Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1116:A1115
Extra
PDB:
ATOM 1 O3' A A1115 -142.388 65.275 9.364 1.00 35.88 O
ATOM 2 P U A1116 -143.903 65.704 9.057 1.00 43.03 P
ATOM 3 OP1 U A1116 -144.778 64.742 9.783 1.00 43.03 O
ATOM 4 OP2 U A1116 -144.035 65.824 7.583 1.00 43.03 O
ATOM 5 O5' U A1116 -144.000 67.152 9.718 1.00 43.03 O
ATOM 6 C5' U A1116 -143.106 67.534 10.756 1.00 43.03 C
ATOM 7 C4' U A1116 -142.648 68.969 10.615 1.00 43.03 C
ATOM 8 O4' U A1116 -141.387 69.026 9.893 1.00 43.03 O
ATOM 9 C3' U A1116 -143.548 69.898 9.817 1.00 43.03 C
ATOM 10 O3' U A1116 -144.679 70.337 10.527 1.00 43.03 O
ATOM 11 C2' U A1116 -142.590 71.006 9.444 1.00 43.03 C
ATOM 12 O2' U A1116 -142.269 71.805 10.579 1.00 43.03 O
ATOM 13 C1' U A1116 -141.374 70.177 9.071 1.00 43.03 C
ATOM 14 N1 U A1116 -141.441 69.733 7.682 1.00 42.85 N
ATOM 15 C2 U A1116 -140.918 70.563 6.724 1.00 42.85 C
ATOM 16 O2 U A1116 -140.419 71.641 6.999 1.00 42.85 O
ATOM 17 N3 U A1116 -140.996 70.084 5.442 1.00 42.85 N
ATOM 18 C4 U A1116 -141.532 68.887 5.038 1.00 42.85 C
ATOM 19 O4 U A1116 -141.526 68.611 3.841 1.00 42.85 O
ATOM 20 C5 U A1116 -142.061 68.086 6.104 1.00 42.85 C
ATOM 21 C6 U A1116 -142.004 68.530 7.364 1.00 42.85 C
ATOM 22 P C A1117 -146.061 70.492 9.750 1.00 47.95 P
ATOM 23 OP1 C A1117 -147.122 70.590 10.772 1.00 47.95 O
ATOM 24 OP2 C A1117 -146.128 69.389 8.759 1.00 47.95 O
ATOM 25 O5' C A1117 -145.880 71.891 8.989 1.00 47.95 O
TER
ATOM 1 O3' U B1114 -143.116 60.439 5.633 1.00 32.71 O
ATOM 2 P A B1115 -143.952 61.796 5.825 1.00 35.88 P
ATOM 3 OP1 A B1115 -145.085 61.480 6.715 1.00 35.88 O
ATOM 4 OP2 A B1115 -144.231 62.343 4.469 1.00 35.88 O
ATOM 5 O5' A B1115 -142.929 62.728 6.587 1.00 35.88 O
ATOM 6 C5' A B1115 -142.623 62.469 7.938 1.00 35.88 C
ATOM 7 C4' A B1115 -141.440 63.266 8.398 1.00 35.88 C
ATOM 8 O4' A B1115 -140.292 62.998 7.558 1.00 35.88 O
ATOM 9 C3' A B1115 -141.586 64.763 8.328 1.00 35.88 C
ATOM 10 O3' A B1115 -142.388 65.275 9.364 1.00 35.88 O
ATOM 11 C2' A B1115 -140.137 65.232 8.373 1.00 35.88 C
ATOM 12 O2' A B1115 -139.648 65.264 9.710 1.00 35.88 O
ATOM 13 C1' A B1115 -139.427 64.108 7.596 1.00 35.88 C
ATOM 14 N9 A B1115 -139.115 64.508 6.221 1.00 36.07 N
ATOM 15 C8 A B1115 -139.896 64.425 5.099 1.00 36.07 C
ATOM 16 N7 A B1115 -139.293 64.903 4.030 1.00 36.07 N
ATOM 17 C5 A B1115 -138.046 65.326 4.493 1.00 36.07 C
ATOM 18 C6 A B1115 -136.935 65.921 3.866 1.00 36.07 C
ATOM 19 N6 A B1115 -136.869 66.232 2.564 1.00 36.07 N
ATOM 20 N1 A B1115 -135.863 66.195 4.646 1.00 36.07 N
ATOM 21 C2 A B1115 -135.893 65.901 5.952 1.00 36.07 C
ATOM 22 N3 A B1115 -136.875 65.346 6.648 1.00 36.07 N
ATOM 23 C4 A B1115 -137.928 65.082 5.848 1.00 36.07 C
