Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A446:A464
Extra
PDB:
ATOM 1 O3' U A 445 50.091 130.070 53.656 1.00 33.83 O
ATOM 2 P G A 446 50.544 130.068 55.195 1.00 35.59 P
ATOM 3 OP1 G A 446 51.748 129.217 55.196 1.00 33.44 O
ATOM 4 OP2 G A 446 49.391 129.721 56.077 1.00 35.27 O
ATOM 5 O5' G A 446 50.978 131.568 55.490 1.00 34.40 O
ATOM 6 C5' G A 446 50.928 132.086 56.825 1.00 33.46 C
ATOM 7 C4' G A 446 51.097 133.577 56.806 1.00 33.72 C
ATOM 8 O4' G A 446 52.401 133.890 56.251 1.00 34.71 O
ATOM 9 C3' G A 446 50.109 134.331 55.929 1.00 32.97 C
ATOM 10 O3' G A 446 48.921 134.651 56.648 1.00 32.43 O
ATOM 11 C2' G A 446 50.881 135.589 55.562 1.00 33.25 C
ATOM 12 O2' G A 446 50.842 136.512 56.627 1.00 33.59 O
ATOM 13 C1' G A 446 52.315 135.064 55.470 1.00 32.72 C
ATOM 14 N9 G A 446 52.848 134.778 54.144 1.00 31.61 N
ATOM 15 C8 G A 446 53.141 133.539 53.620 1.00 32.22 C
ATOM 16 N7 G A 446 53.722 133.600 52.453 1.00 33.10 N
ATOM 17 C5 G A 446 53.803 134.961 52.181 1.00 31.10 C
ATOM 18 C6 G A 446 54.365 135.638 51.085 1.00 30.07 C
ATOM 19 O6 G A 446 54.987 135.165 50.136 1.00 30.87 O
ATOM 20 N1 G A 446 54.170 137.014 51.175 1.00 30.07 N
ATOM 21 C2 G A 446 53.539 137.657 52.207 1.00 29.98 C
ATOM 22 N2 G A 446 53.388 138.981 52.075 1.00 30.98 N
ATOM 23 N3 G A 446 53.073 137.041 53.279 1.00 30.82 N
ATOM 24 C4 G A 446 53.227 135.699 53.195 1.00 31.69 C
ATOM 25 P A A 447 47.500 134.592 55.904 1.00 30.92 P
ATOM 26 OP1 A A 447 46.469 134.755 56.922 1.00 28.79 O
ATOM 27 OP2 A A 447 47.527 133.373 55.093 1.00 32.81 O
ATOM 28 O5' A A 447 47.496 135.861 54.947 1.00 31.28 O
TER
ATOM 1 O3' G B 463 54.783 136.989 60.577 1.00 30.84 O
ATOM 2 P A B 464 53.725 136.498 59.483 1.00 32.99 P
ATOM 3 OP1 A B 464 52.789 135.564 60.144 1.00 32.79 O
ATOM 4 OP2 A B 464 54.487 136.054 58.294 1.00 32.89 O
ATOM 5 O5' A B 464 52.983 137.853 59.107 1.00 32.09 O
ATOM 6 C5' A B 464 51.593 138.071 59.406 1.00 32.24 C
ATOM 7 C4' A B 464 51.455 138.668 60.777 1.00 32.20 C
ATOM 8 O4' A B 464 52.352 139.786 60.938 1.00 30.96 O
ATOM 9 C3' A B 464 50.081 139.232 61.063 1.00 33.67 C
ATOM 10 O3' A B 464 49.251 138.218 61.543 1.00 34.43 O
ATOM 11 C2' A B 464 50.342 140.261 62.144 1.00 32.86 C
ATOM 12 O2' A B 464 50.364 139.726 63.449 1.00 32.51 O
ATOM 13 C1' A B 464 51.705 140.792 61.707 1.00 31.56 C
ATOM 14 N9 A B 464 51.526 141.956 60.853 1.00 29.71 N
ATOM 15 C8 A B 464 51.965 142.118 59.573 1.00 28.37 C
ATOM 16 N7 A B 464 51.732 143.303 59.085 1.00 28.50 N
ATOM 17 C5 A B 464 51.085 143.963 60.112 1.00 27.84 C
ATOM 18 C6 A B 464 50.639 145.260 60.234 1.00 28.77 C
ATOM 19 N6 A B 464 50.847 146.182 59.300 1.00 30.23 N
ATOM 20 N1 A B 464 49.992 145.603 61.373 1.00 28.84 N
ATOM 21 C2 A B 464 49.859 144.685 62.335 1.00 28.63 C
ATOM 22 N3 A B 464 50.289 143.434 62.353 1.00 28.41 N
ATOM 23 C4 A B 464 50.908 143.133 61.192 1.00 28.90 C
