Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1410:A1409
Extra
PDB:
ATOM 1 O3' A A1409 6.275 -64.113 28.133 1.00 54.02 O
ATOM 2 P U A1410 6.940 -64.987 29.294 1.00 57.47 P
ATOM 3 OP1 U A1410 8.072 -65.803 28.778 1.00 54.75 O
ATOM 4 OP2 U A1410 5.790 -65.660 29.955 1.00 68.50 O
ATOM 5 O5' U A1410 7.559 -63.906 30.290 1.00 58.08 O
ATOM 6 C5' U A1410 7.916 -64.262 31.623 1.00 58.07 C
ATOM 7 C4' U A1410 8.383 -63.046 32.381 1.00 60.16 C
ATOM 8 O4' U A1410 9.702 -62.667 31.908 1.00 65.70 O
ATOM 9 C3' U A1410 7.492 -61.813 32.247 1.00 54.09 C
ATOM 10 O3' U A1410 7.558 -61.067 33.461 1.00 53.80 O
ATOM 11 C2' U A1410 8.219 -61.005 31.171 1.00 60.69 C
ATOM 12 O2' U A1410 8.009 -59.614 31.269 1.00 61.05 O
ATOM 13 C1' U A1410 9.680 -61.324 31.492 1.00 64.25 C
ATOM 14 N1 U A1410 10.680 -61.163 30.426 1.00 64.20 N
ATOM 15 C2 U A1410 11.924 -60.660 30.798 1.00 62.74 C
ATOM 16 O2 U A1410 12.192 -60.325 31.944 1.00 58.20 O
ATOM 17 N3 U A1410 12.844 -60.571 29.780 1.00 61.30 N
ATOM 18 C4 U A1410 12.659 -60.929 28.456 1.00 68.10 C
ATOM 19 O4 U A1410 13.616 -60.898 27.683 1.00 71.90 O
ATOM 20 C5 U A1410 11.353 -61.415 28.145 1.00 65.69 C
ATOM 21 C6 U A1410 10.428 -61.510 29.111 1.00 62.68 C
ATOM 22 P G A1411 6.857 -61.610 34.812 1.00 64.09 P
ATOM 23 OP1 G A1411 7.074 -63.072 35.050 1.00 55.43 O
ATOM 24 OP2 G A1411 5.475 -61.047 34.840 1.00 58.79 O
ATOM 25 O5' G A1411 7.726 -60.895 35.929 1.00 58.77 O
TER
ATOM 1 O3' C B1408 2.432 -59.631 27.222 1.00 77.55 O
ATOM 2 P A B1409 2.039 -60.082 28.718 1.00 82.36 P
ATOM 3 OP1 A B1409 0.630 -60.589 28.734 1.00 65.42 O
ATOM 4 OP2 A B1409 2.443 -58.988 29.662 1.00 66.75 O
ATOM 5 O5' A B1409 3.039 -61.298 28.965 1.00 76.19 O
ATOM 6 C5' A B1409 2.916 -62.516 28.224 1.00 71.32 C
ATOM 7 C4' A B1409 4.250 -62.951 27.614 1.00 69.42 C
ATOM 8 O4' A B1409 4.575 -62.200 26.408 1.00 71.82 O
ATOM 9 C3' A B1409 5.511 -62.966 28.467 1.00 63.34 C
ATOM 10 O3' A B1409 6.275 -64.113 28.133 1.00 54.02 O
ATOM 11 C2' A B1409 6.295 -61.777 27.941 1.00 59.83 C
ATOM 12 O2' A B1409 7.685 -61.902 28.153 1.00 60.35 O
ATOM 13 C1' A B1409 5.930 -61.797 26.451 1.00 58.00 C
ATOM 14 N9 A B1409 6.030 -60.484 25.804 1.00 54.93 N
ATOM 15 C8 A B1409 6.146 -59.275 26.448 1.00 60.76 C
ATOM 16 N7 A B1409 6.163 -58.242 25.644 1.00 59.93 N
ATOM 17 C5 A B1409 6.060 -58.802 24.380 1.00 55.37 C
ATOM 18 C6 A B1409 6.000 -58.222 23.103 1.00 55.23 C
ATOM 19 N6 A B1409 6.009 -56.903 22.886 1.00 62.20 N
ATOM 20 N1 A B1409 5.911 -59.049 22.043 1.00 53.59 N
ATOM 21 C2 A B1409 5.870 -60.370 22.263 1.00 54.54 C
ATOM 22 N3 A B1409 5.904 -61.039 23.421 1.00 58.93 N
ATOM 23 C4 A B1409 5.999 -60.186 24.457 1.00 55.88 C
