Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1547:A1546
Extra
PDB:
ATOM 1 O3' A A1546 -16.279 -24.129 2.524 1.00 8.49 O
ATOM 2 P U A1547 -16.740 -22.617 2.919 1.00 0.47 P
ATOM 3 OP1 U A1547 -17.205 -21.958 1.679 1.00 0.47 O
ATOM 4 OP2 U A1547 -15.633 -21.992 3.686 1.00 0.47 O
ATOM 5 O5' U A1547 -17.969 -22.872 3.891 1.00 0.47 O
ATOM 6 C5' U A1547 -17.753 -22.995 5.293 1.00 0.47 C
ATOM 7 C4' U A1547 -18.507 -24.156 5.880 1.00 0.47 C
ATOM 8 O4' U A1547 -19.314 -24.773 4.855 1.00 0.47 O
ATOM 9 C3' U A1547 -17.643 -25.265 6.467 1.00 0.47 C
ATOM 10 O3' U A1547 -18.182 -25.658 7.701 1.00 0.47 O
ATOM 11 C2' U A1547 -17.779 -26.415 5.479 1.00 0.47 C
ATOM 12 O2' U A1547 -17.694 -27.700 6.073 1.00 0.47 O
ATOM 13 C1' U A1547 -19.157 -26.168 4.915 1.00 0.47 C
ATOM 14 N1 U A1547 -19.345 -26.707 3.584 1.00 0.33 N
ATOM 15 C2 U A1547 -20.056 -27.886 3.563 1.00 0.33 C
ATOM 16 O2 U A1547 -20.488 -28.426 4.567 1.00 0.33 O
ATOM 17 N3 U A1547 -20.260 -28.412 2.334 1.00 0.33 N
ATOM 18 C4 U A1547 -19.853 -27.884 1.144 1.00 0.33 C
ATOM 19 O4 U A1547 -20.136 -28.528 0.119 1.00 0.33 O
ATOM 20 C5 U A1547 -19.119 -26.634 1.264 1.00 0.33 C
ATOM 21 C6 U A1547 -18.888 -26.087 2.461 1.00 0.33 C
ATOM 22 P G A1548 -17.732 -24.891 9.021 1.00 14.86 P
ATOM 23 OP1 G A1548 -18.963 -24.290 9.614 1.00 14.86 O
ATOM 24 OP2 G A1548 -16.615 -23.984 8.633 1.00 14.86 O
ATOM 25 O5' G A1548 -17.188 -26.092 9.934 1.00 14.86 O
TER
ATOM 1 O3' A B1545 -11.988 -23.048 -1.549 1.00 14.63 O
ATOM 2 P A B1546 -12.337 -21.866 -0.497 1.00 8.49 P
ATOM 3 OP1 A B1546 -13.737 -21.430 -0.772 1.00 8.49 O
ATOM 4 OP2 A B1546 -11.240 -20.873 -0.562 1.00 8.49 O
ATOM 5 O5' A B1546 -12.292 -22.592 0.897 1.00 8.49 O
ATOM 6 C5' A B1546 -13.469 -22.711 1.670 1.00 8.49 C
ATOM 7 C4' A B1546 -14.045 -24.066 1.511 1.00 8.49 C
ATOM 8 O4' A B1546 -12.954 -25.008 1.442 1.00 8.49 O
ATOM 9 C3' A B1546 -14.925 -24.557 2.648 1.00 8.49 C
ATOM 10 O3' A B1546 -16.279 -24.129 2.524 1.00 8.49 O
ATOM 11 C2' A B1546 -14.774 -26.061 2.534 1.00 8.49 C
ATOM 12 O2' A B1546 -15.619 -26.560 1.500 1.00 8.49 O
ATOM 13 C1' A B1546 -13.315 -26.199 2.074 1.00 8.49 C
ATOM 14 N9 A B1546 -12.376 -26.428 3.187 1.00 8.68 N
ATOM 15 C8 A B1546 -11.161 -25.807 3.379 1.00 8.68 C
ATOM 16 N7 A B1546 -10.523 -26.227 4.457 1.00 8.68 N
ATOM 17 C5 A B1546 -11.358 -27.184 4.995 1.00 8.68 C
ATOM 18 C6 A B1546 -11.249 -27.983 6.120 1.00 8.68 C
ATOM 19 N6 A B1546 -10.236 -27.974 6.970 1.00 8.68 N
ATOM 20 N1 A B1546 -12.234 -28.835 6.374 1.00 8.68 N
ATOM 21 C2 A B1546 -13.259 -28.864 5.527 1.00 8.68 C
ATOM 22 N3 A B1546 -13.494 -28.155 4.431 1.00 8.68 N
ATOM 23 C4 A B1546 -12.488 -27.321 4.224 1.00 8.68 C
