Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1054:A1063
Extra
PDB:
ATOM 1 O3' U A1053 -138.749 -46.457 -66.829 1.00108.88 O
ATOM 2 P U A1054 -138.162 -45.953 -68.250 1.00115.00 P
ATOM 3 OP1 U A1054 -138.823 -44.654 -68.549 1.00115.00 O
ATOM 4 OP2 U A1054 -138.328 -47.076 -69.216 1.00115.00 O
ATOM 5 O5' U A1054 -136.603 -45.716 -67.944 1.00115.00 O
ATOM 6 C5' U A1054 -135.952 -44.472 -68.245 1.00115.00 C
ATOM 7 C4' U A1054 -134.927 -44.112 -67.185 1.00115.00 C
ATOM 8 O4' U A1054 -134.028 -43.080 -67.684 1.00115.00 O
ATOM 9 C3' U A1054 -135.508 -43.580 -65.867 1.00115.00 C
ATOM 10 O3' U A1054 -134.924 -44.244 -64.769 1.00115.00 O
ATOM 11 C2' U A1054 -135.097 -42.112 -65.837 1.00115.00 C
ATOM 12 O2' U A1054 -134.901 -41.571 -64.539 1.00115.00 O
ATOM 13 C1' U A1054 -133.812 -42.126 -66.659 1.00115.00 C
ATOM 14 N1 U A1054 -133.495 -40.803 -67.261 1.00115.07 N
ATOM 15 C2 U A1054 -133.873 -40.406 -68.547 1.00115.07 C
ATOM 16 O2 U A1054 -134.448 -41.137 -69.347 1.00115.07 O
ATOM 17 N3 U A1054 -133.508 -39.101 -68.864 1.00115.07 N
ATOM 18 C4 U A1054 -132.853 -38.182 -68.045 1.00115.07 C
ATOM 19 O4 U A1054 -132.596 -37.050 -68.457 1.00115.07 O
ATOM 20 C5 U A1054 -132.530 -38.660 -66.737 1.00115.07 C
ATOM 21 C6 U A1054 -132.870 -39.911 -66.410 1.00115.07 C
ATOM 22 P G A1055 -135.675 -44.211 -63.359 1.00106.37 P
ATOM 23 OP1 G A1055 -134.648 -44.374 -62.305 1.00106.37 O
ATOM 24 OP2 G A1055 -136.775 -45.197 -63.442 1.00106.37 O
ATOM 25 O5' G A1055 -136.271 -42.736 -63.299 1.00106.37 O
TER
ATOM 1 O3' A B1062 -130.734 -39.701 -62.694 1.00142.10 O
ATOM 2 P A B1063 -132.271 -39.186 -62.623 1.00143.24 P
ATOM 3 OP1 A B1063 -132.591 -38.574 -63.940 1.00143.24 O
ATOM 4 OP2 A B1063 -132.403 -38.349 -61.399 1.00143.24 O
ATOM 5 O5' A B1063 -133.094 -40.543 -62.442 1.00143.24 O
ATOM 6 C5' A B1063 -132.586 -41.605 -61.640 1.00143.24 C
ATOM 7 C4' A B1063 -132.255 -42.819 -62.473 1.00143.24 C
ATOM 8 O4' A B1063 -131.895 -42.395 -63.821 1.00143.24 O
ATOM 9 C3' A B1063 -131.089 -43.679 -61.962 1.00143.24 C
ATOM 10 O3' A B1063 -131.392 -45.066 -62.157 1.00143.24 O
ATOM 11 C2' A B1063 -129.936 -43.275 -62.884 1.00143.24 C
ATOM 12 O2' A B1063 -128.938 -44.262 -63.040 1.00143.24 O
ATOM 13 C1' A B1063 -130.673 -43.000 -64.193 1.00143.24 C
ATOM 14 N9 A B1063 -129.959 -42.104 -65.116 1.00140.98 N
ATOM 15 C8 A B1063 -129.260 -40.956 -64.841 1.00140.98 C
ATOM 16 N7 A B1063 -128.719 -40.390 -65.892 1.00140.98 N
ATOM 17 C5 A B1063 -129.081 -41.226 -66.946 1.00140.98 C
ATOM 18 C6 A B1063 -128.822 -41.195 -68.338 1.00140.98 C
ATOM 19 N6 A B1063 -128.107 -40.246 -68.953 1.00140.98 N
ATOM 20 N1 A B1063 -129.332 -42.190 -69.101 1.00140.98 N
ATOM 21 C2 A B1063 -130.052 -43.154 -68.509 1.00140.98 C
ATOM 22 N3 A B1063 -130.359 -43.295 -67.220 1.00140.98 N
ATOM 23 C4 A B1063 -129.838 -42.290 -66.479 1.00140.98 C
ATOM 24 P G B1064 -130.992 -46.169 -61.049 1.00139.86 P
