Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0446:0464
Extra
PDB:
ATOM 1 O3' U A 445 50.071 129.937 53.249 1.00 27.79 O
ATOM 2 P G A 446 50.527 129.903 54.785 1.00 28.23 P
ATOM 3 OP1 G A 446 51.751 129.069 54.805 1.00 27.97 O
ATOM 4 OP2 G A 446 49.373 129.530 55.639 1.00 27.43 O
ATOM 5 O5' G A 446 50.903 131.415 55.118 1.00 26.91 O
ATOM 6 C5' G A 446 50.783 131.919 56.454 1.00 26.40 C
ATOM 7 C4' G A 446 51.057 133.396 56.479 1.00 26.97 C
ATOM 8 O4' G A 446 52.388 133.635 55.978 1.00 29.70 O
ATOM 9 C3' G A 446 50.156 134.246 55.605 1.00 28.32 C
ATOM 10 O3' G A 446 48.991 134.577 56.346 1.00 29.81 O
ATOM 11 C2' G A 446 51.020 135.472 55.338 1.00 28.74 C
ATOM 12 O2' G A 446 51.037 136.355 56.436 1.00 28.41 O
ATOM 13 C1' G A 446 52.413 134.848 55.249 1.00 29.46 C
ATOM 14 N9 G A 446 52.938 134.566 53.914 1.00 30.75 N
ATOM 15 C8 G A 446 53.300 133.334 53.418 1.00 29.67 C
ATOM 16 N7 G A 446 53.840 133.395 52.235 1.00 28.42 N
ATOM 17 C5 G A 446 53.817 134.744 51.917 1.00 29.11 C
ATOM 18 C6 G A 446 54.295 135.407 50.783 1.00 28.54 C
ATOM 19 O6 G A 446 54.887 134.929 49.819 1.00 32.52 O
ATOM 20 N1 G A 446 54.049 136.774 50.843 1.00 27.61 N
ATOM 21 C2 G A 446 53.440 137.422 51.884 1.00 27.52 C
ATOM 22 N2 G A 446 53.287 138.745 51.747 1.00 26.53 N
ATOM 23 N3 G A 446 53.011 136.814 52.976 1.00 29.17 N
ATOM 24 C4 G A 446 53.230 135.479 52.925 1.00 30.35 C
ATOM 25 P A A 447 47.558 134.578 55.636 1.00 30.88 P
ATOM 26 OP1 A A 447 46.569 134.838 56.702 1.00 29.49 O
ATOM 27 OP2 A A 447 47.434 133.355 54.810 1.00 33.65 O
ATOM 28 O5' A A 447 47.621 135.840 54.668 1.00 30.84 O
TER
ATOM 1 O3' G B 463 54.730 137.048 60.230 1.00 25.74 O
ATOM 2 P A B 464 53.710 136.492 59.125 1.00 27.48 P
ATOM 3 OP1 A B 464 52.773 135.609 59.855 1.00 27.35 O
ATOM 4 OP2 A B 464 54.438 135.963 57.944 1.00 27.08 O
ATOM 5 O5' A B 464 52.959 137.814 58.660 1.00 27.97 O
ATOM 6 C5' A B 464 51.601 138.057 59.025 1.00 26.61 C
ATOM 7 C4' A B 464 51.527 138.558 60.439 1.00 26.66 C
ATOM 8 O4' A B 464 52.446 139.663 60.625 1.00 27.43 O
ATOM 9 C3' A B 464 50.166 139.129 60.762 1.00 28.84 C
ATOM 10 O3' A B 464 49.269 138.101 61.125 1.00 28.73 O
ATOM 11 C2' A B 464 50.465 140.138 61.861 1.00 28.16 C
ATOM 12 O2' A B 464 50.569 139.553 63.140 1.00 31.03 O
ATOM 13 C1' A B 464 51.816 140.689 61.391 1.00 27.19 C
ATOM 14 N9 A B 464 51.681 141.865 60.528 1.00 24.31 N
ATOM 15 C8 A B 464 52.092 141.988 59.224 1.00 23.72 C
ATOM 16 N7 A B 464 51.823 143.151 58.692 1.00 21.80 N
ATOM 17 C5 A B 464 51.203 143.847 59.714 1.00 20.85 C
ATOM 18 C6 A B 464 50.700 145.143 59.786 1.00 19.91 C
ATOM 19 N6 A B 464 50.765 146.014 58.778 1.00 20.50 N
ATOM 20 N1 A B 464 50.131 145.531 60.943 1.00 18.24 N
ATOM 21 C2 A B 464 50.099 144.668 61.959 1.00 19.96 C
ATOM 22 N3 A B 464 50.561 143.423 62.023 1.00 22.78 N
ATOM 23 C4 A B 464 51.106 143.068 60.850 1.00 22.28 C