ATOM 24 P U B1547 -16.740 -22.617 2.919 1.00 0.47 P
ATOM 25 OP1 U B1547 -17.205 -21.958 1.679 1.00 0.47 O
ATOM 26 OP2 U B1547 -15.633 -21.992 3.686 1.00 0.47 O
ATOM 27 O5' U B1547 -17.969 -22.872 3.891 1.00 0.47 O
TER
ATOM 2 P U A1547 -16.740 -22.617 2.919 1.00 0.47 P
ATOM 3 OP1 U A1547 -17.205 -21.958 1.679 1.00 0.47 O
ATOM 4 OP2 U A1547 -15.633 -21.992 3.686 1.00 0.47 O
ATOM 5 O5' U A1547 -17.969 -22.872 3.891 1.00 0.47 O
ATOM 6 C5' U A1547 -17.753 -22.995 5.293 1.00 0.47 C
ATOM 7 C4' U A1547 -18.507 -24.156 5.880 1.00 0.47 C
ATOM 8 O4' U A1547 -19.314 -24.773 4.855 1.00 0.47 O
ATOM 9 C3' U A1547 -17.643 -25.265 6.467 1.00 0.47 C
ATOM 10 O3' U A1547 -18.182 -25.658 7.701 1.00 0.47 O
ATOM 11 C2' U A1547 -17.779 -26.415 5.479 1.00 0.47 C
ATOM 12 O2' U A1547 -17.694 -27.700 6.073 1.00 0.47 O
ATOM 13 C1' U A1547 -19.157 -26.168 4.915 1.00 0.47 C
ATOM 14 N1 U A1547 -19.345 -26.707 3.584 1.00 0.33 N
ATOM 15 C2 U A1547 -20.056 -27.886 3.563 1.00 0.33 C
ATOM 16 O2 U A1547 -20.488 -28.426 4.567 1.00 0.33 O
ATOM 17 N3 U A1547 -20.260 -28.412 2.334 1.00 0.33 N
ATOM 18 C4 U A1547 -19.853 -27.884 1.144 1.00 0.33 C
ATOM 19 O4 U A1547 -20.136 -28.528 0.119 1.00 0.33 O
ATOM 20 C5 U A1547 -19.119 -26.634 1.264 1.00 0.33 C
ATOM 21 C6 U A1547 -18.888 -26.087 2.461 1.00 0.33 C
ATOM 22 P G A1548 -17.732 -24.891 9.021 1.00 14.86 P
ATOM 23 OP1 G A1548 -18.963 -24.290 9.614 1.00 14.86 O
ATOM 24 OP2 G A1548 -16.615 -23.984 8.633 1.00 14.86 O
ATOM 25 O5' G A1548 -17.188 -26.092 9.934 1.00 14.86 O
TER
ATOM 1 O3' A B1545 -11.988 -23.048 -1.549 1.00 14.63 O
ATOM 2 P A B1546 -12.337 -21.866 -0.497 1.00 8.49 P
ATOM 3 OP1 A B1546 -13.737 -21.430 -0.772 1.00 8.49 O
ATOM 4 OP2 A B1546 -11.240 -20.873 -0.562 1.00 8.49 O
ATOM 5 O5' A B1546 -12.292 -22.592 0.897 1.00 8.49 O
ATOM 6 C5' A B1546 -13.469 -22.711 1.670 1.00 8.49 C
ATOM 7 C4' A B1546 -14.045 -24.066 1.511 1.00 8.49 C
ATOM 8 O4' A B1546 -12.954 -25.008 1.442 1.00 8.49 O
ATOM 9 C3' A B1546 -14.925 -24.557 2.648 1.00 8.49 C
ATOM 10 O3' A B1546 -16.279 -24.129 2.524 1.00 8.49 O
ATOM 11 C2' A B1546 -14.774 -26.061 2.534 1.00 8.49 C
ATOM 12 O2' A B1546 -15.619 -26.560 1.500 1.00 8.49 O
ATOM 13 C1' A B1546 -13.315 -26.199 2.074 1.00 8.49 C
ATOM 14 N9 A B1546 -12.376 -26.428 3.187 1.00 8.68 N
ATOM 15 C8 A B1546 -11.161 -25.807 3.379 1.00 8.68 C
ATOM 16 N7 A B1546 -10.523 -26.227 4.457 1.00 8.68 N
ATOM 17 C5 A B1546 -11.358 -27.184 4.995 1.00 8.68 C
ATOM 18 C6 A B1546 -11.249 -27.983 6.120 1.00 8.68 C
ATOM 19 N6 A B1546 -10.236 -27.974 6.970 1.00 8.68 N
ATOM 20 N1 A B1546 -12.234 -28.835 6.374 1.00 8.68 N
ATOM 21 C2 A B1546 -13.259 -28.864 5.527 1.00 8.68 C
ATOM 22 N3 A B1546 -13.494 -28.155 4.431 1.00 8.68 N
