ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8T:B44:B37

Extra

PDB:
ATOM 1 O3' A A 43 -126.076 161.819 119.502 1.00 58.52 O
ATOM 2 P A A 44 -126.300 162.944 120.609 1.00 54.85 P
ATOM 3 OP1 A A 44 -127.078 162.316 121.704 1.00 54.85 O
ATOM 4 OP2 A A 44 -126.862 164.130 119.919 1.00 54.85 O
ATOM 5 O5' A A 44 -124.818 163.256 121.101 1.00 54.85 O
ATOM 6 C5' A A 44 -124.469 163.141 122.475 1.00 54.85 C
ATOM 7 C4' A A 44 -123.074 163.639 122.733 1.00 54.85 C
ATOM 8 O4' A A 44 -122.250 163.389 121.570 1.00 54.85 O
ATOM 9 C3' A A 44 -122.931 165.131 122.959 1.00 54.85 C
ATOM 10 O3' A A 44 -123.263 165.533 124.273 1.00 54.85 O
ATOM 11 C2' A A 44 -121.479 165.374 122.601 1.00 54.85 C
ATOM 12 O2' A A 44 -120.628 164.954 123.649 1.00 54.85 O
ATOM 13 C1' A A 44 -121.302 164.421 121.428 1.00 54.85 C
ATOM 14 N9 A A 44 -121.523 165.091 120.138 1.00 55.43 N
ATOM 15 C8 A A 44 -122.568 164.937 119.259 1.00 55.43 C
ATOM 16 N7 A A 44 -122.448 165.687 118.188 1.00 55.43 N
ATOM 17 C5 A A 44 -121.249 166.377 118.370 1.00 55.43 C
ATOM 18 C6 A A 44 -120.551 167.331 117.597 1.00 55.43 C
ATOM 19 N6 A A 44 -120.972 167.788 116.419 1.00 55.43 N
ATOM 20 N1 A A 44 -119.385 167.818 118.065 1.00 55.43 N
ATOM 21 C2 A A 44 -118.952 167.370 119.247 1.00 55.43 C
ATOM 22 N3 A A 44 -119.513 166.480 120.069 1.00 55.43 N
ATOM 23 C4 A A 44 -120.673 166.016 119.570 1.00 55.43 C
ATOM 24 P C A 45 -123.411 167.100 124.612 1.00 49.64 P
ATOM 25 OP1 C A 45 -123.316 167.252 126.085 1.00 49.64 O
ATOM 26 OP2 C A 45 -124.634 167.588 123.923 1.00 49.64 O
ATOM 27 O5' C A 45 -122.128 167.719 123.936 1.00 49.64 O
TER

ATOM 1 O3' C B 36 -116.539 177.214 118.466 1.00 58.55 O
ATOM 2 P A B 37 -115.633 176.471 117.373 1.00 62.59 P
ATOM 3 OP1 A B 37 -114.300 176.249 117.987 1.00 62.59 O
ATOM 4 OP2 A B 37 -115.729 177.259 116.115 1.00 62.59 O
ATOM 5 O5' A B 37 -116.364 175.085 117.185 1.00 62.59 O
ATOM 6 C5' A B 37 -115.645 173.881 117.333 1.00 62.59 C
ATOM 7 C4' A B 37 -116.565 172.738 117.626 1.00 62.59 C
ATOM 8 O4' A B 37 -117.936 173.191 117.566 1.00 62.59 O
ATOM 9 C3' A B 37 -116.503 171.598 116.640 1.00 62.59 C
ATOM 10 O3' A B 37 -115.450 170.715 116.922 1.00 62.59 O
ATOM 11 C2' A B 37 -117.877 170.970 116.754 1.00 62.59 C
ATOM 12 O2' A B 37 -117.960 170.147 117.899 1.00 62.59 O
ATOM 13 C1' A B 37 -118.746 172.199 116.979 1.00 62.59 C
ATOM 14 N9 A B 37 -119.296 172.737 115.721 1.00 62.85 N
ATOM 15 C8 A B 37 -118.892 173.889 115.082 1.00 62.85 C
ATOM 16 N7 A B 37 -119.579 174.144 113.990 1.00 62.85 N
ATOM 17 C5 A B 37 -120.507 173.104 113.905 1.00 62.85 C
ATOM 18 C6 A B 37 -121.524 172.798 112.972 1.00 62.85 C
ATOM 19 N6 A B 37 -121.813 173.525 111.889 1.00 62.85 N
ATOM 20 N1 A B 37 -122.250 171.685 113.196 1.00 62.85 N
ATOM 21 C2 A B 37 -121.978 170.939 114.272 1.00 62.85 C
ATOM 22 N3 A B 37 -121.059 171.119 115.217 1.00 62.85 N
ATOM 23 C4 A B 37 -120.345 172.232 114.975 1.00 62.85 C
ATOM 24 P U B 38 -114.291 170.472 115.842 1.00 61.61 P
ATOM 25 OP1 U B 38 -112.992 170.700 116.533 1.00 61.61 O
ATOM 26 OP2 U B 38 -114.619 171.286 114.651 1.00 61.61 O
ATOM 27 O5' U B 38 -114.474 168.934 115.514 1.00 61.61 O
TER

Atoms:
OP1: (-127.078,162.316,121.704)
OP2: (-126.862,164.130,119.919)
C3': (-122.931,165.131,122.959)
C1': (-121.302,164.421,121.428)
C5': (-124.469,163.141,122.475)
O4': (-122.250,163.389,121.570)
C8: (-122.568,164.937,119.259)
O2': (-120.628,164.954,123.649)
C6: (-120.551,167.331,117.597)
C5: (-121.249,166.377,118.370)
C4: (-120.673,166.016,119.570)
P: (-126.300,162.944,120.609)
C4': (-123.074,163.639,122.733)
C2': (-121.479,165.374,122.601)
C2: (-118.952,167.370,119.247)
N1: (-119.385,167.818,118.065)
N3: (-119.513,166.480,120.069)
N6: (-120.972,167.788,116.419)
N7: (-122.448,165.687,118.188)
N9: (-121.523,165.091,120.138)
O5': (-124.818,163.256,121.101)
O3': (-123.263,165.533,124.273)
OP1: (-114.300,176.249,117.987)
OP2: (-115.729,177.259,116.115)
C3': (-116.503,171.598,116.640)
C1': (-118.746,172.199,116.979)
C5': (-115.645,173.881,117.333)
O4': (-117.936,173.191,117.566)
C8: (-118.892,173.889,115.082)
O2': (-117.960,170.147,117.899)
C6: (-121.524,172.798,112.972)
C5: (-120.507,173.104,113.905)
C4: (-120.345,172.232,114.975)
P: (-115.633,176.471,117.373)
C4': (-116.565,172.738,117.626)
C2': (-117.877,170.970,116.754)
C2: (-121.978,170.939,114.272)
N1: (-122.250,171.685,113.196)
N3: (-121.059,171.119,115.217)
N6: (-121.813,173.525,111.889)
N7: (-119.579,174.144,113.990)
N9: (-119.296,172.737,115.721)
O5': (-116.364,175.085,117.185)
O3': (-115.450,170.715,116.922)
Image (generated by PyMOL):
PyMOL image
show in jmol