ATOM 24 P U B1116 -143.903 65.704 9.057 1.00 43.03 P
ATOM 25 OP1 U B1116 -144.778 64.742 9.783 1.00 43.03 O
ATOM 26 OP2 U B1116 -144.035 65.824 7.583 1.00 43.03 O
ATOM 27 O5' U B1116 -144.000 67.152 9.718 1.00 43.03 O
TER
ATOM 2 P U A1116 -143.903 65.704 9.057 1.00 43.03 P
ATOM 3 OP1 U A1116 -144.778 64.742 9.783 1.00 43.03 O
ATOM 4 OP2 U A1116 -144.035 65.824 7.583 1.00 43.03 O
ATOM 5 O5' U A1116 -144.000 67.152 9.718 1.00 43.03 O
ATOM 6 C5' U A1116 -143.106 67.534 10.756 1.00 43.03 C
ATOM 7 C4' U A1116 -142.648 68.969 10.615 1.00 43.03 C
ATOM 8 O4' U A1116 -141.387 69.026 9.893 1.00 43.03 O
ATOM 9 C3' U A1116 -143.548 69.898 9.817 1.00 43.03 C
ATOM 10 O3' U A1116 -144.679 70.337 10.527 1.00 43.03 O
ATOM 11 C2' U A1116 -142.590 71.006 9.444 1.00 43.03 C
ATOM 12 O2' U A1116 -142.269 71.805 10.579 1.00 43.03 O
ATOM 13 C1' U A1116 -141.374 70.177 9.071 1.00 43.03 C
ATOM 14 N1 U A1116 -141.441 69.733 7.682 1.00 42.85 N
ATOM 15 C2 U A1116 -140.918 70.563 6.724 1.00 42.85 C
ATOM 16 O2 U A1116 -140.419 71.641 6.999 1.00 42.85 O
ATOM 17 N3 U A1116 -140.996 70.084 5.442 1.00 42.85 N
ATOM 18 C4 U A1116 -141.532 68.887 5.038 1.00 42.85 C
ATOM 19 O4 U A1116 -141.526 68.611 3.841 1.00 42.85 O
ATOM 20 C5 U A1116 -142.061 68.086 6.104 1.00 42.85 C
ATOM 21 C6 U A1116 -142.004 68.530 7.364 1.00 42.85 C
ATOM 22 P C A1117 -146.061 70.492 9.750 1.00 47.95 P
ATOM 23 OP1 C A1117 -147.122 70.590 10.772 1.00 47.95 O
ATOM 24 OP2 C A1117 -146.128 69.389 8.759 1.00 47.95 O
ATOM 25 O5' C A1117 -145.880 71.891 8.989 1.00 47.95 O
TER
ATOM 1 O3' U B1114 -143.116 60.439 5.633 1.00 32.71 O
ATOM 2 P A B1115 -143.952 61.796 5.825 1.00 35.88 P
ATOM 3 OP1 A B1115 -145.085 61.480 6.715 1.00 35.88 O
ATOM 4 OP2 A B1115 -144.231 62.343 4.469 1.00 35.88 O
ATOM 5 O5' A B1115 -142.929 62.728 6.587 1.00 35.88 O
ATOM 6 C5' A B1115 -142.623 62.469 7.938 1.00 35.88 C
ATOM 7 C4' A B1115 -141.440 63.266 8.398 1.00 35.88 C
ATOM 8 O4' A B1115 -140.292 62.998 7.558 1.00 35.88 O
ATOM 9 C3' A B1115 -141.586 64.763 8.328 1.00 35.88 C
ATOM 10 O3' A B1115 -142.388 65.275 9.364 1.00 35.88 O
ATOM 11 C2' A B1115 -140.137 65.232 8.373 1.00 35.88 C
ATOM 12 O2' A B1115 -139.648 65.264 9.710 1.00 35.88 O
ATOM 13 C1' A B1115 -139.427 64.108 7.596 1.00 35.88 C
ATOM 14 N9 A B1115 -139.115 64.508 6.221 1.00 36.07 N
ATOM 15 C8 A B1115 -139.896 64.425 5.099 1.00 36.07 C
ATOM 16 N7 A B1115 -139.293 64.903 4.030 1.00 36.07 N
ATOM 17 C5 A B1115 -138.046 65.326 4.493 1.00 36.07 C
ATOM 18 C6 A B1115 -136.935 65.921 3.866 1.00 36.07 C
ATOM 19 N6 A B1115 -136.869 66.232 2.564 1.00 36.07 N
ATOM 20 N1 A B1115 -135.863 66.195 4.646 1.00 36.07 N
ATOM 21 C2 A B1115 -135.893 65.901 5.952 1.00 36.07 C
