Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0446:0464
Extra
PDB:
ATOM 1 O3' U A 445 50.231 130.218 53.570 1.00 40.20 O
ATOM 2 P G A 446 50.696 130.275 55.111 1.00 39.76 P
ATOM 3 OP1 G A 446 51.987 129.531 55.135 1.00 38.30 O
ATOM 4 OP2 G A 446 49.580 129.839 55.988 1.00 37.61 O
ATOM 5 O5' G A 446 50.966 131.821 55.383 1.00 36.70 O
ATOM 6 C5' G A 446 50.978 132.342 56.716 1.00 34.41 C
ATOM 7 C4' G A 446 51.230 133.826 56.688 1.00 34.88 C
ATOM 8 O4' G A 446 52.538 134.087 56.123 1.00 34.78 O
ATOM 9 C3' G A 446 50.277 134.629 55.827 1.00 35.06 C
ATOM 10 O3' G A 446 49.107 134.929 56.585 1.00 37.75 O
ATOM 11 C2' G A 446 51.096 135.875 55.506 1.00 34.31 C
ATOM 12 O2' G A 446 51.098 136.799 56.571 1.00 33.13 O
ATOM 13 C1' G A 446 52.508 135.299 55.399 1.00 33.14 C
ATOM 14 N9 G A 446 53.035 135.041 54.064 1.00 34.32 N
ATOM 15 C8 G A 446 53.368 133.816 53.536 1.00 34.58 C
ATOM 16 N7 G A 446 53.930 133.898 52.364 1.00 34.03 N
ATOM 17 C5 G A 446 53.953 135.257 52.089 1.00 33.19 C
ATOM 18 C6 G A 446 54.473 135.945 50.986 1.00 32.99 C
ATOM 19 O6 G A 446 55.083 135.484 50.020 1.00 35.88 O
ATOM 20 N1 G A 446 54.258 137.316 51.085 1.00 32.83 N
ATOM 21 C2 G A 446 53.647 137.948 52.137 1.00 32.71 C
ATOM 22 N2 G A 446 53.537 139.283 52.049 1.00 30.61 N
ATOM 23 N3 G A 446 53.181 137.314 53.199 1.00 33.33 N
ATOM 24 C4 G A 446 53.367 135.976 53.108 1.00 34.09 C
ATOM 25 P A A 447 47.662 134.888 55.884 1.00 38.99 P
ATOM 26 OP1 A A 447 46.652 135.161 56.923 1.00 36.73 O
ATOM 27 OP2 A A 447 47.578 133.633 55.098 1.00 41.21 O
ATOM 28 O5' A A 447 47.696 136.127 54.891 1.00 38.38 O
TER
ATOM 1 O3' G B 463 54.933 137.295 60.451 1.00 37.73 O
ATOM 2 P A B 464 53.908 136.860 59.302 1.00 37.76 P
ATOM 3 OP1 A B 464 52.981 135.894 59.929 1.00 37.75 O
ATOM 4 OP2 A B 464 54.649 136.475 58.071 1.00 36.97 O
ATOM 5 O5' A B 464 53.149 138.219 58.991 1.00 37.21 O
ATOM 6 C5' A B 464 51.770 138.388 59.323 1.00 36.73 C
ATOM 7 C4' A B 464 51.636 138.939 60.715 1.00 36.14 C
ATOM 8 O4' A B 464 52.507 140.083 60.884 1.00 35.68 O
ATOM 9 C3' A B 464 50.250 139.464 60.999 1.00 37.16 C
ATOM 10 O3' A B 464 49.377 138.422 61.370 1.00 38.42 O
ATOM 11 C2' A B 464 50.484 140.514 62.074 1.00 36.03 C
ATOM 12 O2' A B 464 50.550 139.972 63.374 1.00 37.52 O
ATOM 13 C1' A B 464 51.835 141.092 61.628 1.00 34.67 C
ATOM 14 N9 A B 464 51.719 142.269 60.766 1.00 31.25 N
ATOM 15 C8 A B 464 52.155 142.396 59.471 1.00 30.00 C
ATOM 16 N7 A B 464 51.927 143.573 58.948 1.00 29.30 N
ATOM 17 C5 A B 464 51.305 144.272 59.966 1.00 27.53 C
ATOM 18 C6 A B 464 50.842 145.579 60.047 1.00 26.65 C
ATOM 19 N6 A B 464 50.961 146.463 59.057 1.00 26.53 N
ATOM 20 N1 A B 464 50.257 145.965 61.197 1.00 27.79 N
ATOM 21 C2 A B 464 50.171 145.081 62.202 1.00 28.91 C
ATOM 22 N3 A B 464 50.590 143.824 62.252 1.00 28.19 N
ATOM 23 C4 A B 464 51.156 143.478 61.088 1.00 28.78 C
