Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1322:A1321
Extra
PDB:
ATOM 1 O3' A A1321 -20.579 -79.923 7.004 1.00 0.01 O
ATOM 2 P U A1322 -20.204 -79.840 8.531 1.00 0.01 P
ATOM 3 OP1 U A1322 -19.946 -81.204 8.998 1.00 0.01 O
ATOM 4 OP2 U A1322 -21.248 -79.075 9.189 1.00 0.01 O
ATOM 5 O5' U A1322 -18.849 -79.003 8.470 1.00 0.01 O
ATOM 6 C5' U A1322 -17.707 -79.384 9.236 1.00 0.01 C
ATOM 7 C4' U A1322 -16.423 -79.060 8.521 1.00 0.01 C
ATOM 8 O4' U A1322 -16.288 -79.924 7.357 1.00 0.01 O
ATOM 9 C3' U A1322 -16.317 -77.632 8.005 1.00 0.01 C
ATOM 10 O3' U A1322 -14.992 -77.158 8.167 1.00 0.01 O
ATOM 11 C2' U A1322 -16.608 -77.787 6.530 1.00 0.01 C
ATOM 12 O2' U A1322 -16.052 -76.785 5.708 1.00 0.01 O
ATOM 13 C1' U A1322 -15.984 -79.141 6.243 1.00 0.01 C
ATOM 14 N1 U A1322 -16.524 -79.786 5.033 1.00 0.01 N
ATOM 15 C2 U A1322 -15.672 -80.202 4.047 1.00 0.01 C
ATOM 16 O2 U A1322 -14.487 -80.132 4.170 1.00 0.01 O
ATOM 17 N3 U A1322 -16.255 -80.725 2.940 1.00 0.01 N
ATOM 18 C4 U A1322 -17.612 -80.847 2.700 1.00 0.01 C
ATOM 19 O4 U A1322 -18.056 -81.337 1.656 1.00 0.01 O
ATOM 20 C5 U A1322 -18.438 -80.362 3.750 1.00 0.01 C
ATOM 21 C6 U A1322 -17.878 -79.846 4.846 1.00 0.01 C
ATOM 22 P C A1323 -14.652 -76.115 9.320 1.00 0.01 P
ATOM 23 OP1 C A1323 -13.229 -75.832 9.230 1.00 0.01 O
ATOM 24 OP2 C A1323 -15.180 -76.671 10.580 1.00 0.01 O
ATOM 25 O5' C A1323 -15.481 -74.846 8.888 1.00 0.01 O
TER
ATOM 1 O3' A B1320 -25.705 -81.286 3.962 1.00 0.01 O
ATOM 2 P A B1321 -25.341 -81.406 5.519 1.00 0.01 P
ATOM 3 OP1 A B1321 -24.847 -82.800 5.727 1.00 0.01 O
ATOM 4 OP2 A B1321 -26.500 -80.933 6.297 1.00 0.01 O
ATOM 5 O5' A B1321 -24.164 -80.396 5.655 1.00 0.01 O
ATOM 6 C5' A B1321 -22.919 -80.717 5.110 1.00 0.01 C
ATOM 7 C4' A B1321 -22.018 -79.545 5.142 1.00 0.01 C
ATOM 8 O4' A B1321 -22.698 -78.401 4.624 1.00 0.01 O
ATOM 9 C3' A B1321 -21.582 -79.100 6.497 1.00 0.01 C
ATOM 10 O3' A B1321 -20.579 -79.923 7.004 1.00 0.01 O
ATOM 11 C2' A B1321 -21.131 -77.686 6.227 1.00 0.01 C
ATOM 12 O2' A B1321 -19.836 -77.688 5.647 1.00 0.01 O
ATOM 13 C1' A B1321 -22.134 -77.253 5.158 1.00 0.01 C
ATOM 14 N9 A B1321 -23.220 -76.452 5.682 1.00 0.13 N
ATOM 15 C8 A B1321 -24.437 -76.888 6.116 1.00 0.13 C
ATOM 16 N7 A B1321 -25.233 -75.913 6.490 1.00 0.13 N
ATOM 17 C5 A B1321 -24.481 -74.790 6.241 1.00 0.13 C
ATOM 18 C6 A B1321 -24.764 -73.463 6.409 1.00 0.13 C
ATOM 19 N6 A B1321 -25.906 -73.036 6.871 1.00 0.13 N
ATOM 20 N1 A B1321 -23.831 -72.590 6.057 1.00 0.13 N
ATOM 21 C2 A B1321 -22.672 -73.045 5.557 1.00 0.13 C
ATOM 22 N3 A B1321 -22.250 -74.286 5.336 1.00 0.13 N
ATOM 23 C4 A B1321 -23.244 -75.104 5.713 1.00 0.13 C
