Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:13025:1442
Extra
PDB:
ATOM 1 O3' C A3024 103.672 14.831 18.217 1.00 47.37 O
ATOM 2 P A A3025 103.295 16.294 17.697 1.00 46.56 P
ATOM 3 OP1 A A3025 103.343 16.267 16.203 1.00 46.95 O
ATOM 4 OP2 A A3025 104.151 17.265 18.422 1.00 46.70 O
ATOM 5 O5' A A3025 101.778 16.406 18.196 1.00 46.11 O
ATOM 6 C5' A A3025 101.476 16.237 19.559 1.00 45.69 C
ATOM 7 C4' A A3025 100.020 16.031 19.774 1.00 45.29 C
ATOM 8 O4' A A3025 99.735 14.610 19.831 1.00 45.05 O
ATOM 9 C3' A A3025 99.478 16.596 21.068 1.00 44.94 C
ATOM 10 O3' A A3025 99.051 17.929 20.909 1.00 45.05 O
ATOM 11 C2' A A3025 98.337 15.677 21.395 1.00 44.50 C
ATOM 12 O2' A A3025 97.200 16.092 20.681 1.00 44.48 O
ATOM 13 C1' A A3025 98.812 14.339 20.832 1.00 44.58 C
ATOM 14 N9 A A3025 99.500 13.534 21.835 1.00 44.42 N
ATOM 15 C8 A A3025 100.811 13.264 21.792 1.00 44.69 C
ATOM 16 N7 A A3025 101.219 12.515 22.777 1.00 44.49 N
ATOM 17 C5 A A3025 100.115 12.286 23.526 1.00 44.05 C
ATOM 18 C6 A A3025 99.916 11.568 24.698 1.00 43.69 C
ATOM 19 N6 A A3025 100.827 10.900 25.390 1.00 43.70 N
ATOM 20 N1 A A3025 98.678 11.555 25.174 1.00 43.32 N
ATOM 21 C2 A A3025 97.724 12.206 24.520 1.00 43.31 C
ATOM 22 N3 A A3025 97.785 12.920 23.409 1.00 43.63 N
ATOM 23 C4 A A3025 99.041 12.912 22.949 1.00 44.00 C
ATOM 24 P A A3026 99.361 19.020 22.034 1.00 64.80 P
ATOM 25 OP1 A A3026 98.996 20.349 21.462 1.00 65.04 O
ATOM 26 OP2 A A3026 100.759 18.791 22.495 1.00 64.98 O
ATOM 27 O5' A A3026 98.340 18.620 23.181 1.00 64.28 O
TER
ATOM 1 O3' C B 441 94.598 8.305 33.358 1.00 78.78 O
ATOM 2 P A B 442 94.092 7.398 32.104 1.00 60.61 P
ATOM 3 OP1 A B 442 92.572 7.499 32.098 1.00 60.31 O
ATOM 4 OP2 A B 442 94.749 6.018 32.196 1.00 60.64 O
ATOM 5 O5' A B 442 94.692 8.199 30.848 1.00 61.00 O
ATOM 6 C5' A B 442 95.572 7.587 29.915 1.00 61.31 C
ATOM 7 C4' A B 442 96.150 8.615 28.969 1.00 61.68 C
ATOM 8 O4' A B 442 97.394 9.124 29.506 1.00 61.88 O
ATOM 9 C3' A B 442 96.498 8.114 27.579 1.00 61.98 C
ATOM 10 O3' A B 442 95.420 8.263 26.700 1.00 61.94 O
ATOM 11 C2' A B 442 97.648 8.989 27.198 1.00 62.36 C
ATOM 12 O2' A B 442 97.153 10.256 26.846 1.00 62.43 O
ATOM 13 C1' A B 442 98.371 9.129 28.520 1.00 62.28 C
ATOM 14 N9 A B 442 99.297 8.003 28.780 1.00 62.35 N
ATOM 15 C8 A B 442 99.158 7.025 29.725 1.00 62.08 C
ATOM 16 N7 A B 442 100.139 6.161 29.739 1.00 62.25 N
ATOM 17 C5 A B 442 101.033 6.598 28.738 1.00 62.66 C
ATOM 18 C6 A B 442 102.286 6.126 28.233 1.00 63.03 C
ATOM 19 N6 A B 442 102.987 5.076 28.616 1.00 63.07 N
ATOM 20 N1 A B 442 102.858 6.786 27.241 1.00 63.39 N
ATOM 21 C2 A B 442 102.214 7.864 26.788 1.00 63.39 C
ATOM 22 N3 A B 442 101.070 8.418 27.157 1.00 63.09 N
ATOM 23 C4 A B 442 100.507 7.734 28.151 1.00 62.73 C