ATOM 24 P A B 465 47.886 137.911 60.795 1.00 35.28 P
ATOM 25 OP1 A B 465 47.480 136.551 61.191 1.00 36.08 O
ATOM 26 OP2 A B 465 48.086 138.235 59.363 1.00 34.52 O
ATOM 27 O5' A B 465 46.864 138.945 61.436 1.00 34.60 O
TER
ATOM 2 P G A 446 50.544 130.068 55.195 1.00 35.59 P
ATOM 3 OP1 G A 446 51.748 129.217 55.196 1.00 33.44 O
ATOM 4 OP2 G A 446 49.391 129.721 56.077 1.00 35.27 O
ATOM 5 O5' G A 446 50.978 131.568 55.490 1.00 34.40 O
ATOM 6 C5' G A 446 50.928 132.086 56.825 1.00 33.46 C
ATOM 7 C4' G A 446 51.097 133.577 56.806 1.00 33.72 C
ATOM 8 O4' G A 446 52.401 133.890 56.251 1.00 34.71 O
ATOM 9 C3' G A 446 50.109 134.331 55.929 1.00 32.97 C
ATOM 10 O3' G A 446 48.921 134.651 56.648 1.00 32.43 O
ATOM 11 C2' G A 446 50.881 135.589 55.562 1.00 33.25 C
ATOM 12 O2' G A 446 50.842 136.512 56.627 1.00 33.59 O
ATOM 13 C1' G A 446 52.315 135.064 55.470 1.00 32.72 C
ATOM 14 N9 G A 446 52.848 134.778 54.144 1.00 31.61 N
ATOM 15 C8 G A 446 53.141 133.539 53.620 1.00 32.22 C
ATOM 16 N7 G A 446 53.722 133.600 52.453 1.00 33.10 N
ATOM 17 C5 G A 446 53.803 134.961 52.181 1.00 31.10 C
ATOM 18 C6 G A 446 54.365 135.638 51.085 1.00 30.07 C
ATOM 19 O6 G A 446 54.987 135.165 50.136 1.00 30.87 O
ATOM 20 N1 G A 446 54.170 137.014 51.175 1.00 30.07 N
ATOM 21 C2 G A 446 53.539 137.657 52.207 1.00 29.98 C
ATOM 22 N2 G A 446 53.388 138.981 52.075 1.00 30.98 N
ATOM 23 N3 G A 446 53.073 137.041 53.279 1.00 30.82 N
ATOM 24 C4 G A 446 53.227 135.699 53.195 1.00 31.69 C
ATOM 25 P A A 447 47.500 134.592 55.904 1.00 30.92 P
ATOM 26 OP1 A A 447 46.469 134.755 56.922 1.00 28.79 O
ATOM 27 OP2 A A 447 47.527 133.373 55.093 1.00 32.81 O
ATOM 28 O5' A A 447 47.496 135.861 54.947 1.00 31.28 O
TER
ATOM 1 O3' G B 463 54.783 136.989 60.577 1.00 30.84 O
ATOM 2 P A B 464 53.725 136.498 59.483 1.00 32.99 P
ATOM 3 OP1 A B 464 52.789 135.564 60.144 1.00 32.79 O
ATOM 4 OP2 A B 464 54.487 136.054 58.294 1.00 32.89 O
ATOM 5 O5' A B 464 52.983 137.853 59.107 1.00 32.09 O
ATOM 6 C5' A B 464 51.593 138.071 59.406 1.00 32.24 C
ATOM 7 C4' A B 464 51.455 138.668 60.777 1.00 32.20 C
ATOM 8 O4' A B 464 52.352 139.786 60.938 1.00 30.96 O
ATOM 9 C3' A B 464 50.081 139.232 61.063 1.00 33.67 C
ATOM 10 O3' A B 464 49.251 138.218 61.543 1.00 34.43 O
ATOM 11 C2' A B 464 50.342 140.261 62.144 1.00 32.86 C
ATOM 12 O2' A B 464 50.364 139.726 63.449 1.00 32.51 O
ATOM 13 C1' A B 464 51.705 140.792 61.707 1.00 31.56 C
ATOM 14 N9 A B 464 51.526 141.956 60.853 1.00 29.71 N
ATOM 15 C8 A B 464 51.965 142.118 59.573 1.00 28.37 C
ATOM 16 N7 A B 464 51.732 143.303 59.085 1.00 28.50 N
ATOM 17 C5 A B 464 51.085 143.963 60.112 1.00 27.84 C
ATOM 18 C6 A B 464 50.639 145.260 60.234 1.00 28.77 C
ATOM 19 N6 A B 464 50.847 146.182 59.300 1.00 30.23 N
ATOM 20 N1 A B 464 49.992 145.603 61.373 1.00 28.84 N
ATOM 21 C2 A B 464 49.859 144.685 62.335 1.00 28.63 C
