Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:X11:X10
Extra
PDB:
ATOM 1 O3' A A 10 -99.805 20.854 3.522 1.00 43.26 O
ATOM 2 P U A 11 -99.065 21.768 2.447 1.00 6.16 P
ATOM 3 OP1 U A 11 -97.687 22.015 2.959 1.00 6.16 O
ATOM 4 OP2 U A 11 -99.971 22.940 2.185 1.00 6.16 O
ATOM 5 O5' U A 11 -98.999 20.839 1.157 1.00 6.16 O
ATOM 6 C5' U A 11 -98.125 19.738 1.115 1.00 6.16 C
ATOM 7 C4' U A 11 -98.716 18.596 0.349 1.00 6.16 C
ATOM 8 O4' U A 11 -99.761 17.966 1.120 1.00 6.16 O
ATOM 9 C3' U A 11 -99.408 18.948 -0.943 1.00 6.16 C
ATOM 10 O3' U A 11 -98.514 19.202 -1.997 1.00 6.16 O
ATOM 11 C2' U A 11 -100.257 17.723 -1.155 1.00 6.16 C
ATOM 12 O2' U A 11 -99.443 16.610 -1.498 1.00 6.16 O
ATOM 13 C1' U A 11 -100.768 17.508 0.254 1.00 6.16 C
ATOM 14 N1 U A 11 -101.998 18.280 0.511 1.00 6.42 N
ATOM 15 C2 U A 11 -103.180 17.890 -0.097 1.00 6.42 C
ATOM 16 O2 U A 11 -103.306 16.939 -0.861 1.00 6.42 O
ATOM 17 N3 U A 11 -104.260 18.667 0.211 1.00 6.42 N
ATOM 18 C4 U A 11 -104.306 19.749 1.035 1.00 6.42 C
ATOM 19 O4 U A 11 -105.380 20.318 1.192 1.00 6.42 O
ATOM 20 C5 U A 11 -103.070 20.087 1.637 1.00 6.42 C
ATOM 21 C6 U A 11 -101.991 19.357 1.349 1.00 6.42 C
ATOM 22 P U A 12 -98.868 20.310 -3.080 1.00 6.94 P
ATOM 23 OP1 U A 12 -97.625 20.639 -3.781 1.00 6.94 O
ATOM 24 OP2 U A 12 -99.614 21.391 -2.392 1.00 6.94 O
ATOM 25 O5' U A 12 -99.836 19.549 -4.044 1.00 6.94 O
TER
ATOM 1 O3' A B 9 -95.311 22.148 7.836 1.00 83.42 O
ATOM 2 P A B 10 -95.993 22.836 6.555 1.00 43.26 P
ATOM 3 OP1 A B 10 -95.124 22.506 5.380 1.00 43.26 O
ATOM 4 OP2 A B 10 -96.230 24.271 6.904 1.00 43.25 O
ATOM 5 O5' A B 10 -97.398 22.073 6.437 1.00 43.26 O
ATOM 6 C5' A B 10 -97.494 20.778 5.851 1.00 43.26 C
ATOM 7 C4' A B 10 -98.931 20.338 5.723 1.00 43.26 C
ATOM 8 O4' A B 10 -99.544 20.324 7.028 1.00 43.26 O
ATOM 9 C3' A B 10 -99.818 21.235 4.873 1.00 43.26 C
ATOM 10 O3' A B 10 -99.805 20.854 3.522 1.00 43.26 O
ATOM 11 C2' A B 10 -101.191 21.115 5.510 1.00 43.26 C
ATOM 12 O2' A B 10 -101.896 20.009 4.986 1.00 43.26 O
ATOM 13 C1' A B 10 -100.854 20.832 6.967 1.00 43.26 C
ATOM 14 N9 A B 10 -100.912 22.039 7.800 1.00 44.05 N
ATOM 15 C8 A B 10 -99.984 23.053 7.857 1.00 44.05 C
ATOM 16 N7 A B 10 -100.295 23.984 8.724 1.00 44.05 N
ATOM 17 C5 A B 10 -101.496 23.538 9.269 1.00 44.05 C
ATOM 18 C6 A B 10 -102.340 24.078 10.240 1.00 44.05 C
ATOM 19 N6 A B 10 -102.050 25.228 10.839 1.00 44.05 N
ATOM 20 N1 A B 10 -103.469 23.408 10.574 1.00 44.05 N
ATOM 21 C2 A B 10 -103.723 22.251 9.958 1.00 44.05 C
ATOM 22 N3 A B 10 -103.002 21.630 9.023 1.00 44.05 N
ATOM 23 C4 A B 10 -101.890 22.335 8.722 1.00 44.05 C