ATOM 24 P A B 465 47.889 137.953 60.335 1.00 29.20 P
ATOM 25 OP1 A B 465 47.321 136.631 60.667 1.00 30.28 O
ATOM 26 OP2 A B 465 48.096 138.323 58.914 1.00 27.76 O
ATOM 27 O5' A B 465 46.991 139.069 61.011 1.00 28.57 O
TER
ATOM 2 P G A 446 50.527 129.903 54.785 1.00 28.23 P
ATOM 3 OP1 G A 446 51.751 129.069 54.805 1.00 27.97 O
ATOM 4 OP2 G A 446 49.373 129.530 55.639 1.00 27.43 O
ATOM 5 O5' G A 446 50.903 131.415 55.118 1.00 26.91 O
ATOM 6 C5' G A 446 50.783 131.919 56.454 1.00 26.40 C
ATOM 7 C4' G A 446 51.057 133.396 56.479 1.00 26.97 C
ATOM 8 O4' G A 446 52.388 133.635 55.978 1.00 29.70 O
ATOM 9 C3' G A 446 50.156 134.246 55.605 1.00 28.32 C
ATOM 10 O3' G A 446 48.991 134.577 56.346 1.00 29.81 O
ATOM 11 C2' G A 446 51.020 135.472 55.338 1.00 28.74 C
ATOM 12 O2' G A 446 51.037 136.355 56.436 1.00 28.41 O
ATOM 13 C1' G A 446 52.413 134.848 55.249 1.00 29.46 C
ATOM 14 N9 G A 446 52.938 134.566 53.914 1.00 30.75 N
ATOM 15 C8 G A 446 53.300 133.334 53.418 1.00 29.67 C
ATOM 16 N7 G A 446 53.840 133.395 52.235 1.00 28.42 N
ATOM 17 C5 G A 446 53.817 134.744 51.917 1.00 29.11 C
ATOM 18 C6 G A 446 54.295 135.407 50.783 1.00 28.54 C
ATOM 19 O6 G A 446 54.887 134.929 49.819 1.00 32.52 O
ATOM 20 N1 G A 446 54.049 136.774 50.843 1.00 27.61 N
ATOM 21 C2 G A 446 53.440 137.422 51.884 1.00 27.52 C
ATOM 22 N2 G A 446 53.287 138.745 51.747 1.00 26.53 N
ATOM 23 N3 G A 446 53.011 136.814 52.976 1.00 29.17 N
ATOM 24 C4 G A 446 53.230 135.479 52.925 1.00 30.35 C
ATOM 25 P A A 447 47.558 134.578 55.636 1.00 30.88 P
ATOM 26 OP1 A A 447 46.569 134.838 56.702 1.00 29.49 O
ATOM 27 OP2 A A 447 47.434 133.355 54.810 1.00 33.65 O
ATOM 28 O5' A A 447 47.621 135.840 54.668 1.00 30.84 O
TER
ATOM 1 O3' G B 463 54.730 137.048 60.230 1.00 25.74 O
ATOM 2 P A B 464 53.710 136.492 59.125 1.00 27.48 P
ATOM 3 OP1 A B 464 52.773 135.609 59.855 1.00 27.35 O
ATOM 4 OP2 A B 464 54.438 135.963 57.944 1.00 27.08 O
ATOM 5 O5' A B 464 52.959 137.814 58.660 1.00 27.97 O
ATOM 6 C5' A B 464 51.601 138.057 59.025 1.00 26.61 C
ATOM 7 C4' A B 464 51.527 138.558 60.439 1.00 26.66 C
ATOM 8 O4' A B 464 52.446 139.663 60.625 1.00 27.43 O
ATOM 9 C3' A B 464 50.166 139.129 60.762 1.00 28.84 C
ATOM 10 O3' A B 464 49.269 138.101 61.125 1.00 28.73 O
ATOM 11 C2' A B 464 50.465 140.138 61.861 1.00 28.16 C
ATOM 12 O2' A B 464 50.569 139.553 63.140 1.00 31.03 O
ATOM 13 C1' A B 464 51.816 140.689 61.391 1.00 27.19 C
ATOM 14 N9 A B 464 51.681 141.865 60.528 1.00 24.31 N
ATOM 15 C8 A B 464 52.092 141.988 59.224 1.00 23.72 C
ATOM 16 N7 A B 464 51.823 143.151 58.692 1.00 21.80 N
ATOM 17 C5 A B 464 51.203 143.847 59.714 1.00 20.85 C
ATOM 18 C6 A B 464 50.700 145.143 59.786 1.00 19.91 C
ATOM 19 N6 A B 464 50.765 146.014 58.778 1.00 20.50 N
ATOM 20 N1 A B 464 50.131 145.531 60.943 1.00 18.24 N
ATOM 21 C2 A B 464 50.099 144.668 61.959 1.00 19.96 C