ATOM 24 P U B1322 -20.204 -79.840 8.531 1.00 0.01 P
ATOM 25 OP1 U B1322 -19.946 -81.204 8.998 1.00 0.01 O
ATOM 26 OP2 U B1322 -21.248 -79.075 9.189 1.00 0.01 O
ATOM 27 O5' U B1322 -18.849 -79.003 8.470 1.00 0.01 O
TER
ATOM 2 P U A1322 -20.204 -79.840 8.531 1.00 0.01 P
ATOM 3 OP1 U A1322 -19.946 -81.204 8.998 1.00 0.01 O
ATOM 4 OP2 U A1322 -21.248 -79.075 9.189 1.00 0.01 O
ATOM 5 O5' U A1322 -18.849 -79.003 8.470 1.00 0.01 O
ATOM 6 C5' U A1322 -17.707 -79.384 9.236 1.00 0.01 C
ATOM 7 C4' U A1322 -16.423 -79.060 8.521 1.00 0.01 C
ATOM 8 O4' U A1322 -16.288 -79.924 7.357 1.00 0.01 O
ATOM 9 C3' U A1322 -16.317 -77.632 8.005 1.00 0.01 C
ATOM 10 O3' U A1322 -14.992 -77.158 8.167 1.00 0.01 O
ATOM 11 C2' U A1322 -16.608 -77.787 6.530 1.00 0.01 C
ATOM 12 O2' U A1322 -16.052 -76.785 5.708 1.00 0.01 O
ATOM 13 C1' U A1322 -15.984 -79.141 6.243 1.00 0.01 C
ATOM 14 N1 U A1322 -16.524 -79.786 5.033 1.00 0.01 N
ATOM 15 C2 U A1322 -15.672 -80.202 4.047 1.00 0.01 C
ATOM 16 O2 U A1322 -14.487 -80.132 4.170 1.00 0.01 O
ATOM 17 N3 U A1322 -16.255 -80.725 2.940 1.00 0.01 N
ATOM 18 C4 U A1322 -17.612 -80.847 2.700 1.00 0.01 C
ATOM 19 O4 U A1322 -18.056 -81.337 1.656 1.00 0.01 O
ATOM 20 C5 U A1322 -18.438 -80.362 3.750 1.00 0.01 C
ATOM 21 C6 U A1322 -17.878 -79.846 4.846 1.00 0.01 C
ATOM 22 P C A1323 -14.652 -76.115 9.320 1.00 0.01 P
ATOM 23 OP1 C A1323 -13.229 -75.832 9.230 1.00 0.01 O
ATOM 24 OP2 C A1323 -15.180 -76.671 10.580 1.00 0.01 O
ATOM 25 O5' C A1323 -15.481 -74.846 8.888 1.00 0.01 O
TER
ATOM 1 O3' A B1320 -25.705 -81.286 3.962 1.00 0.01 O
ATOM 2 P A B1321 -25.341 -81.406 5.519 1.00 0.01 P
ATOM 3 OP1 A B1321 -24.847 -82.800 5.727 1.00 0.01 O
ATOM 4 OP2 A B1321 -26.500 -80.933 6.297 1.00 0.01 O
ATOM 5 O5' A B1321 -24.164 -80.396 5.655 1.00 0.01 O
ATOM 6 C5' A B1321 -22.919 -80.717 5.110 1.00 0.01 C
ATOM 7 C4' A B1321 -22.018 -79.545 5.142 1.00 0.01 C
ATOM 8 O4' A B1321 -22.698 -78.401 4.624 1.00 0.01 O
ATOM 9 C3' A B1321 -21.582 -79.100 6.497 1.00 0.01 C
ATOM 10 O3' A B1321 -20.579 -79.923 7.004 1.00 0.01 O
ATOM 11 C2' A B1321 -21.131 -77.686 6.227 1.00 0.01 C
ATOM 12 O2' A B1321 -19.836 -77.688 5.647 1.00 0.01 O
ATOM 13 C1' A B1321 -22.134 -77.253 5.158 1.00 0.01 C
ATOM 14 N9 A B1321 -23.220 -76.452 5.682 1.00 0.13 N
ATOM 15 C8 A B1321 -24.437 -76.888 6.116 1.00 0.13 C
ATOM 16 N7 A B1321 -25.233 -75.913 6.490 1.00 0.13 N
ATOM 17 C5 A B1321 -24.481 -74.790 6.241 1.00 0.13 C
ATOM 18 C6 A B1321 -24.764 -73.463 6.409 1.00 0.13 C
ATOM 19 N6 A B1321 -25.906 -73.036 6.871 1.00 0.13 N
ATOM 20 N1 A B1321 -23.831 -72.590 6.057 1.00 0.13 N
ATOM 21 C2 A B1321 -22.672 -73.045 5.557 1.00 0.13 C
ATOM 22 N3 A B1321 -22.250 -74.286 5.336 1.00 0.13 N