ATOM 23 C4 A B1546 -12.488 -27.321 4.224 1.00 8.68 C
ATOM 24 P U B1547 -16.740 -22.617 2.919 1.00 0.47 P
ATOM 25 OP1 U B1547 -17.205 -21.958 1.679 1.00 0.47 O
ATOM 26 OP2 U B1547 -15.633 -21.992 3.686 1.00 0.47 O
ATOM 27 O5' U B1547 -17.969 -22.872 3.891 1.00 0.47 O
TER
Atoms:
C4: (-19.853,-27.884,1.144)
N3: (-20.260,-28.412,2.334)
OP1: (-17.205,-21.958,1.679)
OP2: (-15.633,-21.992,3.686)
C2: (-20.056,-27.886,3.563)
C1': (-19.157,-26.168,4.915)
C3': (-17.643,-25.265,6.467)
O5': (-17.969,-22.872,3.891)
O4': (-19.314,-24.773,4.855)
C5': (-17.753,-22.995,5.293)
P: (-16.740,-22.617,2.919)
C4': (-18.507,-24.156,5.880)
C2': (-17.779,-26.415,5.479)
O2': (-17.694,-27.700,6.073)
N1: (-19.345,-26.707,3.584)
O4: (-20.136,-28.528,0.119)
O2: (-20.488,-28.426,4.567)
C6: (-18.888,-26.087,2.461)
C5: (-19.119,-26.634,1.264)
O3': (-18.182,-25.658,7.701)
N3: (-20.260,-28.412,2.334)
OP1: (-17.205,-21.958,1.679)
OP2: (-15.633,-21.992,3.686)
C2: (-20.056,-27.886,3.563)
C1': (-19.157,-26.168,4.915)
C3': (-17.643,-25.265,6.467)
O5': (-17.969,-22.872,3.891)
O4': (-19.314,-24.773,4.855)
C5': (-17.753,-22.995,5.293)
P: (-16.740,-22.617,2.919)
C4': (-18.507,-24.156,5.880)
C2': (-17.779,-26.415,5.479)
O2': (-17.694,-27.700,6.073)
N1: (-19.345,-26.707,3.584)
O4: (-20.136,-28.528,0.119)
O2: (-20.488,-28.426,4.567)
C6: (-18.888,-26.087,2.461)
C5: (-19.119,-26.634,1.264)
O3': (-18.182,-25.658,7.701)
OP1: (-13.737,-21.430,-0.772)
OP2: (-11.240,-20.873,-0.562)
C3': (-14.925,-24.557,2.648)
C1': (-13.315,-26.199,2.074)
C5': (-13.469,-22.711,1.670)
O4': (-12.954,-25.008,1.442)
C8: (-11.161,-25.807,3.379)
O2': (-15.619,-26.560,1.500)
C6: (-11.249,-27.983,6.120)
C5: (-11.358,-27.184,4.995)
C4: (-12.488,-27.321,4.224)
P: (-12.337,-21.866,-0.497)
C4': (-14.045,-24.066,1.511)
C2': (-14.774,-26.061,2.534)
C2: (-13.259,-28.864,5.527)
N1: (-12.234,-28.835,6.374)
N3: (-13.494,-28.155,4.431)
N6: (-10.236,-27.974,6.970)
N7: (-10.523,-26.227,4.457)
N9: (-12.376,-26.428,3.187)
O5': (-12.292,-22.592,0.897)
O3': (-16.279,-24.129,2.524)
OP2: (-11.240,-20.873,-0.562)
C3': (-14.925,-24.557,2.648)
C1': (-13.315,-26.199,2.074)
C5': (-13.469,-22.711,1.670)
O4': (-12.954,-25.008,1.442)
C8: (-11.161,-25.807,3.379)
O2': (-15.619,-26.560,1.500)
C6: (-11.249,-27.983,6.120)
C5: (-11.358,-27.184,4.995)
C4: (-12.488,-27.321,4.224)
P: (-12.337,-21.866,-0.497)
C4': (-14.045,-24.066,1.511)
C2': (-14.774,-26.061,2.534)
C2: (-13.259,-28.864,5.527)
N1: (-12.234,-28.835,6.374)
N3: (-13.494,-28.155,4.431)
N6: (-10.236,-27.974,6.970)
N7: (-10.523,-26.227,4.457)
N9: (-12.376,-26.428,3.187)
O5': (-12.292,-22.592,0.897)
O3': (-16.279,-24.129,2.524)
Image (generated by PyMOL):