ATOM 22 N3 A B 464 50.289 143.434 62.353 1.00 28.41 N
ATOM 23 C4 A B 464 50.908 143.133 61.192 1.00 28.90 C
ATOM 24 P A B 465 47.886 137.911 60.795 1.00 35.28 P
ATOM 25 OP1 A B 465 47.480 136.551 61.191 1.00 36.08 O
ATOM 26 OP2 A B 465 48.086 138.235 59.363 1.00 34.52 O
ATOM 27 O5' A B 465 46.864 138.945 61.436 1.00 34.60 O
TER
Atoms:
OP1: (51.748,129.217,55.196)
OP2: (49.391,129.721,56.077)
C3': (50.109,134.331,55.929)
C1': (52.315,135.064,55.470)
C5': (50.928,132.086,56.825)
O6: (54.987,135.165,50.136)
O4': (52.401,133.890,56.251)
C8: (53.141,133.539,53.620)
C2: (53.539,137.657,52.207)
C6: (54.365,135.638,51.085)
C5: (53.803,134.961,52.181)
C4: (53.227,135.699,53.195)
P: (50.544,130.068,55.195)
C4': (51.097,133.577,56.806)
C2': (50.881,135.589,55.562)
O2': (50.842,136.512,56.627)
N1: (54.170,137.014,51.175)
N2: (53.388,138.981,52.075)
N3: (53.073,137.041,53.279)
N7: (53.722,133.600,52.453)
N9: (52.848,134.778,54.144)
O5': (50.978,131.568,55.490)
O3': (48.921,134.651,56.648)
OP2: (49.391,129.721,56.077)
C3': (50.109,134.331,55.929)
C1': (52.315,135.064,55.470)
C5': (50.928,132.086,56.825)
O6: (54.987,135.165,50.136)
O4': (52.401,133.890,56.251)
C8: (53.141,133.539,53.620)
C2: (53.539,137.657,52.207)
C6: (54.365,135.638,51.085)
C5: (53.803,134.961,52.181)
C4: (53.227,135.699,53.195)
P: (50.544,130.068,55.195)
C4': (51.097,133.577,56.806)
C2': (50.881,135.589,55.562)
O2': (50.842,136.512,56.627)
N1: (54.170,137.014,51.175)
N2: (53.388,138.981,52.075)
N3: (53.073,137.041,53.279)
N7: (53.722,133.600,52.453)
N9: (52.848,134.778,54.144)
O5': (50.978,131.568,55.490)
O3': (48.921,134.651,56.648)
OP1: (52.789,135.564,60.144)
OP2: (54.487,136.054,58.294)
C3': (50.081,139.232,61.063)
C1': (51.705,140.792,61.707)
C5': (51.593,138.071,59.406)
O4': (52.352,139.786,60.938)
C8: (51.965,142.118,59.573)
O2': (50.364,139.726,63.449)
C6: (50.639,145.260,60.234)
C5: (51.085,143.963,60.112)
C4: (50.908,143.133,61.192)
P: (53.725,136.498,59.483)
C4': (51.455,138.668,60.777)
C2': (50.342,140.261,62.144)
C2: (49.859,144.685,62.335)
N1: (49.992,145.603,61.373)
N3: (50.289,143.434,62.353)
N6: (50.847,146.182,59.300)
N7: (51.732,143.303,59.085)
N9: (51.526,141.956,60.853)
O5': (52.983,137.853,59.107)
O3': (49.251,138.218,61.543)
OP2: (54.487,136.054,58.294)
C3': (50.081,139.232,61.063)
C1': (51.705,140.792,61.707)
C5': (51.593,138.071,59.406)
O4': (52.352,139.786,60.938)
C8: (51.965,142.118,59.573)
O2': (50.364,139.726,63.449)
C6: (50.639,145.260,60.234)
C5: (51.085,143.963,60.112)
C4: (50.908,143.133,61.192)
P: (53.725,136.498,59.483)
C4': (51.455,138.668,60.777)
C2': (50.342,140.261,62.144)
C2: (49.859,144.685,62.335)
N1: (49.992,145.603,61.373)
N3: (50.289,143.434,62.353)
N6: (50.847,146.182,59.300)
N7: (51.732,143.303,59.085)
N9: (51.526,141.956,60.853)
O5': (52.983,137.853,59.107)
O3': (49.251,138.218,61.543)
Image (generated by PyMOL):