ATOM 24 P G B 443 95.090 7.168 25.571 1.00 44.76 P
ATOM 25 OP1 G B 443 93.707 7.507 25.087 1.00 44.61 O
ATOM 26 OP2 G B 443 95.335 5.835 26.150 1.00 44.61 O
ATOM 27 O5' G B 443 96.188 7.462 24.420 1.00 45.25 O
TER
ATOM 2 P A A3025 103.295 16.294 17.697 1.00 46.56 P
ATOM 3 OP1 A A3025 103.343 16.267 16.203 1.00 46.95 O
ATOM 4 OP2 A A3025 104.151 17.265 18.422 1.00 46.70 O
ATOM 5 O5' A A3025 101.778 16.406 18.196 1.00 46.11 O
ATOM 6 C5' A A3025 101.476 16.237 19.559 1.00 45.69 C
ATOM 7 C4' A A3025 100.020 16.031 19.774 1.00 45.29 C
ATOM 8 O4' A A3025 99.735 14.610 19.831 1.00 45.05 O
ATOM 9 C3' A A3025 99.478 16.596 21.068 1.00 44.94 C
ATOM 10 O3' A A3025 99.051 17.929 20.909 1.00 45.05 O
ATOM 11 C2' A A3025 98.337 15.677 21.395 1.00 44.50 C
ATOM 12 O2' A A3025 97.200 16.092 20.681 1.00 44.48 O
ATOM 13 C1' A A3025 98.812 14.339 20.832 1.00 44.58 C
ATOM 14 N9 A A3025 99.500 13.534 21.835 1.00 44.42 N
ATOM 15 C8 A A3025 100.811 13.264 21.792 1.00 44.69 C
ATOM 16 N7 A A3025 101.219 12.515 22.777 1.00 44.49 N
ATOM 17 C5 A A3025 100.115 12.286 23.526 1.00 44.05 C
ATOM 18 C6 A A3025 99.916 11.568 24.698 1.00 43.69 C
ATOM 19 N6 A A3025 100.827 10.900 25.390 1.00 43.70 N
ATOM 20 N1 A A3025 98.678 11.555 25.174 1.00 43.32 N
ATOM 21 C2 A A3025 97.724 12.206 24.520 1.00 43.31 C
ATOM 22 N3 A A3025 97.785 12.920 23.409 1.00 43.63 N
ATOM 23 C4 A A3025 99.041 12.912 22.949 1.00 44.00 C
ATOM 24 P A A3026 99.361 19.020 22.034 1.00 64.80 P
ATOM 25 OP1 A A3026 98.996 20.349 21.462 1.00 65.04 O
ATOM 26 OP2 A A3026 100.759 18.791 22.495 1.00 64.98 O
ATOM 27 O5' A A3026 98.340 18.620 23.181 1.00 64.28 O
TER
ATOM 1 O3' C B 441 94.598 8.305 33.358 1.00 78.78 O
ATOM 2 P A B 442 94.092 7.398 32.104 1.00 60.61 P
ATOM 3 OP1 A B 442 92.572 7.499 32.098 1.00 60.31 O
ATOM 4 OP2 A B 442 94.749 6.018 32.196 1.00 60.64 O
ATOM 5 O5' A B 442 94.692 8.199 30.848 1.00 61.00 O
ATOM 6 C5' A B 442 95.572 7.587 29.915 1.00 61.31 C
ATOM 7 C4' A B 442 96.150 8.615 28.969 1.00 61.68 C
ATOM 8 O4' A B 442 97.394 9.124 29.506 1.00 61.88 O
ATOM 9 C3' A B 442 96.498 8.114 27.579 1.00 61.98 C
ATOM 10 O3' A B 442 95.420 8.263 26.700 1.00 61.94 O
ATOM 11 C2' A B 442 97.648 8.989 27.198 1.00 62.36 C
ATOM 12 O2' A B 442 97.153 10.256 26.846 1.00 62.43 O
ATOM 13 C1' A B 442 98.371 9.129 28.520 1.00 62.28 C
ATOM 14 N9 A B 442 99.297 8.003 28.780 1.00 62.35 N
ATOM 15 C8 A B 442 99.158 7.025 29.725 1.00 62.08 C
ATOM 16 N7 A B 442 100.139 6.161 29.739 1.00 62.25 N
ATOM 17 C5 A B 442 101.033 6.598 28.738 1.00 62.66 C
ATOM 18 C6 A B 442 102.286 6.126 28.233 1.00 63.03 C
ATOM 19 N6 A B 442 102.987 5.076 28.616 1.00 63.07 N
ATOM 20 N1 A B 442 102.858 6.786 27.241 1.00 63.39 N
ATOM 21 C2 A B 442 102.214 7.864 26.788 1.00 63.39 C