ATOM 25 OP1 G B1064 -129.535 -46.434 -61.193 1.00139.86 O
ATOM 26 OP2 G B1064 -131.942 -47.299 -61.212 1.00139.86 O
ATOM 27 O5' G B1064 -131.271 -45.420 -59.671 1.00139.86 O
TER
ATOM 2 P U A1054 -138.162 -45.953 -68.250 1.00115.00 P
ATOM 3 OP1 U A1054 -138.823 -44.654 -68.549 1.00115.00 O
ATOM 4 OP2 U A1054 -138.328 -47.076 -69.216 1.00115.00 O
ATOM 5 O5' U A1054 -136.603 -45.716 -67.944 1.00115.00 O
ATOM 6 C5' U A1054 -135.952 -44.472 -68.245 1.00115.00 C
ATOM 7 C4' U A1054 -134.927 -44.112 -67.185 1.00115.00 C
ATOM 8 O4' U A1054 -134.028 -43.080 -67.684 1.00115.00 O
ATOM 9 C3' U A1054 -135.508 -43.580 -65.867 1.00115.00 C
ATOM 10 O3' U A1054 -134.924 -44.244 -64.769 1.00115.00 O
ATOM 11 C2' U A1054 -135.097 -42.112 -65.837 1.00115.00 C
ATOM 12 O2' U A1054 -134.901 -41.571 -64.539 1.00115.00 O
ATOM 13 C1' U A1054 -133.812 -42.126 -66.659 1.00115.00 C
ATOM 14 N1 U A1054 -133.495 -40.803 -67.261 1.00115.07 N
ATOM 15 C2 U A1054 -133.873 -40.406 -68.547 1.00115.07 C
ATOM 16 O2 U A1054 -134.448 -41.137 -69.347 1.00115.07 O
ATOM 17 N3 U A1054 -133.508 -39.101 -68.864 1.00115.07 N
ATOM 18 C4 U A1054 -132.853 -38.182 -68.045 1.00115.07 C
ATOM 19 O4 U A1054 -132.596 -37.050 -68.457 1.00115.07 O
ATOM 20 C5 U A1054 -132.530 -38.660 -66.737 1.00115.07 C
ATOM 21 C6 U A1054 -132.870 -39.911 -66.410 1.00115.07 C
ATOM 22 P G A1055 -135.675 -44.211 -63.359 1.00106.37 P
ATOM 23 OP1 G A1055 -134.648 -44.374 -62.305 1.00106.37 O
ATOM 24 OP2 G A1055 -136.775 -45.197 -63.442 1.00106.37 O
ATOM 25 O5' G A1055 -136.271 -42.736 -63.299 1.00106.37 O
TER
ATOM 1 O3' A B1062 -130.734 -39.701 -62.694 1.00142.10 O
ATOM 2 P A B1063 -132.271 -39.186 -62.623 1.00143.24 P
ATOM 3 OP1 A B1063 -132.591 -38.574 -63.940 1.00143.24 O
ATOM 4 OP2 A B1063 -132.403 -38.349 -61.399 1.00143.24 O
ATOM 5 O5' A B1063 -133.094 -40.543 -62.442 1.00143.24 O
ATOM 6 C5' A B1063 -132.586 -41.605 -61.640 1.00143.24 C
ATOM 7 C4' A B1063 -132.255 -42.819 -62.473 1.00143.24 C
ATOM 8 O4' A B1063 -131.895 -42.395 -63.821 1.00143.24 O
ATOM 9 C3' A B1063 -131.089 -43.679 -61.962 1.00143.24 C
ATOM 10 O3' A B1063 -131.392 -45.066 -62.157 1.00143.24 O
ATOM 11 C2' A B1063 -129.936 -43.275 -62.884 1.00143.24 C
ATOM 12 O2' A B1063 -128.938 -44.262 -63.040 1.00143.24 O
ATOM 13 C1' A B1063 -130.673 -43.000 -64.193 1.00143.24 C
ATOM 14 N9 A B1063 -129.959 -42.104 -65.116 1.00140.98 N
ATOM 15 C8 A B1063 -129.260 -40.956 -64.841 1.00140.98 C
ATOM 16 N7 A B1063 -128.719 -40.390 -65.892 1.00140.98 N
ATOM 17 C5 A B1063 -129.081 -41.226 -66.946 1.00140.98 C
ATOM 18 C6 A B1063 -128.822 -41.195 -68.338 1.00140.98 C
ATOM 19 N6 A B1063 -128.107 -40.246 -68.953 1.00140.98 N
ATOM 20 N1 A B1063 -129.332 -42.190 -69.101 1.00140.98 N
ATOM 21 C2 A B1063 -130.052 -43.154 -68.509 1.00140.98 C
ATOM 22 N3 A B1063 -130.359 -43.295 -67.220 1.00140.98 N
ATOM 23 C4 A B1063 -129.838 -42.290 -66.479 1.00140.98 C