ATOM 24 P U B1410 6.940 -64.987 29.294 1.00 57.47 P
ATOM 25 OP1 U B1410 8.072 -65.803 28.778 1.00 54.75 O
ATOM 26 OP2 U B1410 5.790 -65.660 29.955 1.00 68.50 O
ATOM 27 O5' U B1410 7.559 -63.906 30.290 1.00 58.08 O
TER
ATOM 2 P U A1410 6.940 -64.987 29.294 1.00 57.47 P
ATOM 3 OP1 U A1410 8.072 -65.803 28.778 1.00 54.75 O
ATOM 4 OP2 U A1410 5.790 -65.660 29.955 1.00 68.50 O
ATOM 5 O5' U A1410 7.559 -63.906 30.290 1.00 58.08 O
ATOM 6 C5' U A1410 7.916 -64.262 31.623 1.00 58.07 C
ATOM 7 C4' U A1410 8.383 -63.046 32.381 1.00 60.16 C
ATOM 8 O4' U A1410 9.702 -62.667 31.908 1.00 65.70 O
ATOM 9 C3' U A1410 7.492 -61.813 32.247 1.00 54.09 C
ATOM 10 O3' U A1410 7.558 -61.067 33.461 1.00 53.80 O
ATOM 11 C2' U A1410 8.219 -61.005 31.171 1.00 60.69 C
ATOM 12 O2' U A1410 8.009 -59.614 31.269 1.00 61.05 O
ATOM 13 C1' U A1410 9.680 -61.324 31.492 1.00 64.25 C
ATOM 14 N1 U A1410 10.680 -61.163 30.426 1.00 64.20 N
ATOM 15 C2 U A1410 11.924 -60.660 30.798 1.00 62.74 C
ATOM 16 O2 U A1410 12.192 -60.325 31.944 1.00 58.20 O
ATOM 17 N3 U A1410 12.844 -60.571 29.780 1.00 61.30 N
ATOM 18 C4 U A1410 12.659 -60.929 28.456 1.00 68.10 C
ATOM 19 O4 U A1410 13.616 -60.898 27.683 1.00 71.90 O
ATOM 20 C5 U A1410 11.353 -61.415 28.145 1.00 65.69 C
ATOM 21 C6 U A1410 10.428 -61.510 29.111 1.00 62.68 C
ATOM 22 P G A1411 6.857 -61.610 34.812 1.00 64.09 P
ATOM 23 OP1 G A1411 7.074 -63.072 35.050 1.00 55.43 O
ATOM 24 OP2 G A1411 5.475 -61.047 34.840 1.00 58.79 O
ATOM 25 O5' G A1411 7.726 -60.895 35.929 1.00 58.77 O
TER
ATOM 1 O3' C B1408 2.432 -59.631 27.222 1.00 77.55 O
ATOM 2 P A B1409 2.039 -60.082 28.718 1.00 82.36 P
ATOM 3 OP1 A B1409 0.630 -60.589 28.734 1.00 65.42 O
ATOM 4 OP2 A B1409 2.443 -58.988 29.662 1.00 66.75 O
ATOM 5 O5' A B1409 3.039 -61.298 28.965 1.00 76.19 O
ATOM 6 C5' A B1409 2.916 -62.516 28.224 1.00 71.32 C
ATOM 7 C4' A B1409 4.250 -62.951 27.614 1.00 69.42 C
ATOM 8 O4' A B1409 4.575 -62.200 26.408 1.00 71.82 O
ATOM 9 C3' A B1409 5.511 -62.966 28.467 1.00 63.34 C
ATOM 10 O3' A B1409 6.275 -64.113 28.133 1.00 54.02 O
ATOM 11 C2' A B1409 6.295 -61.777 27.941 1.00 59.83 C
ATOM 12 O2' A B1409 7.685 -61.902 28.153 1.00 60.35 O
ATOM 13 C1' A B1409 5.930 -61.797 26.451 1.00 58.00 C
ATOM 14 N9 A B1409 6.030 -60.484 25.804 1.00 54.93 N
ATOM 15 C8 A B1409 6.146 -59.275 26.448 1.00 60.76 C
ATOM 16 N7 A B1409 6.163 -58.242 25.644 1.00 59.93 N
ATOM 17 C5 A B1409 6.060 -58.802 24.380 1.00 55.37 C
ATOM 18 C6 A B1409 6.000 -58.222 23.103 1.00 55.23 C
ATOM 19 N6 A B1409 6.009 -56.903 22.886 1.00 62.20 N
ATOM 20 N1 A B1409 5.911 -59.049 22.043 1.00 53.59 N
ATOM 21 C2 A B1409 5.870 -60.370 22.263 1.00 54.54 C