ATOM 23 C4 A B1321 -23.244 -75.104 5.713 1.00 0.13 C
ATOM 24 P U B1322 -20.204 -79.840 8.531 1.00 0.01 P
ATOM 25 OP1 U B1322 -19.946 -81.204 8.998 1.00 0.01 O
ATOM 26 OP2 U B1322 -21.248 -79.075 9.189 1.00 0.01 O
ATOM 27 O5' U B1322 -18.849 -79.003 8.470 1.00 0.01 O
TER
Atoms:
C4: (-17.612,-80.847,2.700)
N3: (-16.255,-80.725,2.940)
OP1: (-19.946,-81.204,8.998)
OP2: (-21.248,-79.075,9.189)
C2: (-15.672,-80.202,4.047)
C1': (-15.984,-79.141,6.243)
C3': (-16.317,-77.632,8.005)
O5': (-18.849,-79.003,8.470)
O4': (-16.288,-79.924,7.357)
C5': (-17.707,-79.384,9.236)
P: (-20.204,-79.840,8.531)
C4': (-16.423,-79.060,8.521)
C2': (-16.608,-77.787,6.530)
O2': (-16.052,-76.785,5.708)
N1: (-16.524,-79.786,5.033)
O4: (-18.056,-81.337,1.656)
O2: (-14.487,-80.132,4.170)
C6: (-17.878,-79.846,4.846)
C5: (-18.438,-80.362,3.750)
O3': (-14.992,-77.158,8.167)
N3: (-16.255,-80.725,2.940)
OP1: (-19.946,-81.204,8.998)
OP2: (-21.248,-79.075,9.189)
C2: (-15.672,-80.202,4.047)
C1': (-15.984,-79.141,6.243)
C3': (-16.317,-77.632,8.005)
O5': (-18.849,-79.003,8.470)
O4': (-16.288,-79.924,7.357)
C5': (-17.707,-79.384,9.236)
P: (-20.204,-79.840,8.531)
C4': (-16.423,-79.060,8.521)
C2': (-16.608,-77.787,6.530)
O2': (-16.052,-76.785,5.708)
N1: (-16.524,-79.786,5.033)
O4: (-18.056,-81.337,1.656)
O2: (-14.487,-80.132,4.170)
C6: (-17.878,-79.846,4.846)
C5: (-18.438,-80.362,3.750)
O3': (-14.992,-77.158,8.167)
OP1: (-24.847,-82.800,5.727)
OP2: (-26.500,-80.933,6.297)
C3': (-21.582,-79.100,6.497)
C1': (-22.134,-77.253,5.158)
C5': (-22.919,-80.717,5.110)
O4': (-22.698,-78.401,4.624)
C8: (-24.437,-76.888,6.116)
O2': (-19.836,-77.688,5.647)
C6: (-24.764,-73.463,6.409)
C5: (-24.481,-74.790,6.241)
C4: (-23.244,-75.104,5.713)
P: (-25.341,-81.406,5.519)
C4': (-22.018,-79.545,5.142)
C2': (-21.131,-77.686,6.227)
C2: (-22.672,-73.045,5.557)
N1: (-23.831,-72.590,6.057)
N3: (-22.250,-74.286,5.336)
N6: (-25.906,-73.036,6.871)
N7: (-25.233,-75.913,6.490)
N9: (-23.220,-76.452,5.682)
O5': (-24.164,-80.396,5.655)
O3': (-20.579,-79.923,7.004)
OP2: (-26.500,-80.933,6.297)
C3': (-21.582,-79.100,6.497)
C1': (-22.134,-77.253,5.158)
C5': (-22.919,-80.717,5.110)
O4': (-22.698,-78.401,4.624)
C8: (-24.437,-76.888,6.116)
O2': (-19.836,-77.688,5.647)
C6: (-24.764,-73.463,6.409)
C5: (-24.481,-74.790,6.241)
C4: (-23.244,-75.104,5.713)
P: (-25.341,-81.406,5.519)
C4': (-22.018,-79.545,5.142)
C2': (-21.131,-77.686,6.227)
C2: (-22.672,-73.045,5.557)
N1: (-23.831,-72.590,6.057)
N3: (-22.250,-74.286,5.336)
N6: (-25.906,-73.036,6.871)
N7: (-25.233,-75.913,6.490)
N9: (-23.220,-76.452,5.682)
O5': (-24.164,-80.396,5.655)
O3': (-20.579,-79.923,7.004)
Image (generated by PyMOL):