ATOM 24 P G B1064 -130.992 -46.169 -61.049 1.00139.86 P
ATOM 25 OP1 G B1064 -129.535 -46.434 -61.193 1.00139.86 O
ATOM 26 OP2 G B1064 -131.942 -47.299 -61.212 1.00139.86 O
ATOM 27 O5' G B1064 -131.271 -45.420 -59.671 1.00139.86 O
TER
Atoms:
C4: (-132.853,-38.182,-68.045)
N3: (-133.508,-39.101,-68.864)
OP1: (-138.823,-44.654,-68.549)
OP2: (-138.328,-47.076,-69.216)
C2: (-133.873,-40.406,-68.547)
C1': (-133.812,-42.126,-66.659)
C3': (-135.508,-43.580,-65.867)
O5': (-136.603,-45.716,-67.944)
O4': (-134.028,-43.080,-67.684)
C5': (-135.952,-44.472,-68.245)
P: (-138.162,-45.953,-68.250)
C4': (-134.927,-44.112,-67.185)
C2': (-135.097,-42.112,-65.837)
O2': (-134.901,-41.571,-64.539)
N1: (-133.495,-40.803,-67.261)
O4: (-132.596,-37.050,-68.457)
O2: (-134.448,-41.137,-69.347)
C6: (-132.870,-39.911,-66.410)
C5: (-132.530,-38.660,-66.737)
O3': (-134.924,-44.244,-64.769)
N3: (-133.508,-39.101,-68.864)
OP1: (-138.823,-44.654,-68.549)
OP2: (-138.328,-47.076,-69.216)
C2: (-133.873,-40.406,-68.547)
C1': (-133.812,-42.126,-66.659)
C3': (-135.508,-43.580,-65.867)
O5': (-136.603,-45.716,-67.944)
O4': (-134.028,-43.080,-67.684)
C5': (-135.952,-44.472,-68.245)
P: (-138.162,-45.953,-68.250)
C4': (-134.927,-44.112,-67.185)
C2': (-135.097,-42.112,-65.837)
O2': (-134.901,-41.571,-64.539)
N1: (-133.495,-40.803,-67.261)
O4: (-132.596,-37.050,-68.457)
O2: (-134.448,-41.137,-69.347)
C6: (-132.870,-39.911,-66.410)
C5: (-132.530,-38.660,-66.737)
O3': (-134.924,-44.244,-64.769)
OP1: (-132.591,-38.574,-63.940)
OP2: (-132.403,-38.349,-61.399)
C3': (-131.089,-43.679,-61.962)
C1': (-130.673,-43.000,-64.193)
C5': (-132.586,-41.605,-61.640)
O4': (-131.895,-42.395,-63.821)
C8: (-129.260,-40.956,-64.841)
O2': (-128.938,-44.262,-63.040)
C6: (-128.822,-41.195,-68.338)
C5: (-129.081,-41.226,-66.946)
C4: (-129.838,-42.290,-66.479)
P: (-132.271,-39.186,-62.623)
C4': (-132.255,-42.819,-62.473)
C2': (-129.936,-43.275,-62.884)
C2: (-130.052,-43.154,-68.509)
N1: (-129.332,-42.190,-69.101)
N3: (-130.359,-43.295,-67.220)
N6: (-128.107,-40.246,-68.953)
N7: (-128.719,-40.390,-65.892)
N9: (-129.959,-42.104,-65.116)
O5': (-133.094,-40.543,-62.442)
O3': (-131.392,-45.066,-62.157)
OP2: (-132.403,-38.349,-61.399)
C3': (-131.089,-43.679,-61.962)
C1': (-130.673,-43.000,-64.193)
C5': (-132.586,-41.605,-61.640)
O4': (-131.895,-42.395,-63.821)
C8: (-129.260,-40.956,-64.841)
O2': (-128.938,-44.262,-63.040)
C6: (-128.822,-41.195,-68.338)
C5: (-129.081,-41.226,-66.946)
C4: (-129.838,-42.290,-66.479)
P: (-132.271,-39.186,-62.623)
C4': (-132.255,-42.819,-62.473)
C2': (-129.936,-43.275,-62.884)
C2: (-130.052,-43.154,-68.509)
N1: (-129.332,-42.190,-69.101)
N3: (-130.359,-43.295,-67.220)
N6: (-128.107,-40.246,-68.953)
N7: (-128.719,-40.390,-65.892)
N9: (-129.959,-42.104,-65.116)
O5': (-133.094,-40.543,-62.442)
O3': (-131.392,-45.066,-62.157)
Image (generated by PyMOL):