ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OXM:A63:A38

Extra

PDB:
ATOM 1 O3' A A 62 -14.439 -42.313 7.170 1.00 58.06 O
ATOM 2 P A A 63 -13.076 -43.054 7.565 1.00 56.89 P
ATOM 3 OP1 A A 63 -12.099 -42.813 6.479 1.00 57.36 O
ATOM 4 OP2 A A 63 -13.377 -44.444 7.986 1.00 56.15 O
ATOM 5 O5' A A 63 -12.643 -42.225 8.864 1.00 55.52 O
ATOM 6 C5' A A 63 -12.347 -40.832 8.778 1.00 55.02 C
ATOM 7 C4' A A 63 -12.347 -40.195 10.153 1.00 53.99 C
ATOM 8 O4' A A 63 -13.645 -40.378 10.770 1.00 53.39 O
ATOM 9 C3' A A 63 -11.394 -40.810 11.164 1.00 53.69 C
ATOM 10 O3' A A 63 -10.073 -40.321 11.008 1.00 54.59 O
ATOM 11 C2' A A 63 -12.027 -40.355 12.475 1.00 52.59 C
ATOM 12 O2' A A 63 -11.838 -38.981 12.750 1.00 53.17 O
ATOM 13 C1' A A 63 -13.492 -40.597 12.162 1.00 51.86 C
ATOM 14 N9 A A 63 -13.935 -41.941 12.521 1.00 50.51 N
ATOM 15 C8 A A 63 -13.943 -43.060 11.734 1.00 50.93 C
ATOM 16 N7 A A 63 -14.402 -44.131 12.333 1.00 50.60 N
ATOM 17 C5 A A 63 -14.717 -43.685 13.606 1.00 49.49 C
ATOM 18 C6 A A 63 -15.254 -44.333 14.739 1.00 48.53 C
ATOM 19 N6 A A 63 -15.576 -45.628 14.768 1.00 48.35 N
ATOM 20 N1 A A 63 -15.444 -43.594 15.852 1.00 47.91 N
ATOM 21 C2 A A 63 -15.123 -42.293 15.837 1.00 47.87 C
ATOM 22 N3 A A 63 -14.616 -41.578 14.833 1.00 48.41 N
ATOM 23 C4 A A 63 -14.435 -42.337 13.738 1.00 49.31 C
ATOM 24 P A A 64 -8.832 -41.326 11.106 1.00 55.51 P
ATOM 25 OP1 A A 64 -8.155 -41.310 9.792 1.00 56.94 O
ATOM 26 OP2 A A 64 -9.275 -42.625 11.668 1.00 54.93 O
ATOM 27 O5' A A 64 -7.879 -40.547 12.131 1.00 55.33 O
TER

ATOM 1 O3' G B 37 -16.261 -53.733 9.597 1.00 67.80 O
ATOM 2 P C B 38 -17.462 -54.630 10.151 1.00 68.53 P
ATOM 3 OP1 C B 38 -16.906 -55.804 10.868 1.00 69.45 O
ATOM 4 OP2 C B 38 -18.393 -54.829 9.018 1.00 70.05 O
ATOM 5 O5' C B 38 -18.190 -53.654 11.186 1.00 66.20 O
ATOM 6 C5' C B 38 -18.491 -54.079 12.513 1.00 64.79 C
ATOM 7 C4' C B 38 -18.752 -52.867 13.388 1.00 62.87 C
ATOM 8 O4' C B 38 -17.656 -51.919 13.261 1.00 61.95 O
ATOM 9 C3' C B 38 -20.029 -52.095 13.047 1.00 62.36 C
ATOM 10 O3' C B 38 -20.736 -51.815 14.246 1.00 61.58 O
ATOM 11 C2' C B 38 -19.500 -50.826 12.381 1.00 61.59 C
ATOM 12 O2' C B 38 -20.343 -49.700 12.512 1.00 60.53 O
ATOM 13 C1' C B 38 -18.217 -50.628 13.179 1.00 60.70 C
ATOM 14 N1 C B 38 -17.277 -49.635 12.565 1.00 59.95 N
ATOM 15 C2 C B 38 -16.898 -48.508 13.314 1.00 58.80 C
ATOM 16 O2 C B 38 -17.331 -48.363 14.469 1.00 58.14 O
ATOM 17 N3 C B 38 -16.057 -47.601 12.746 1.00 58.28 N
ATOM 18 C4 C B 38 -15.609 -47.780 11.500 1.00 58.63 C
ATOM 19 N4 C B 38 -14.789 -46.854 10.997 1.00 58.22 N
ATOM 20 C5 C B 38 -15.986 -48.916 10.720 1.00 60.01 C
ATOM 21 C6 C B 38 -16.814 -49.806 11.287 1.00 60.53 C
ATOM 22 P A B 39 -22.332 -51.776 14.310 1.00 61.82 P
ATOM 23 OP1 A B 39 -22.762 -52.830 15.258 1.00 61.90 O
ATOM 24 OP2 A B 39 -22.895 -51.719 12.939 1.00 62.69 O
ATOM 25 O5' A B 39 -22.581 -50.340 14.956 1.00 60.03 O
TER

Atoms:
OP1: (-12.099,-42.813,6.479)
OP2: (-13.377,-44.444,7.986)
C3': (-11.394,-40.810,11.164)
C1': (-13.492,-40.597,12.162)
C5': (-12.347,-40.832,8.778)
O4': (-13.645,-40.378,10.770)
C8: (-13.943,-43.060,11.734)
O2': (-11.838,-38.981,12.750)
C6: (-15.254,-44.333,14.739)
C5: (-14.717,-43.685,13.606)
C4: (-14.435,-42.337,13.738)
P: (-13.076,-43.054,7.565)
C4': (-12.347,-40.195,10.153)
C2': (-12.027,-40.355,12.475)
C2: (-15.123,-42.293,15.837)
N1: (-15.444,-43.594,15.852)
N3: (-14.616,-41.578,14.833)
N6: (-15.576,-45.628,14.768)
N7: (-14.402,-44.131,12.333)
N9: (-13.935,-41.941,12.521)
O5': (-12.643,-42.225,8.864)
O3': (-10.073,-40.321,11.008)
C2: (-16.898,-48.508,13.314)
OP1: (-16.906,-55.804,10.868)
OP2: (-18.393,-54.829,9.018)
C4: (-15.609,-47.780,11.500)
O5': (-18.190,-53.654,11.186)
C3': (-20.029,-52.095,13.047)
C1': (-18.217,-50.628,13.179)
O4': (-17.656,-51.919,13.261)
C5': (-18.491,-54.079,12.513)
P: (-17.462,-54.630,10.151)
O2: (-17.331,-48.363,14.469)
C4': (-18.752,-52.867,13.388)
C2': (-19.500,-50.826,12.381)
O2': (-20.343,-49.700,12.512)
N1: (-17.277,-49.635,12.565)
N3: (-16.057,-47.601,12.746)
N4: (-14.789,-46.854,10.997)
C6: (-16.814,-49.806,11.287)
C5: (-15.986,-48.916,10.720)
O3': (-20.736,-51.815,14.246)
Image (generated by PyMOL):
PyMOL image
show in jmol