Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01900:01852
Extra
PDB:
ATOM 1 O3' A A1899 114.533 118.708 82.966 1.00 50.45 O
ATOM 2 P A A1900 114.506 118.273 81.425 1.00 48.75 P
ATOM 3 OP1 A A1900 115.869 117.999 80.925 1.00 49.32 O
ATOM 4 OP2 A A1900 113.679 119.304 80.754 1.00 47.81 O
ATOM 5 O5' A A1900 113.704 116.901 81.382 1.00 49.30 O
ATOM 6 C5' A A1900 112.926 116.634 80.219 1.00 52.59 C
ATOM 7 C4' A A1900 112.070 115.401 80.350 1.00 51.16 C
ATOM 8 O4' A A1900 112.739 114.202 79.936 1.00 52.47 O
ATOM 9 C3' A A1900 111.357 114.937 81.603 1.00 48.90 C
ATOM 10 O3' A A1900 110.331 115.846 81.992 1.00 47.68 O
ATOM 11 C2' A A1900 110.717 113.667 81.037 1.00 50.28 C
ATOM 12 O2' A A1900 109.641 113.996 80.179 1.00 48.25 O
ATOM 13 C1' A A1900 111.813 113.151 80.092 1.00 51.63 C
ATOM 14 N9 A A1900 112.501 111.917 80.473 1.00 51.84 N
ATOM 15 C8 A A1900 113.772 111.734 80.955 1.00 51.52 C
ATOM 16 N7 A A1900 114.082 110.477 81.155 1.00 52.43 N
ATOM 17 C5 A A1900 112.935 109.787 80.788 1.00 52.17 C
ATOM 18 C6 A A1900 112.618 108.419 80.761 1.00 52.11 C
ATOM 19 N6 A A1900 113.454 107.453 81.136 1.00 53.52 N
ATOM 20 N1 A A1900 111.391 108.070 80.330 1.00 51.89 N
ATOM 21 C2 A A1900 110.542 109.031 79.964 1.00 50.78 C
ATOM 22 N3 A A1900 110.717 110.342 79.951 1.00 51.04 N
ATOM 23 C4 A A1900 111.952 110.660 80.376 1.00 51.64 C
ATOM 24 P C A1901 109.473 115.576 83.330 1.00 47.71 P
ATOM 25 OP1 C A1901 108.593 116.759 83.521 1.00 46.25 O
ATOM 26 OP2 C A1901 110.366 115.142 84.427 1.00 46.55 O
ATOM 27 O5' C A1901 108.539 114.343 82.964 1.00 48.80 O
TER
ATOM 1 O3' C B1851 119.466 103.297 88.361 1.00 59.30 O
ATOM 2 P C B1852 120.025 103.311 86.855 1.00 61.29 P
ATOM 3 OP1 C B1852 120.352 101.908 86.496 1.00 61.61 O
ATOM 4 OP2 C B1852 121.069 104.362 86.733 1.00 60.76 O
ATOM 5 O5' C B1852 118.766 103.744 85.986 1.00 61.62 O
ATOM 6 C5' C B1852 117.598 102.911 85.936 1.00 61.68 C
ATOM 7 C4' C B1852 117.224 102.625 84.505 1.00 61.64 C
ATOM 8 O4' C B1852 116.658 103.817 83.900 1.00 61.38 O
ATOM 9 C3' C B1852 118.367 102.191 83.593 1.00 61.04 C
ATOM 10 O3' C B1852 117.835 101.328 82.600 1.00 62.94 O
ATOM 11 C2' C B1852 118.764 103.501 82.926 1.00 60.74 C
ATOM 12 O2' C B1852 119.398 103.311 81.676 1.00 60.54 O
ATOM 13 C1' C B1852 117.390 104.142 82.740 1.00 60.59 C
ATOM 14 N1 C B1852 117.344 105.602 82.557 1.00 59.62 N
ATOM 15 C2 C B1852 116.388 106.133 81.690 1.00 58.43 C
ATOM 16 O2 C B1852 115.612 105.360 81.098 1.00 56.42 O
ATOM 17 N3 C B1852 116.328 107.470 81.518 1.00 57.91 N
ATOM 18 C4 C B1852 117.170 108.265 82.174 1.00 57.84 C
ATOM 19 N4 C B1852 117.064 109.574 81.987 1.00 59.18 N
ATOM 20 C5 C B1852 118.156 107.753 83.056 1.00 59.28 C
ATOM 21 C6 C B1852 118.208 106.428 83.220 1.00 59.97 C