ATOM 22 N3 A B1115 -136.875 65.346 6.648 1.00 36.07 N
ATOM 23 C4 A B1115 -137.928 65.082 5.848 1.00 36.07 C
ATOM 24 P U B1116 -143.903 65.704 9.057 1.00 43.03 P
ATOM 25 OP1 U B1116 -144.778 64.742 9.783 1.00 43.03 O
ATOM 26 OP2 U B1116 -144.035 65.824 7.583 1.00 43.03 O
ATOM 27 O5' U B1116 -144.000 67.152 9.718 1.00 43.03 O
TER
Atoms:
C4: (-141.532,68.887,5.038)
N3: (-140.996,70.084,5.442)
OP1: (-144.778,64.742,9.783)
OP2: (-144.035,65.824,7.583)
C2: (-140.918,70.563,6.724)
C1': (-141.374,70.177,9.071)
C3': (-143.548,69.898,9.817)
O5': (-144.000,67.152,9.718)
O4': (-141.387,69.026,9.893)
C5': (-143.106,67.534,10.756)
P: (-143.903,65.704,9.057)
C4': (-142.648,68.969,10.615)
C2': (-142.590,71.006,9.444)
O2': (-142.269,71.805,10.579)
N1: (-141.441,69.733,7.682)
O4: (-141.526,68.611,3.841)
O2: (-140.419,71.641,6.999)
C6: (-142.004,68.530,7.364)
C5: (-142.061,68.086,6.104)
O3': (-144.679,70.337,10.527)
N3: (-140.996,70.084,5.442)
OP1: (-144.778,64.742,9.783)
OP2: (-144.035,65.824,7.583)
C2: (-140.918,70.563,6.724)
C1': (-141.374,70.177,9.071)
C3': (-143.548,69.898,9.817)
O5': (-144.000,67.152,9.718)
O4': (-141.387,69.026,9.893)
C5': (-143.106,67.534,10.756)
P: (-143.903,65.704,9.057)
C4': (-142.648,68.969,10.615)
C2': (-142.590,71.006,9.444)
O2': (-142.269,71.805,10.579)
N1: (-141.441,69.733,7.682)
O4: (-141.526,68.611,3.841)
O2: (-140.419,71.641,6.999)
C6: (-142.004,68.530,7.364)
C5: (-142.061,68.086,6.104)
O3': (-144.679,70.337,10.527)
OP1: (-145.085,61.480,6.715)
OP2: (-144.231,62.343,4.469)
C3': (-141.586,64.763,8.328)
C1': (-139.427,64.108,7.596)
C5': (-142.623,62.469,7.938)
O4': (-140.292,62.998,7.558)
C8: (-139.896,64.425,5.099)
O2': (-139.648,65.264,9.710)
C6: (-136.935,65.921,3.866)
C5: (-138.046,65.326,4.493)
C4: (-137.928,65.082,5.848)
P: (-143.952,61.796,5.825)
C4': (-141.440,63.266,8.398)
C2': (-140.137,65.232,8.373)
C2: (-135.893,65.901,5.952)
N1: (-135.863,66.195,4.646)
N3: (-136.875,65.346,6.648)
N6: (-136.869,66.232,2.564)
N7: (-139.293,64.903,4.030)
N9: (-139.115,64.508,6.221)
O5': (-142.929,62.728,6.587)
O3': (-142.388,65.275,9.364)
OP2: (-144.231,62.343,4.469)
C3': (-141.586,64.763,8.328)
C1': (-139.427,64.108,7.596)
C5': (-142.623,62.469,7.938)
O4': (-140.292,62.998,7.558)
C8: (-139.896,64.425,5.099)
O2': (-139.648,65.264,9.710)
C6: (-136.935,65.921,3.866)
C5: (-138.046,65.326,4.493)
C4: (-137.928,65.082,5.848)
P: (-143.952,61.796,5.825)
C4': (-141.440,63.266,8.398)
C2': (-140.137,65.232,8.373)
C2: (-135.893,65.901,5.952)
N1: (-135.863,66.195,4.646)
N3: (-136.875,65.346,6.648)
N6: (-136.869,66.232,2.564)
N7: (-139.293,64.903,4.030)
N9: (-139.115,64.508,6.221)
O5': (-142.929,62.728,6.587)
O3': (-142.388,65.275,9.364)
Image (generated by PyMOL):