ATOM 24 P U B 11 -99.065 21.768 2.447 1.00 6.16 P
ATOM 25 OP1 U B 11 -97.687 22.015 2.959 1.00 6.16 O
ATOM 26 OP2 U B 11 -99.971 22.940 2.185 1.00 6.16 O
ATOM 27 O5' U B 11 -98.999 20.839 1.157 1.00 6.16 O
TER
ATOM 2 P U A 11 -99.065 21.768 2.447 1.00 6.16 P
ATOM 3 OP1 U A 11 -97.687 22.015 2.959 1.00 6.16 O
ATOM 4 OP2 U A 11 -99.971 22.940 2.185 1.00 6.16 O
ATOM 5 O5' U A 11 -98.999 20.839 1.157 1.00 6.16 O
ATOM 6 C5' U A 11 -98.125 19.738 1.115 1.00 6.16 C
ATOM 7 C4' U A 11 -98.716 18.596 0.349 1.00 6.16 C
ATOM 8 O4' U A 11 -99.761 17.966 1.120 1.00 6.16 O
ATOM 9 C3' U A 11 -99.408 18.948 -0.943 1.00 6.16 C
ATOM 10 O3' U A 11 -98.514 19.202 -1.997 1.00 6.16 O
ATOM 11 C2' U A 11 -100.257 17.723 -1.155 1.00 6.16 C
ATOM 12 O2' U A 11 -99.443 16.610 -1.498 1.00 6.16 O
ATOM 13 C1' U A 11 -100.768 17.508 0.254 1.00 6.16 C
ATOM 14 N1 U A 11 -101.998 18.280 0.511 1.00 6.42 N
ATOM 15 C2 U A 11 -103.180 17.890 -0.097 1.00 6.42 C
ATOM 16 O2 U A 11 -103.306 16.939 -0.861 1.00 6.42 O
ATOM 17 N3 U A 11 -104.260 18.667 0.211 1.00 6.42 N
ATOM 18 C4 U A 11 -104.306 19.749 1.035 1.00 6.42 C
ATOM 19 O4 U A 11 -105.380 20.318 1.192 1.00 6.42 O
ATOM 20 C5 U A 11 -103.070 20.087 1.637 1.00 6.42 C
ATOM 21 C6 U A 11 -101.991 19.357 1.349 1.00 6.42 C
ATOM 22 P U A 12 -98.868 20.310 -3.080 1.00 6.94 P
ATOM 23 OP1 U A 12 -97.625 20.639 -3.781 1.00 6.94 O
ATOM 24 OP2 U A 12 -99.614 21.391 -2.392 1.00 6.94 O
ATOM 25 O5' U A 12 -99.836 19.549 -4.044 1.00 6.94 O
TER
ATOM 1 O3' A B 9 -95.311 22.148 7.836 1.00 83.42 O
ATOM 2 P A B 10 -95.993 22.836 6.555 1.00 43.26 P
ATOM 3 OP1 A B 10 -95.124 22.506 5.380 1.00 43.26 O
ATOM 4 OP2 A B 10 -96.230 24.271 6.904 1.00 43.25 O
ATOM 5 O5' A B 10 -97.398 22.073 6.437 1.00 43.26 O
ATOM 6 C5' A B 10 -97.494 20.778 5.851 1.00 43.26 C
ATOM 7 C4' A B 10 -98.931 20.338 5.723 1.00 43.26 C
ATOM 8 O4' A B 10 -99.544 20.324 7.028 1.00 43.26 O
ATOM 9 C3' A B 10 -99.818 21.235 4.873 1.00 43.26 C
ATOM 10 O3' A B 10 -99.805 20.854 3.522 1.00 43.26 O
ATOM 11 C2' A B 10 -101.191 21.115 5.510 1.00 43.26 C
ATOM 12 O2' A B 10 -101.896 20.009 4.986 1.00 43.26 O
ATOM 13 C1' A B 10 -100.854 20.832 6.967 1.00 43.26 C
ATOM 14 N9 A B 10 -100.912 22.039 7.800 1.00 44.05 N
ATOM 15 C8 A B 10 -99.984 23.053 7.857 1.00 44.05 C
ATOM 16 N7 A B 10 -100.295 23.984 8.724 1.00 44.05 N
ATOM 17 C5 A B 10 -101.496 23.538 9.269 1.00 44.05 C
ATOM 18 C6 A B 10 -102.340 24.078 10.240 1.00 44.05 C
ATOM 19 N6 A B 10 -102.050 25.228 10.839 1.00 44.05 N
ATOM 20 N1 A B 10 -103.469 23.408 10.574 1.00 44.05 N
ATOM 21 C2 A B 10 -103.723 22.251 9.958 1.00 44.05 C
ATOM 22 N3 A B 10 -103.002 21.630 9.023 1.00 44.05 N