ATOM 22 N3 A B 464 50.561 143.423 62.023 1.00 22.78 N
ATOM 23 C4 A B 464 51.106 143.068 60.850 1.00 22.28 C
ATOM 24 P A B 465 47.889 137.953 60.335 1.00 29.20 P
ATOM 25 OP1 A B 465 47.321 136.631 60.667 1.00 30.28 O
ATOM 26 OP2 A B 465 48.096 138.323 58.914 1.00 27.76 O
ATOM 27 O5' A B 465 46.991 139.069 61.011 1.00 28.57 O
TER
Atoms:
OP1: (51.751,129.069,54.805)
OP2: (49.373,129.530,55.639)
C3': (50.156,134.246,55.605)
C1': (52.413,134.848,55.249)
C5': (50.783,131.919,56.454)
O6: (54.887,134.929,49.819)
O4': (52.388,133.635,55.978)
C8: (53.300,133.334,53.418)
C2: (53.440,137.422,51.884)
C6: (54.295,135.407,50.783)
C5: (53.817,134.744,51.917)
C4: (53.230,135.479,52.925)
P: (50.527,129.903,54.785)
C4': (51.057,133.396,56.479)
C2': (51.020,135.472,55.338)
O2': (51.037,136.355,56.436)
N1: (54.049,136.774,50.843)
N2: (53.287,138.745,51.747)
N3: (53.011,136.814,52.976)
N7: (53.840,133.395,52.235)
N9: (52.938,134.566,53.914)
O5': (50.903,131.415,55.118)
O3': (48.991,134.577,56.346)
OP2: (49.373,129.530,55.639)
C3': (50.156,134.246,55.605)
C1': (52.413,134.848,55.249)
C5': (50.783,131.919,56.454)
O6: (54.887,134.929,49.819)
O4': (52.388,133.635,55.978)
C8: (53.300,133.334,53.418)
C2: (53.440,137.422,51.884)
C6: (54.295,135.407,50.783)
C5: (53.817,134.744,51.917)
C4: (53.230,135.479,52.925)
P: (50.527,129.903,54.785)
C4': (51.057,133.396,56.479)
C2': (51.020,135.472,55.338)
O2': (51.037,136.355,56.436)
N1: (54.049,136.774,50.843)
N2: (53.287,138.745,51.747)
N3: (53.011,136.814,52.976)
N7: (53.840,133.395,52.235)
N9: (52.938,134.566,53.914)
O5': (50.903,131.415,55.118)
O3': (48.991,134.577,56.346)
OP1: (52.773,135.609,59.855)
OP2: (54.438,135.963,57.944)
C3': (50.166,139.129,60.762)
C1': (51.816,140.689,61.391)
C5': (51.601,138.057,59.025)
O4': (52.446,139.663,60.625)
C8: (52.092,141.988,59.224)
O2': (50.569,139.553,63.140)
C6: (50.700,145.143,59.786)
C5: (51.203,143.847,59.714)
C4: (51.106,143.068,60.850)
P: (53.710,136.492,59.125)
C4': (51.527,138.558,60.439)
C2': (50.465,140.138,61.861)
C2: (50.099,144.668,61.959)
N1: (50.131,145.531,60.943)
N3: (50.561,143.423,62.023)
N6: (50.765,146.014,58.778)
N7: (51.823,143.151,58.692)
N9: (51.681,141.865,60.528)
O5': (52.959,137.814,58.660)
O3': (49.269,138.101,61.125)
OP2: (54.438,135.963,57.944)
C3': (50.166,139.129,60.762)
C1': (51.816,140.689,61.391)
C5': (51.601,138.057,59.025)
O4': (52.446,139.663,60.625)
C8: (52.092,141.988,59.224)
O2': (50.569,139.553,63.140)
C6: (50.700,145.143,59.786)
C5: (51.203,143.847,59.714)
C4: (51.106,143.068,60.850)
P: (53.710,136.492,59.125)
C4': (51.527,138.558,60.439)
C2': (50.465,140.138,61.861)
C2: (50.099,144.668,61.959)
N1: (50.131,145.531,60.943)
N3: (50.561,143.423,62.023)
N6: (50.765,146.014,58.778)
N7: (51.823,143.151,58.692)
N9: (51.681,141.865,60.528)
O5': (52.959,137.814,58.660)
O3': (49.269,138.101,61.125)
Image (generated by PyMOL):