ATOM 22 P A B1853 118.006 99.744 82.745 1.00 63.59 P
ATOM 23 OP1 A B1853 119.066 99.481 83.755 1.00 64.11 O
ATOM 24 OP2 A B1853 118.139 99.190 81.370 1.00 63.24 O
ATOM 25 O5' A B1853 116.616 99.241 83.336 1.00 62.07 O
TER
ATOM 2 P A A1900 114.506 118.273 81.425 1.00 48.75 P
ATOM 3 OP1 A A1900 115.869 117.999 80.925 1.00 49.32 O
ATOM 4 OP2 A A1900 113.679 119.304 80.754 1.00 47.81 O
ATOM 5 O5' A A1900 113.704 116.901 81.382 1.00 49.30 O
ATOM 6 C5' A A1900 112.926 116.634 80.219 1.00 52.59 C
ATOM 7 C4' A A1900 112.070 115.401 80.350 1.00 51.16 C
ATOM 8 O4' A A1900 112.739 114.202 79.936 1.00 52.47 O
ATOM 9 C3' A A1900 111.357 114.937 81.603 1.00 48.90 C
ATOM 10 O3' A A1900 110.331 115.846 81.992 1.00 47.68 O
ATOM 11 C2' A A1900 110.717 113.667 81.037 1.00 50.28 C
ATOM 12 O2' A A1900 109.641 113.996 80.179 1.00 48.25 O
ATOM 13 C1' A A1900 111.813 113.151 80.092 1.00 51.63 C
ATOM 14 N9 A A1900 112.501 111.917 80.473 1.00 51.84 N
ATOM 15 C8 A A1900 113.772 111.734 80.955 1.00 51.52 C
ATOM 16 N7 A A1900 114.082 110.477 81.155 1.00 52.43 N
ATOM 17 C5 A A1900 112.935 109.787 80.788 1.00 52.17 C
ATOM 18 C6 A A1900 112.618 108.419 80.761 1.00 52.11 C
ATOM 19 N6 A A1900 113.454 107.453 81.136 1.00 53.52 N
ATOM 20 N1 A A1900 111.391 108.070 80.330 1.00 51.89 N
ATOM 21 C2 A A1900 110.542 109.031 79.964 1.00 50.78 C
ATOM 22 N3 A A1900 110.717 110.342 79.951 1.00 51.04 N
ATOM 23 C4 A A1900 111.952 110.660 80.376 1.00 51.64 C
ATOM 24 P C A1901 109.473 115.576 83.330 1.00 47.71 P
ATOM 25 OP1 C A1901 108.593 116.759 83.521 1.00 46.25 O
ATOM 26 OP2 C A1901 110.366 115.142 84.427 1.00 46.55 O
ATOM 27 O5' C A1901 108.539 114.343 82.964 1.00 48.80 O
TER
ATOM 1 O3' C B1851 119.466 103.297 88.361 1.00 59.30 O
ATOM 2 P C B1852 120.025 103.311 86.855 1.00 61.29 P
ATOM 3 OP1 C B1852 120.352 101.908 86.496 1.00 61.61 O
ATOM 4 OP2 C B1852 121.069 104.362 86.733 1.00 60.76 O
ATOM 5 O5' C B1852 118.766 103.744 85.986 1.00 61.62 O
ATOM 6 C5' C B1852 117.598 102.911 85.936 1.00 61.68 C
ATOM 7 C4' C B1852 117.224 102.625 84.505 1.00 61.64 C
ATOM 8 O4' C B1852 116.658 103.817 83.900 1.00 61.38 O
ATOM 9 C3' C B1852 118.367 102.191 83.593 1.00 61.04 C
ATOM 10 O3' C B1852 117.835 101.328 82.600 1.00 62.94 O
ATOM 11 C2' C B1852 118.764 103.501 82.926 1.00 60.74 C
ATOM 12 O2' C B1852 119.398 103.311 81.676 1.00 60.54 O
ATOM 13 C1' C B1852 117.390 104.142 82.740 1.00 60.59 C
ATOM 14 N1 C B1852 117.344 105.602 82.557 1.00 59.62 N
ATOM 15 C2 C B1852 116.388 106.133 81.690 1.00 58.43 C
ATOM 16 O2 C B1852 115.612 105.360 81.098 1.00 56.42 O
ATOM 17 N3 C B1852 116.328 107.470 81.518 1.00 57.91 N
ATOM 18 C4 C B1852 117.170 108.265 82.174 1.00 57.84 C
ATOM 19 N4 C B1852 117.064 109.574 81.987 1.00 59.18 N
ATOM 20 C5 C B1852 118.156 107.753 83.056 1.00 59.28 C