ATOM 22 N3 A B 442 101.070 8.418 27.157 1.00 63.09 N
ATOM 23 C4 A B 442 100.507 7.734 28.151 1.00 62.73 C
ATOM 24 P G B 443 95.090 7.168 25.571 1.00 44.76 P
ATOM 25 OP1 G B 443 93.707 7.507 25.087 1.00 44.61 O
ATOM 26 OP2 G B 443 95.335 5.835 26.150 1.00 44.61 O
ATOM 27 O5' G B 443 96.188 7.462 24.420 1.00 45.25 O
TER
Atoms:
OP1: (103.343,16.267,16.203)
OP2: (104.151,17.265,18.422)
C3': (99.478,16.596,21.068)
C1': (98.812,14.339,20.832)
C5': (101.476,16.237,19.559)
O4': (99.735,14.610,19.831)
C8: (100.811,13.264,21.792)
O2': (97.200,16.092,20.681)
C6: (99.916,11.568,24.698)
C5: (100.115,12.286,23.526)
C4: (99.041,12.912,22.949)
P: (103.295,16.294,17.697)
C4': (100.020,16.031,19.774)
C2': (98.337,15.677,21.395)
C2: (97.724,12.206,24.520)
N1: (98.678,11.555,25.174)
N3: (97.785,12.920,23.409)
N6: (100.827,10.900,25.390)
N7: (101.219,12.515,22.777)
N9: (99.500,13.534,21.835)
O5': (101.778,16.406,18.196)
O3': (99.051,17.929,20.909)
OP2: (104.151,17.265,18.422)
C3': (99.478,16.596,21.068)
C1': (98.812,14.339,20.832)
C5': (101.476,16.237,19.559)
O4': (99.735,14.610,19.831)
C8: (100.811,13.264,21.792)
O2': (97.200,16.092,20.681)
C6: (99.916,11.568,24.698)
C5: (100.115,12.286,23.526)
C4: (99.041,12.912,22.949)
P: (103.295,16.294,17.697)
C4': (100.020,16.031,19.774)
C2': (98.337,15.677,21.395)
C2: (97.724,12.206,24.520)
N1: (98.678,11.555,25.174)
N3: (97.785,12.920,23.409)
N6: (100.827,10.900,25.390)
N7: (101.219,12.515,22.777)
N9: (99.500,13.534,21.835)
O5': (101.778,16.406,18.196)
O3': (99.051,17.929,20.909)
OP1: (92.572,7.499,32.098)
OP2: (94.749,6.018,32.196)
C3': (96.498,8.114,27.579)
C1': (98.371,9.129,28.520)
C5': (95.572,7.587,29.915)
O4': (97.394,9.124,29.506)
C8: (99.158,7.025,29.725)
O2': (97.153,10.256,26.846)
C6: (102.286,6.126,28.233)
C5: (101.033,6.598,28.738)
C4: (100.507,7.734,28.151)
P: (94.092,7.398,32.104)
C4': (96.150,8.615,28.969)
C2': (97.648,8.989,27.198)
C2: (102.214,7.864,26.788)
N1: (102.858,6.786,27.241)
N3: (101.070,8.418,27.157)
N6: (102.987,5.076,28.616)
N7: (100.139,6.161,29.739)
N9: (99.297,8.003,28.780)
O5': (94.692,8.199,30.848)
O3': (95.420,8.263,26.700)
OP2: (94.749,6.018,32.196)
C3': (96.498,8.114,27.579)
C1': (98.371,9.129,28.520)
C5': (95.572,7.587,29.915)
O4': (97.394,9.124,29.506)
C8: (99.158,7.025,29.725)
O2': (97.153,10.256,26.846)
C6: (102.286,6.126,28.233)
C5: (101.033,6.598,28.738)
C4: (100.507,7.734,28.151)
P: (94.092,7.398,32.104)
C4': (96.150,8.615,28.969)
C2': (97.648,8.989,27.198)
C2: (102.214,7.864,26.788)
N1: (102.858,6.786,27.241)
N3: (101.070,8.418,27.157)
N6: (102.987,5.076,28.616)
N7: (100.139,6.161,29.739)
N9: (99.297,8.003,28.780)
O5': (94.692,8.199,30.848)
O3': (95.420,8.263,26.700)
Image (generated by PyMOL):