ATOM 23 C4 A B 10 -101.890 22.335 8.722 1.00 44.05 C
ATOM 24 P U B 11 -99.065 21.768 2.447 1.00 6.16 P
ATOM 25 OP1 U B 11 -97.687 22.015 2.959 1.00 6.16 O
ATOM 26 OP2 U B 11 -99.971 22.940 2.185 1.00 6.16 O
ATOM 27 O5' U B 11 -98.999 20.839 1.157 1.00 6.16 O
TER
Atoms:
C4: (-104.306,19.749,1.035)
N3: (-104.260,18.667,0.211)
OP1: (-97.687,22.015,2.959)
OP2: (-99.971,22.940,2.185)
C2: (-103.180,17.890,-0.097)
C1': (-100.768,17.508,0.254)
C3': (-99.408,18.948,-0.943)
O5': (-98.999,20.839,1.157)
O4': (-99.761,17.966,1.120)
C5': (-98.125,19.738,1.115)
P: (-99.065,21.768,2.447)
C4': (-98.716,18.596,0.349)
C2': (-100.257,17.723,-1.155)
O2': (-99.443,16.610,-1.498)
N1: (-101.998,18.280,0.511)
O4: (-105.380,20.318,1.192)
O2: (-103.306,16.939,-0.861)
C6: (-101.991,19.357,1.349)
C5: (-103.070,20.087,1.637)
O3': (-98.514,19.202,-1.997)
N3: (-104.260,18.667,0.211)
OP1: (-97.687,22.015,2.959)
OP2: (-99.971,22.940,2.185)
C2: (-103.180,17.890,-0.097)
C1': (-100.768,17.508,0.254)
C3': (-99.408,18.948,-0.943)
O5': (-98.999,20.839,1.157)
O4': (-99.761,17.966,1.120)
C5': (-98.125,19.738,1.115)
P: (-99.065,21.768,2.447)
C4': (-98.716,18.596,0.349)
C2': (-100.257,17.723,-1.155)
O2': (-99.443,16.610,-1.498)
N1: (-101.998,18.280,0.511)
O4: (-105.380,20.318,1.192)
O2: (-103.306,16.939,-0.861)
C6: (-101.991,19.357,1.349)
C5: (-103.070,20.087,1.637)
O3': (-98.514,19.202,-1.997)
OP1: (-95.124,22.506,5.380)
OP2: (-96.230,24.271,6.904)
C3': (-99.818,21.235,4.873)
C1': (-100.854,20.832,6.967)
C5': (-97.494,20.778,5.851)
O4': (-99.544,20.324,7.028)
C8: (-99.984,23.053,7.857)
O2': (-101.896,20.009,4.986)
C6: (-102.340,24.078,10.240)
C5: (-101.496,23.538,9.269)
C4: (-101.890,22.335,8.722)
P: (-95.993,22.836,6.555)
C4': (-98.931,20.338,5.723)
C2': (-101.191,21.115,5.510)
C2: (-103.723,22.251,9.958)
N1: (-103.469,23.408,10.574)
N3: (-103.002,21.630,9.023)
N6: (-102.050,25.228,10.839)
N7: (-100.295,23.984,8.724)
N9: (-100.912,22.039,7.800)
O5': (-97.398,22.073,6.437)
O3': (-99.805,20.854,3.522)
OP2: (-96.230,24.271,6.904)
C3': (-99.818,21.235,4.873)
C1': (-100.854,20.832,6.967)
C5': (-97.494,20.778,5.851)
O4': (-99.544,20.324,7.028)
C8: (-99.984,23.053,7.857)
O2': (-101.896,20.009,4.986)
C6: (-102.340,24.078,10.240)
C5: (-101.496,23.538,9.269)
C4: (-101.890,22.335,8.722)
P: (-95.993,22.836,6.555)
C4': (-98.931,20.338,5.723)
C2': (-101.191,21.115,5.510)
C2: (-103.723,22.251,9.958)
N1: (-103.469,23.408,10.574)
N3: (-103.002,21.630,9.023)
N6: (-102.050,25.228,10.839)
N7: (-100.295,23.984,8.724)
N9: (-100.912,22.039,7.800)
O5': (-97.398,22.073,6.437)
O3': (-99.805,20.854,3.522)
Image (generated by PyMOL):