ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8O:A396:A395

Extra

PDB:
ATOM 1 O3' A A 395 -41.266 42.753 96.558 1.00 7.42 O
ATOM 2 P U A 396 -41.564 44.263 97.043 1.00 10.79 P
ATOM 3 OP1 U A 396 -40.743 44.501 98.269 1.00 10.79 O
ATOM 4 OP2 U A 396 -43.062 44.420 97.110 1.00 10.79 O
ATOM 5 O5' U A 396 -40.985 45.137 95.860 1.00 10.79 O
ATOM 6 C5' U A 396 -40.294 46.334 96.139 1.00 10.79 C
ATOM 7 C4' U A 396 -38.830 46.221 95.811 1.00 10.79 C
ATOM 8 O4' U A 396 -38.176 45.325 96.725 1.00 10.79 O
ATOM 9 C3' U A 396 -38.483 45.633 94.458 1.00 10.79 C
ATOM 10 O3' U A 396 -38.697 46.519 93.390 1.00 10.79 O
ATOM 11 C2' U A 396 -37.031 45.262 94.641 1.00 10.79 C
ATOM 12 O2' U A 396 -36.196 46.400 94.496 1.00 10.79 O
ATOM 13 C1' U A 396 -37.013 44.830 96.103 1.00 10.79 C
ATOM 14 N1 U A 396 -36.964 43.381 96.255 1.00 10.80 N
ATOM 15 C2 U A 396 -35.766 42.803 95.879 1.00 10.80 C
ATOM 16 O2 U A 396 -34.841 43.447 95.413 1.00 10.80 O
ATOM 17 N3 U A 396 -35.689 41.448 96.058 1.00 10.80 N
ATOM 18 C4 U A 396 -36.667 40.648 96.604 1.00 10.80 C
ATOM 19 O4 U A 396 -36.429 39.447 96.719 1.00 10.80 O
ATOM 20 C5 U A 396 -37.881 41.322 96.978 1.00 10.80 C
ATOM 21 C6 U A 396 -37.985 42.649 96.792 1.00 10.80 C
ATOM 22 P G A 397 -39.045 45.933 91.962 1.00 0.95 P
ATOM 23 OP1 G A 397 -39.589 47.034 91.148 1.00 0.95 O
ATOM 24 OP2 G A 397 -39.875 44.749 92.180 1.00 0.95 O
ATOM 25 O5' G A 397 -37.628 45.521 91.417 1.00 0.95 O
TER

ATOM 1 O3' C B 394 -43.733 40.818 99.407 1.00 12.48 O
ATOM 2 P A B 395 -44.589 39.953 98.357 1.00 7.42 P
ATOM 3 OP1 A B 395 -45.970 40.471 98.372 1.00 7.42 O
ATOM 4 OP2 A B 395 -44.357 38.522 98.669 1.00 7.42 O
ATOM 5 O5' A B 395 -43.894 40.297 96.996 1.00 7.42 O
ATOM 6 C5' A B 395 -42.575 39.869 96.769 1.00 7.42 C
ATOM 7 C4' A B 395 -41.963 40.612 95.637 1.00 7.42 C
ATOM 8 O4' A B 395 -42.593 40.221 94.404 1.00 7.42 O
ATOM 9 C3' A B 395 -42.133 42.114 95.645 1.00 7.42 C
ATOM 10 O3' A B 395 -41.266 42.753 96.558 1.00 7.42 O
ATOM 11 C2' A B 395 -41.826 42.458 94.205 1.00 7.42 C
ATOM 12 O2' A B 395 -40.416 42.465 94.013 1.00 7.42 O
ATOM 13 C1' A B 395 -42.406 41.244 93.464 1.00 7.42 C
ATOM 14 N9 A B 395 -43.680 41.512 92.772 1.00 7.02 N
ATOM 15 C8 A B 395 -43.941 40.951 91.553 1.00 7.02 C
ATOM 16 N7 A B 395 -45.106 41.252 91.059 1.00 7.02 N
ATOM 17 C5 A B 395 -45.672 42.079 92.024 1.00 7.02 C
ATOM 18 C6 A B 395 -46.929 42.739 92.072 1.00 7.02 C
ATOM 19 N6 A B 395 -47.863 42.674 91.130 1.00 7.02 N
ATOM 20 N1 A B 395 -47.210 43.470 93.146 1.00 7.02 N
ATOM 21 C2 A B 395 -46.246 43.503 94.076 1.00 7.02 C
ATOM 22 N3 A B 395 -45.027 42.936 94.159 1.00 7.02 N
ATOM 23 C4 A B 395 -44.794 42.227 93.083 1.00 7.02 C
ATOM 24 P U B 396 -41.564 44.263 97.043 1.00 10.79 P
ATOM 25 OP1 U B 396 -40.743 44.501 98.269 1.00 10.79 O
ATOM 26 OP2 U B 396 -43.062 44.420 97.110 1.00 10.79 O
ATOM 27 O5' U B 396 -40.985 45.137 95.860 1.00 10.79 O
TER

Atoms:
C4: (-36.667,40.648,96.604)
N3: (-35.689,41.448,96.058)
OP1: (-40.743,44.501,98.269)
OP2: (-43.062,44.420,97.110)
C2: (-35.766,42.803,95.879)
C1': (-37.013,44.830,96.103)
C3': (-38.483,45.633,94.458)
O5': (-40.985,45.137,95.860)
O4': (-38.176,45.325,96.725)
C5': (-40.294,46.334,96.139)
P: (-41.564,44.263,97.043)
C4': (-38.830,46.221,95.811)
C2': (-37.031,45.262,94.641)
O2': (-36.196,46.400,94.496)
N1: (-36.964,43.381,96.255)
O4: (-36.429,39.447,96.719)
O2: (-34.841,43.447,95.413)
C6: (-37.985,42.649,96.792)
C5: (-37.881,41.322,96.978)
O3': (-38.697,46.519,93.390)
OP1: (-45.970,40.471,98.372)
OP2: (-44.357,38.522,98.669)
C3': (-42.133,42.114,95.645)
C1': (-42.406,41.244,93.464)
C5': (-42.575,39.869,96.769)
O4': (-42.593,40.221,94.404)
C8: (-43.941,40.951,91.553)
O2': (-40.416,42.465,94.013)
C6: (-46.929,42.739,92.072)
C5: (-45.672,42.079,92.024)
C4: (-44.794,42.227,93.083)
P: (-44.589,39.953,98.357)
C4': (-41.963,40.612,95.637)
C2': (-41.826,42.458,94.205)
C2: (-46.246,43.503,94.076)
N1: (-47.210,43.470,93.146)
N3: (-45.027,42.936,94.159)
N6: (-47.863,42.674,91.130)
N7: (-45.106,41.252,91.059)
N9: (-43.680,41.512,92.772)
O5': (-43.894,40.297,96.996)
O3': (-41.266,42.753,96.558)
Image (generated by PyMOL):
PyMOL image
show in jmol