ATOM 24 P A B 465 47.950 138.319 60.662 1.00 40.67 P
ATOM 25 OP1 A B 465 47.322 137.037 61.049 1.00 39.20 O
ATOM 26 OP2 A B 465 48.132 138.645 59.221 1.00 39.63 O
ATOM 27 O5' A B 465 47.144 139.507 61.339 1.00 39.50 O
TER
ATOM 2 P G A 446 50.696 130.275 55.111 1.00 39.76 P
ATOM 3 OP1 G A 446 51.987 129.531 55.135 1.00 38.30 O
ATOM 4 OP2 G A 446 49.580 129.839 55.988 1.00 37.61 O
ATOM 5 O5' G A 446 50.966 131.821 55.383 1.00 36.70 O
ATOM 6 C5' G A 446 50.978 132.342 56.716 1.00 34.41 C
ATOM 7 C4' G A 446 51.230 133.826 56.688 1.00 34.88 C
ATOM 8 O4' G A 446 52.538 134.087 56.123 1.00 34.78 O
ATOM 9 C3' G A 446 50.277 134.629 55.827 1.00 35.06 C
ATOM 10 O3' G A 446 49.107 134.929 56.585 1.00 37.75 O
ATOM 11 C2' G A 446 51.096 135.875 55.506 1.00 34.31 C
ATOM 12 O2' G A 446 51.098 136.799 56.571 1.00 33.13 O
ATOM 13 C1' G A 446 52.508 135.299 55.399 1.00 33.14 C
ATOM 14 N9 G A 446 53.035 135.041 54.064 1.00 34.32 N
ATOM 15 C8 G A 446 53.368 133.816 53.536 1.00 34.58 C
ATOM 16 N7 G A 446 53.930 133.898 52.364 1.00 34.03 N
ATOM 17 C5 G A 446 53.953 135.257 52.089 1.00 33.19 C
ATOM 18 C6 G A 446 54.473 135.945 50.986 1.00 32.99 C
ATOM 19 O6 G A 446 55.083 135.484 50.020 1.00 35.88 O
ATOM 20 N1 G A 446 54.258 137.316 51.085 1.00 32.83 N
ATOM 21 C2 G A 446 53.647 137.948 52.137 1.00 32.71 C
ATOM 22 N2 G A 446 53.537 139.283 52.049 1.00 30.61 N
ATOM 23 N3 G A 446 53.181 137.314 53.199 1.00 33.33 N
ATOM 24 C4 G A 446 53.367 135.976 53.108 1.00 34.09 C
ATOM 25 P A A 447 47.662 134.888 55.884 1.00 38.99 P
ATOM 26 OP1 A A 447 46.652 135.161 56.923 1.00 36.73 O
ATOM 27 OP2 A A 447 47.578 133.633 55.098 1.00 41.21 O
ATOM 28 O5' A A 447 47.696 136.127 54.891 1.00 38.38 O
TER
ATOM 1 O3' G B 463 54.933 137.295 60.451 1.00 37.73 O
ATOM 2 P A B 464 53.908 136.860 59.302 1.00 37.76 P
ATOM 3 OP1 A B 464 52.981 135.894 59.929 1.00 37.75 O
ATOM 4 OP2 A B 464 54.649 136.475 58.071 1.00 36.97 O
ATOM 5 O5' A B 464 53.149 138.219 58.991 1.00 37.21 O
ATOM 6 C5' A B 464 51.770 138.388 59.323 1.00 36.73 C
ATOM 7 C4' A B 464 51.636 138.939 60.715 1.00 36.14 C
ATOM 8 O4' A B 464 52.507 140.083 60.884 1.00 35.68 O
ATOM 9 C3' A B 464 50.250 139.464 60.999 1.00 37.16 C
ATOM 10 O3' A B 464 49.377 138.422 61.370 1.00 38.42 O
ATOM 11 C2' A B 464 50.484 140.514 62.074 1.00 36.03 C
ATOM 12 O2' A B 464 50.550 139.972 63.374 1.00 37.52 O
ATOM 13 C1' A B 464 51.835 141.092 61.628 1.00 34.67 C
ATOM 14 N9 A B 464 51.719 142.269 60.766 1.00 31.25 N
ATOM 15 C8 A B 464 52.155 142.396 59.471 1.00 30.00 C
ATOM 16 N7 A B 464 51.927 143.573 58.948 1.00 29.30 N
ATOM 17 C5 A B 464 51.305 144.272 59.966 1.00 27.53 C
ATOM 18 C6 A B 464 50.842 145.579 60.047 1.00 26.65 C
ATOM 19 N6 A B 464 50.961 146.463 59.057 1.00 26.53 N
ATOM 20 N1 A B 464 50.257 145.965 61.197 1.00 27.79 N
ATOM 21 C2 A B 464 50.171 145.081 62.202 1.00 28.91 C
