 N3 A B 464 50.279 143.605 62.086 1.00 26.91 N
ATOM 23 C4 A B 464 50.852 143.268 60.920 1.00 23.51 C
ATOM 24 P A B 465 47.762 138.057 60.343 1.00 28.94 P
ATOM 25 OP1 A B 465 47.187 136.744 60.707 1.00 31.07 O
ATOM 26 OP2 A B 465 47.944 138.403 58.913 1.00 30.33 O
ATOM 27 O5' A B 465 46.878 139.192 61.017 1.00 30.28 O
TER
Atoms:
OP1: (51.642,129.202,54.780)
OP2: (49.269,129.720,55.632)
C3': (50.039,134.398,55.525)
C1': (52.273,135.041,55.112)
C5': (50.716,132.103,56.393)
O6: (54.761,135.213,49.674)
O4': (52.285,133.830,55.845)
C8: (53.221,133.556,53.283)
C2: (53.253,137.653,51.763)
C6: (54.165,135.670,50.650)
C5: (53.706,134.985,51.787)
C4: (53.086,135.700,52.794)
P: (50.423,130.059,54.759)
C4': (50.973,133.581,56.391)
C2': (50.871,135.640,55.229)
O2': (50.877,136.538,56.326)
N1: (53.883,137.029,50.719)
N2: (53.077,138.978,51.640)
N3: (52.827,137.025,52.848)
N7: (53.777,133.637,52.105)
N9: (52.813,134.776,53.778)
O5': (50.821,131.574,55.059)
O3': (48.885,134.708,56.290)
OP2: (49.269,129.720,55.632)
C3': (50.039,134.398,55.525)
C1': (52.273,135.041,55.112)
C5': (50.716,132.103,56.393)
O6: (54.761,135.213,49.674)
O4': (52.285,133.830,55.845)
C8: (53.221,133.556,53.283)
C2: (53.253,137.653,51.763)
C6: (54.165,135.670,50.650)
C5: (53.706,134.985,51.787)
C4: (53.086,135.700,52.794)
P: (50.423,130.059,54.759)
C4': (50.973,133.581,56.391)
C2': (50.871,135.640,55.229)
O2': (50.877,136.538,56.326)
N1: (53.883,137.029,50.719)
N2: (53.077,138.978,51.640)
N3: (52.827,137.025,52.848)
N7: (53.777,133.637,52.105)
N9: (52.813,134.776,53.778)
O5': (50.821,131.574,55.059)
O3': (48.885,134.708,56.290)
OP1: (52.634,135.873,59.895)
OP2: (54.270,136.123,57.939)
C3': (50.026,139.283,60.746)
C1': (51.612,140.884,61.439)
C5': (51.528,138.306,59.002)
O4': (52.292,139.898,60.668)
C8: (51.874,142.217,59.298)
O2': (50.440,139.596,63.117)
C6: (50.441,145.356,59.876)
C5: (50.963,144.063,59.798)
C4: (50.852,143.268,60.920)
P: (53.595,136.697,59.131)
C4': (51.412,138.768,60.429)
C2': (50.283,140.259,61.883)
C2: (49.806,144.846,62.032)
N1: (49.846,145.724,61.026)
N3: (50.279,143.605,62.086)
N6: (50.509,146.237,58.880)
N7: (51.605,143.388,58.778)
N9: (51.450,142.074,60.594)
O5': (52.892,138.046,58.678)
O3': (49.170,138.210,61.087)
OP2: (54.270,136.123,57.939)
C3': (50.026,139.283,60.746)
C1': (51.612,140.884,61.439)
C5': (51.528,138.306,59.002)
O4': (52.292,139.898,60.668)
C8: (51.874,142.217,59.298)
O2': (50.440,139.596,63.117)
C6: (50.441,145.356,59.876)
C5: (50.963,144.063,59.798)
C4: (50.852,143.268,60.920)
P: (53.595,136.697,59.131)
C4': (51.412,138.768,60.429)
C2': (50.283,140.259,61.883)
C2: (49.806,144.846,62.032)
N1: (49.846,145.724,61.026)
N3: (50.279,143.605,62.086)
N6: (50.509,146.237,58.880)
N7: (51.605,143.388,58.778)
N9: (51.450,142.074,60.594)
O5': (52.892,138.046,58.678)
O3': (49.170,138.210,61.087)
Image (generated by PyMOL):