ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01806:01844

Extra

PDB:
ATOM 1 O3' A A1805 115.778 138.919 81.291 1.00 36.66 O
ATOM 2 P G A1806 116.700 137.753 80.687 1.00 39.37 P
ATOM 3 OP1 G A1806 117.977 138.383 80.278 1.00 39.47 O
ATOM 4 OP2 G A1806 115.935 136.949 79.699 1.00 35.42 O
ATOM 5 O5' G A1806 117.000 136.848 81.958 1.00 39.61 O
ATOM 6 C5' G A1806 117.689 137.404 83.094 1.00 40.98 C
ATOM 7 C4' G A1806 117.654 136.442 84.253 1.00 39.49 C
ATOM 8 O4' G A1806 116.306 136.345 84.786 1.00 38.24 O
ATOM 9 C3' G A1806 117.999 135.011 83.903 1.00 39.28 C
ATOM 10 O3' G A1806 119.388 134.796 83.756 1.00 40.93 O
ATOM 11 C2' G A1806 117.394 134.260 85.071 1.00 40.04 C
ATOM 12 O2' G A1806 118.174 134.364 86.238 1.00 40.94 O
ATOM 13 C1' G A1806 116.079 135.023 85.252 1.00 40.16 C
ATOM 14 N9 G A1806 115.030 134.399 84.444 1.00 40.08 N
ATOM 15 C8 G A1806 114.651 134.718 83.158 1.00 38.83 C
ATOM 16 N7 G A1806 113.756 133.902 82.672 1.00 37.99 N
ATOM 17 C5 G A1806 113.515 133.000 83.701 1.00 39.57 C
ATOM 18 C6 G A1806 112.670 131.856 83.750 1.00 38.92 C
ATOM 19 O6 G A1806 111.952 131.389 82.859 1.00 39.48 O
ATOM 20 N1 G A1806 112.728 131.230 84.991 1.00 38.23 N
ATOM 21 C2 G A1806 113.504 131.637 86.046 1.00 39.41 C
ATOM 22 N2 G A1806 113.408 130.910 87.168 1.00 38.67 N
ATOM 23 N3 G A1806 114.311 132.684 86.008 1.00 39.52 N
ATOM 24 C4 G A1806 114.268 133.314 84.813 1.00 39.79 C
ATOM 25 P G A1807 119.903 133.681 82.723 1.00 42.99 P
ATOM 26 OP1 G A1807 121.383 133.728 82.696 1.00 42.52 O
ATOM 27 OP2 G A1807 119.148 133.820 81.452 1.00 41.50 O
ATOM 28 O5' G A1807 119.457 132.320 83.417 1.00 43.75 O
TER

ATOM 1 O3' A B1843 116.041 135.373 89.033 1.00 41.58 O
ATOM 2 P A B1844 117.117 134.429 89.762 1.00 44.02 P
ATOM 3 OP1 A B1844 118.110 134.057 88.734 1.00 42.47 O
ATOM 4 OP2 A B1844 116.405 133.357 90.512 1.00 43.34 O
ATOM 5 O5' A B1844 117.806 135.385 90.834 1.00 43.43 O
ATOM 6 C5' A B1844 118.502 136.579 90.429 1.00 46.94 C
ATOM 7 C4' A B1844 118.915 137.373 91.645 1.00 50.21 C
ATOM 8 O4' A B1844 117.730 137.716 92.419 1.00 50.83 O
ATOM 9 C3' A B1844 119.798 136.627 92.634 1.00 51.90 C
ATOM 10 O3' A B1844 121.171 136.657 92.254 1.00 53.50 O
ATOM 11 C2' A B1844 119.525 137.378 93.928 1.00 51.97 C
ATOM 12 O2' A B1844 120.214 138.608 93.982 1.00 52.05 O
ATOM 13 C1' A B1844 118.020 137.638 93.809 1.00 51.33 C
ATOM 14 N9 A B1844 117.235 136.538 94.373 1.00 51.58 N
ATOM 15 C8 A B1844 116.462 135.624 93.693 1.00 52.94 C
ATOM 16 N7 A B1844 115.915 134.715 94.464 1.00 53.29 N
ATOM 17 C5 A B1844 116.346 135.059 95.739 1.00 53.60 C
ATOM 18 C6 A B1844 116.124 134.477 97.001 1.00 53.81 C
ATOM 19 N6 A B1844 115.379 133.384 97.188 1.00 53.69 N
ATOM 20 N1 A B1844 116.703 135.062 98.074 1.00 53.42 N
ATOM 21 C2 A B1844 117.454 136.152 97.881 1.00 52.55 C
ATOM 22 N3 A B1844 117.740 136.790 96.746 1.00 53.46 N
ATOM 23 C4 A B1844 117.149 136.187 95.699 1.00 52.95 C
ATOM 24 P U B1845 122.100 135.360 92.487 1.00 55.06 P
ATOM 25 OP1 U B1845 123.504 135.765 92.213 1.00 57.21 O
ATOM 26 OP2 U B1845 121.517 134.206 91.743 1.00 52.40 O
ATOM 27 O5' U B1845 121.983 135.087 94.050 1.00 52.15 O
TER

Atoms:
OP1: (117.977,138.383,80.278)
OP2: (115.935,136.949,79.699)
C3': (117.999,135.011,83.903)
C1': (116.079,135.023,85.252)
C5': (117.689,137.404,83.094)
O6: (111.952,131.389,82.859)
O4': (116.306,136.345,84.786)
C8: (114.651,134.718,83.158)
C2: (113.504,131.637,86.046)
C6: (112.670,131.856,83.750)
C5: (113.515,133.000,83.701)
C4: (114.268,133.314,84.813)
P: (116.700,137.753,80.687)
C4': (117.654,136.442,84.253)
C2': (117.394,134.260,85.071)
O2': (118.174,134.364,86.238)
N1: (112.728,131.230,84.991)
N2: (113.408,130.910,87.168)
N3: (114.311,132.684,86.008)
N7: (113.756,133.902,82.672)
N9: (115.030,134.399,84.444)
O5': (117.000,136.848,81.958)
O3': (119.388,134.796,83.756)
OP1: (118.110,134.057,88.734)
OP2: (116.405,133.357,90.512)
C3': (119.798,136.627,92.634)
C1': (118.020,137.638,93.809)
C5': (118.502,136.579,90.429)
O4': (117.730,137.716,92.419)
C8: (116.462,135.624,93.693)
O2': (120.214,138.608,93.982)
C6: (116.124,134.477,97.001)
C5: (116.346,135.059,95.739)
C4: (117.149,136.187,95.699)
P: (117.117,134.429,89.762)
C4': (118.915,137.373,91.645)
C2': (119.525,137.378,93.928)
C2: (117.454,136.152,97.881)
N1: (116.703,135.062,98.074)
N3: (117.740,136.790,96.746)
N6: (115.379,133.384,97.188)
N7: (115.915,134.715,94.464)
N9: (117.235,136.538,94.373)
O5': (117.806,135.385,90.834)
O3': (121.171,136.657,92.254)
Image (generated by PyMOL):
PyMOL image
show in jmol