ATOM 21 C6 C B1852 118.208 106.428 83.220 1.00 59.97 C
ATOM 22 P A B1853 118.006 99.744 82.745 1.00 63.59 P
ATOM 23 OP1 A B1853 119.066 99.481 83.755 1.00 64.11 O
ATOM 24 OP2 A B1853 118.139 99.190 81.370 1.00 63.24 O
ATOM 25 O5' A B1853 116.616 99.241 83.336 1.00 62.07 O
TER
Atoms:
OP1: (115.869,117.999,80.925)
OP2: (113.679,119.304,80.754)
C3': (111.357,114.937,81.603)
C1': (111.813,113.151,80.092)
C5': (112.926,116.634,80.219)
O4': (112.739,114.202,79.936)
C8: (113.772,111.734,80.955)
O2': (109.641,113.996,80.179)
C6: (112.618,108.419,80.761)
C5: (112.935,109.787,80.788)
C4: (111.952,110.660,80.376)
P: (114.506,118.273,81.425)
C4': (112.070,115.401,80.350)
C2': (110.717,113.667,81.037)
C2: (110.542,109.031,79.964)
N1: (111.391,108.070,80.330)
N3: (110.717,110.342,79.951)
N6: (113.454,107.453,81.136)
N7: (114.082,110.477,81.155)
N9: (112.501,111.917,80.473)
O5': (113.704,116.901,81.382)
O3': (110.331,115.846,81.992)
OP2: (113.679,119.304,80.754)
C3': (111.357,114.937,81.603)
C1': (111.813,113.151,80.092)
C5': (112.926,116.634,80.219)
O4': (112.739,114.202,79.936)
C8: (113.772,111.734,80.955)
O2': (109.641,113.996,80.179)
C6: (112.618,108.419,80.761)
C5: (112.935,109.787,80.788)
C4: (111.952,110.660,80.376)
P: (114.506,118.273,81.425)
C4': (112.070,115.401,80.350)
C2': (110.717,113.667,81.037)
C2: (110.542,109.031,79.964)
N1: (111.391,108.070,80.330)
N3: (110.717,110.342,79.951)
N6: (113.454,107.453,81.136)
N7: (114.082,110.477,81.155)
N9: (112.501,111.917,80.473)
O5': (113.704,116.901,81.382)
O3': (110.331,115.846,81.992)
C2: (116.388,106.133,81.690)
OP1: (120.352,101.908,86.496)
OP2: (121.069,104.362,86.733)
C4: (117.170,108.265,82.174)
O5': (118.766,103.744,85.986)
C3': (118.367,102.191,83.593)
C1': (117.390,104.142,82.740)
O4': (116.658,103.817,83.900)
C5': (117.598,102.911,85.936)
P: (120.025,103.311,86.855)
O2: (115.612,105.360,81.098)
C4': (117.224,102.625,84.505)
C2': (118.764,103.501,82.926)
O2': (119.398,103.311,81.676)
N1: (117.344,105.602,82.557)
N3: (116.328,107.470,81.518)
N4: (117.064,109.574,81.987)
C6: (118.208,106.428,83.220)
C5: (118.156,107.753,83.056)
O3': (117.835,101.328,82.600)
OP1: (120.352,101.908,86.496)
OP2: (121.069,104.362,86.733)
C4: (117.170,108.265,82.174)
O5': (118.766,103.744,85.986)
C3': (118.367,102.191,83.593)
C1': (117.390,104.142,82.740)
O4': (116.658,103.817,83.900)
C5': (117.598,102.911,85.936)
P: (120.025,103.311,86.855)
O2: (115.612,105.360,81.098)
C4': (117.224,102.625,84.505)
C2': (118.764,103.501,82.926)
O2': (119.398,103.311,81.676)
N1: (117.344,105.602,82.557)
N3: (116.328,107.470,81.518)
N4: (117.064,109.574,81.987)
C6: (118.208,106.428,83.220)
C5: (118.156,107.753,83.056)
O3': (117.835,101.328,82.600)
Image (generated by PyMOL):