ATOM 22 N3 A B1409 5.904 -61.039 23.421 1.00 58.93 N
ATOM 23 C4 A B1409 5.999 -60.186 24.457 1.00 55.88 C
ATOM 24 P U B1410 6.940 -64.987 29.294 1.00 57.47 P
ATOM 25 OP1 U B1410 8.072 -65.803 28.778 1.00 54.75 O
ATOM 26 OP2 U B1410 5.790 -65.660 29.955 1.00 68.50 O
ATOM 27 O5' U B1410 7.559 -63.906 30.290 1.00 58.08 O
TER
Atoms:
C4: (12.659,-60.929,28.456)
N3: (12.844,-60.571,29.780)
OP1: (8.072,-65.803,28.778)
OP2: (5.790,-65.660,29.955)
C2: (11.924,-60.660,30.798)
C1': (9.680,-61.324,31.492)
C3': (7.492,-61.813,32.247)
O5': (7.559,-63.906,30.290)
O4': (9.702,-62.667,31.908)
C5': (7.916,-64.262,31.623)
P: (6.940,-64.987,29.294)
C4': (8.383,-63.046,32.381)
C2': (8.219,-61.005,31.171)
O2': (8.009,-59.614,31.269)
N1: (10.680,-61.163,30.426)
O4: (13.616,-60.898,27.683)
O2: (12.192,-60.325,31.944)
C6: (10.428,-61.510,29.111)
C5: (11.353,-61.415,28.145)
O3': (7.558,-61.067,33.461)
N3: (12.844,-60.571,29.780)
OP1: (8.072,-65.803,28.778)
OP2: (5.790,-65.660,29.955)
C2: (11.924,-60.660,30.798)
C1': (9.680,-61.324,31.492)
C3': (7.492,-61.813,32.247)
O5': (7.559,-63.906,30.290)
O4': (9.702,-62.667,31.908)
C5': (7.916,-64.262,31.623)
P: (6.940,-64.987,29.294)
C4': (8.383,-63.046,32.381)
C2': (8.219,-61.005,31.171)
O2': (8.009,-59.614,31.269)
N1: (10.680,-61.163,30.426)
O4: (13.616,-60.898,27.683)
O2: (12.192,-60.325,31.944)
C6: (10.428,-61.510,29.111)
C5: (11.353,-61.415,28.145)
O3': (7.558,-61.067,33.461)
OP1: (0.630,-60.589,28.734)
OP2: (2.443,-58.988,29.662)
C3': (5.511,-62.966,28.467)
C1': (5.930,-61.797,26.451)
C5': (2.916,-62.516,28.224)
O4': (4.575,-62.200,26.408)
C8: (6.146,-59.275,26.448)
O2': (7.685,-61.902,28.153)
C6: (6.000,-58.222,23.103)
C5: (6.060,-58.802,24.380)
C4: (5.999,-60.186,24.457)
P: (2.039,-60.082,28.718)
C4': (4.250,-62.951,27.614)
C2': (6.295,-61.777,27.941)
C2: (5.870,-60.370,22.263)
N1: (5.911,-59.049,22.043)
N3: (5.904,-61.039,23.421)
N6: (6.009,-56.903,22.886)
N7: (6.163,-58.242,25.644)
N9: (6.030,-60.484,25.804)
O5': (3.039,-61.298,28.965)
O3': (6.275,-64.113,28.133)
OP2: (2.443,-58.988,29.662)
C3': (5.511,-62.966,28.467)
C1': (5.930,-61.797,26.451)
C5': (2.916,-62.516,28.224)
O4': (4.575,-62.200,26.408)
C8: (6.146,-59.275,26.448)
O2': (7.685,-61.902,28.153)
C6: (6.000,-58.222,23.103)
C5: (6.060,-58.802,24.380)
C4: (5.999,-60.186,24.457)
P: (2.039,-60.082,28.718)
C4': (4.250,-62.951,27.614)
C2': (6.295,-61.777,27.941)
C2: (5.870,-60.370,22.263)
N1: (5.911,-59.049,22.043)
N3: (5.904,-61.039,23.421)
N6: (6.009,-56.903,22.886)
N7: (6.163,-58.242,25.644)
N9: (6.030,-60.484,25.804)
O5': (3.039,-61.298,28.965)
O3': (6.275,-64.113,28.133)
Image (generated by PyMOL):