ATOM 22 N3 A B 464 50.590 143.824 62.252 1.00 28.19 N
ATOM 23 C4 A B 464 51.156 143.478 61.088 1.00 28.78 C
ATOM 24 P A B 465 47.950 138.319 60.662 1.00 40.67 P
ATOM 25 OP1 A B 465 47.322 137.037 61.049 1.00 39.20 O
ATOM 26 OP2 A B 465 48.132 138.645 59.221 1.00 39.63 O
ATOM 27 O5' A B 465 47.144 139.507 61.339 1.00 39.50 O
TER
Atoms:
OP1: (51.987,129.531,55.135)
OP2: (49.580,129.839,55.988)
C3': (50.277,134.629,55.827)
C1': (52.508,135.299,55.399)
C5': (50.978,132.342,56.716)
O6: (55.083,135.484,50.020)
O4': (52.538,134.087,56.123)
C8: (53.368,133.816,53.536)
C2: (53.647,137.948,52.137)
C6: (54.473,135.945,50.986)
C5: (53.953,135.257,52.089)
C4: (53.367,135.976,53.108)
P: (50.696,130.275,55.111)
C4': (51.230,133.826,56.688)
C2': (51.096,135.875,55.506)
O2': (51.098,136.799,56.571)
N1: (54.258,137.316,51.085)
N2: (53.537,139.283,52.049)
N3: (53.181,137.314,53.199)
N7: (53.930,133.898,52.364)
N9: (53.035,135.041,54.064)
O5': (50.966,131.821,55.383)
O3': (49.107,134.929,56.585)
OP2: (49.580,129.839,55.988)
C3': (50.277,134.629,55.827)
C1': (52.508,135.299,55.399)
C5': (50.978,132.342,56.716)
O6: (55.083,135.484,50.020)
O4': (52.538,134.087,56.123)
C8: (53.368,133.816,53.536)
C2: (53.647,137.948,52.137)
C6: (54.473,135.945,50.986)
C5: (53.953,135.257,52.089)
C4: (53.367,135.976,53.108)
P: (50.696,130.275,55.111)
C4': (51.230,133.826,56.688)
C2': (51.096,135.875,55.506)
O2': (51.098,136.799,56.571)
N1: (54.258,137.316,51.085)
N2: (53.537,139.283,52.049)
N3: (53.181,137.314,53.199)
N7: (53.930,133.898,52.364)
N9: (53.035,135.041,54.064)
O5': (50.966,131.821,55.383)
O3': (49.107,134.929,56.585)
OP1: (52.981,135.894,59.929)
OP2: (54.649,136.475,58.071)
C3': (50.250,139.464,60.999)
C1': (51.835,141.092,61.628)
C5': (51.770,138.388,59.323)
O4': (52.507,140.083,60.884)
C8: (52.155,142.396,59.471)
O2': (50.550,139.972,63.374)
C6: (50.842,145.579,60.047)
C5: (51.305,144.272,59.966)
C4: (51.156,143.478,61.088)
P: (53.908,136.860,59.302)
C4': (51.636,138.939,60.715)
C2': (50.484,140.514,62.074)
C2: (50.171,145.081,62.202)
N1: (50.257,145.965,61.197)
N3: (50.590,143.824,62.252)
N6: (50.961,146.463,59.057)
N7: (51.927,143.573,58.948)
N9: (51.719,142.269,60.766)
O5': (53.149,138.219,58.991)
O3': (49.377,138.422,61.370)
OP2: (54.649,136.475,58.071)
C3': (50.250,139.464,60.999)
C1': (51.835,141.092,61.628)
C5': (51.770,138.388,59.323)
O4': (52.507,140.083,60.884)
C8: (52.155,142.396,59.471)
O2': (50.550,139.972,63.374)
C6: (50.842,145.579,60.047)
C5: (51.305,144.272,59.966)
C4: (51.156,143.478,61.088)
P: (53.908,136.860,59.302)
C4': (51.636,138.939,60.715)
C2': (50.484,140.514,62.074)
C2: (50.171,145.081,62.202)
N1: (50.257,145.965,61.197)
N3: (50.590,143.824,62.252)
N6: (50.961,146.463,59.057)
N7: (51.927,143.573,58.948)
N9: (51.719,142.269,60.766)
O5': (53.149,138.219,58.991)
O3': (49.377,138.422,61.370)
Image (generated by PyMOL):