ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MOJ:A6:A5

Extra

PDB:
ATOM 1 O3' A A 5 -7.338 -6.918 31.750 1.00191.29 O
ATOM 2 P U A 6 -6.624 -5.702 30.981 1.00262.58 P
ATOM 3 OP1 U A 6 -5.440 -5.298 31.772 1.00259.57 O
ATOM 4 OP2 U A 6 -7.651 -4.697 30.626 1.00262.79 O
ATOM 5 O5' U A 6 -6.129 -6.386 29.622 1.00200.63 O
ATOM 6 C5' U A 6 -5.062 -7.320 29.656 1.00207.42 C
ATOM 7 C4' U A 6 -5.342 -8.528 28.777 1.00217.12 C
ATOM 8 O4' U A 6 -6.424 -9.327 29.322 1.00221.03 O
ATOM 9 C3' U A 6 -5.834 -8.240 27.370 1.00217.59 C
ATOM 10 O3' U A 6 -4.785 -7.794 26.527 1.00221.64 O
ATOM 11 C2' U A 6 -6.321 -9.631 26.977 1.00214.57 C
ATOM 12 O2' U A 6 -5.267 -10.510 26.633 1.00207.65 O
ATOM 13 C1' U A 6 -7.001 -10.081 28.268 1.00221.04 C
ATOM 14 N1 U A 6 -8.466 -9.832 28.209 1.00227.63 N
ATOM 15 C2 U A 6 -9.274 -10.774 27.610 1.00226.29 C
ATOM 16 O2 U A 6 -8.844 -11.812 27.136 1.00222.17 O
ATOM 17 N3 U A 6 -10.611 -10.456 27.592 1.00228.24 N
ATOM 18 C4 U A 6 -11.205 -9.313 28.097 1.00228.89 C
ATOM 19 O4 U A 6 -12.421 -9.163 28.008 1.00228.69 O
ATOM 20 C5 U A 6 -10.294 -8.376 28.700 1.00230.41 C
ATOM 21 C6 U A 6 -8.987 -8.665 28.730 1.00231.54 C
ATOM 22 P C A 7 -5.157 -6.890 25.260 1.00265.51 P
ATOM 23 OP1 C A 7 -3.895 -6.549 24.566 1.00265.61 O
ATOM 24 OP2 C A 7 -6.055 -5.809 25.727 1.00261.46 O
ATOM 25 O5' C A 7 -6.007 -7.890 24.337 1.00145.30 O
TER

ATOM 1 O3' C B 4 -10.281 -4.686 36.092 1.00263.61 O
ATOM 2 P A B 5 -10.396 -3.541 34.977 1.00223.47 P
ATOM 3 OP1 A B 5 -9.082 -2.866 34.883 1.00222.57 O
ATOM 4 OP2 A B 5 -11.610 -2.747 35.262 1.00225.04 O
ATOM 5 O5' A B 5 -10.664 -4.350 33.623 1.00179.12 O
ATOM 6 C5' A B 5 -9.591 -4.799 32.807 1.00182.42 C
ATOM 7 C4' A B 5 -9.293 -6.270 33.042 1.00186.45 C
ATOM 8 O4' A B 5 -10.510 -6.961 33.423 1.00191.32 O
ATOM 9 C3' A B 5 -8.766 -7.011 31.820 1.00184.37 C
ATOM 10 O3' A B 5 -7.338 -6.918 31.750 1.00191.29 O
ATOM 11 C2' A B 5 -9.252 -8.439 32.066 1.00176.79 C
ATOM 12 O2' A B 5 -8.386 -9.180 32.900 1.00159.28 O
ATOM 13 C1' A B 5 -10.588 -8.220 32.777 1.00192.63 C
ATOM 14 N9 A B 5 -11.765 -8.247 31.900 1.00205.62 N
ATOM 15 C8 A B 5 -12.298 -7.205 31.190 1.00207.34 C
ATOM 16 N7 A B 5 -13.362 -7.522 30.487 1.00206.25 N
ATOM 17 C5 A B 5 -13.546 -8.870 30.753 1.00210.74 C
ATOM 18 C6 A B 5 -14.508 -9.806 30.312 1.00209.51 C
ATOM 19 N6 A B 5 -15.505 -9.503 29.473 1.00204.82 N
ATOM 20 N1 A B 5 -14.405 -11.073 30.768 1.00210.37 N
ATOM 21 C2 A B 5 -13.407 -11.375 31.608 1.00211.08 C
ATOM 22 N3 A B 5 -12.448 -10.585 32.090 1.00212.71 N
ATOM 23 C4 A B 5 -12.572 -9.332 31.621 1.00211.20 C
ATOM 24 P U B 6 -6.624 -5.702 30.981 1.00262.58 P
ATOM 25 OP1 U B 6 -5.440 -5.298 31.772 1.00259.57 O
ATOM 26 OP2 U B 6 -7.651 -4.697 30.626 1.00262.79 O
ATOM 27 O5' U B 6 -6.129 -6.386 29.622 1.00200.63 O
TER

Atoms:
C4: (-11.205,-9.313,28.097)
N3: (-10.611,-10.456,27.592)
OP1: (-5.440,-5.298,31.772)
OP2: (-7.651,-4.697,30.626)
C2: (-9.274,-10.774,27.610)
C1': (-7.001,-10.081,28.268)
C3': (-5.834,-8.240,27.370)
O5': (-6.129,-6.386,29.622)
O4': (-6.424,-9.327,29.322)
C5': (-5.062,-7.320,29.656)
P: (-6.624,-5.702,30.981)
C4': (-5.342,-8.528,28.777)
C2': (-6.321,-9.631,26.977)
O2': (-5.267,-10.510,26.633)
N1: (-8.466,-9.832,28.209)
O4: (-12.421,-9.163,28.008)
O2: (-8.844,-11.812,27.136)
C6: (-8.987,-8.665,28.730)
C5: (-10.294,-8.376,28.700)
O3': (-4.785,-7.794,26.527)
OP1: (-9.082,-2.866,34.883)
OP2: (-11.610,-2.747,35.262)
C3': (-8.766,-7.011,31.820)
C1': (-10.588,-8.220,32.777)
C5': (-9.591,-4.799,32.807)
O4': (-10.510,-6.961,33.423)
C8: (-12.298,-7.205,31.190)
O2': (-8.386,-9.180,32.900)
C6: (-14.508,-9.806,30.312)
C5: (-13.546,-8.870,30.753)
C4: (-12.572,-9.332,31.621)
P: (-10.396,-3.541,34.977)
C4': (-9.293,-6.270,33.042)
C2': (-9.252,-8.439,32.066)
C2: (-13.407,-11.375,31.608)
N1: (-14.405,-11.073,30.768)
N3: (-12.448,-10.585,32.090)
N6: (-15.505,-9.503,29.473)
N7: (-13.362,-7.522,30.487)
N9: (-11.765,-8.247,31.900)
O5': (-10.664,-4.350,33.623)
O3': (-7.338,-6.918,31.750)
Image (generated by PyMOL):
PyMOL image
show in jmol