Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1589:1585
Extra
PDB:
ATOM 1 O3' G A 588 49.274 -6.936 49.984 1.00 35.14 O
ATOM 2 P A A 589 50.238 -6.214 51.059 1.00 35.58 P
ATOM 3 OP1 A A 589 51.498 -5.881 50.329 1.00 35.68 O
ATOM 4 OP2 A A 589 50.310 -7.108 52.255 1.00 35.48 O
ATOM 5 O5' A A 589 49.478 -4.869 51.429 1.00 35.55 O
ATOM 6 C5' A A 589 49.507 -3.783 50.536 1.00 35.65 C
ATOM 7 C4' A A 589 49.646 -2.458 51.236 1.00 35.63 C
ATOM 8 O4' A A 589 48.467 -2.207 52.025 1.00 35.55 O
ATOM 9 C3' A A 589 50.852 -2.260 52.162 1.00 35.59 C
ATOM 10 O3' A A 589 51.408 -0.974 51.911 1.00 35.67 O
ATOM 11 C2' A A 589 50.224 -2.231 53.548 1.00 35.47 C
ATOM 12 O2' A A 589 50.908 -1.408 54.443 1.00 35.46 O
ATOM 13 C1' A A 589 48.832 -1.669 53.261 1.00 35.48 C
ATOM 14 N9 A A 589 47.806 -2.048 54.230 1.00 35.39 N
ATOM 15 C8 A A 589 48.060 -2.902 55.231 1.00 35.30 C
ATOM 16 N7 A A 589 47.050 -3.093 56.005 1.00 35.24 N
ATOM 17 C5 A A 589 46.017 -2.341 55.450 1.00 35.29 C
ATOM 18 C6 A A 589 44.676 -2.163 55.853 1.00 35.27 C
ATOM 19 N6 A A 589 44.309 -2.840 56.927 1.00 35.19 N
ATOM 20 N1 A A 589 43.792 -1.368 55.184 1.00 35.34 N
ATOM 21 C2 A A 589 44.358 -0.768 54.152 1.00 35.43 C
ATOM 22 N3 A A 589 45.634 -0.853 53.680 1.00 35.46 N
ATOM 23 C4 A A 589 46.462 -1.685 54.353 1.00 35.38 C
ATOM 24 P A A 590 52.895 -0.791 51.280 1.00 32.74 P
ATOM 25 OP1 A A 590 52.927 -1.542 49.970 1.00 32.82 O
ATOM 26 OP2 A A 590 53.921 -1.131 52.394 1.00 32.68 O
ATOM 27 O5' A A 590 52.984 0.767 51.025 1.00 32.84 O
TER
ATOM 1 O3' U B 584 53.132 -8.346 63.174 1.00 38.16 O
ATOM 2 P C B 585 53.160 -9.704 62.382 1.00 35.32 P
ATOM 3 OP1 C B 585 53.587 -10.714 63.342 1.00 35.34 O
ATOM 4 OP2 C B 585 53.954 -9.509 61.168 1.00 35.37 O
ATOM 5 O5' C B 585 51.657 -9.943 62.003 1.00 35.26 O
ATOM 6 C5' C B 585 50.744 -10.421 62.968 1.00 35.22 C
ATOM 7 C4' C B 585 49.302 -10.084 62.603 1.00 35.18 C
ATOM 8 O4' C B 585 49.179 -8.672 62.386 1.00 35.16 O
ATOM 9 C3' C B 585 48.767 -10.657 61.309 1.00 35.19 C
ATOM 10 O3' C B 585 48.427 -12.029 61.364 1.00 35.21 O
ATOM 11 C2' C B 585 47.600 -9.754 61.039 1.00 35.16 C
ATOM 12 O2' C B 585 46.526 -10.109 61.833 1.00 35.13 O
ATOM 13 C1' C B 585 48.114 -8.427 61.535 1.00 35.15 C
ATOM 14 N1 C B 585 48.542 -7.609 60.416 1.00 35.19 N
ATOM 15 C2 C B 585 47.635 -6.598 60.235 1.00 35.18 C
ATOM 16 O2 C B 585 46.767 -6.503 61.116 1.00 35.15 O
ATOM 17 N3 C B 585 47.740 -5.769 59.209 1.00 35.23 N
ATOM 18 C4 C B 585 48.684 -6.017 58.353 1.00 35.27 C
ATOM 19 N4 C B 585 48.717 -5.161 57.369 1.00 35.33 N
ATOM 20 C5 C B 585 49.620 -7.071 58.443 1.00 35.28 C
ATOM 21 C6 C B 585 49.520 -7.866 59.504 1.00 35.24 C
ATOM 22 P U B 586 48.591 -12.884 60.046 1.00 33.48 P
ATOM 23 OP1 U B 586 48.033 -14.231 60.248 1.00 33.51 O
ATOM 24 OP2 U B 586 49.975 -12.760 59.622 1.00 33.53 O
ATOM 25 O5' U B 586 47.687 -12.107 59.069 1.00 33.48 O
TER
ATOM 2 P A A 589 50.238 -6.214 51.059 1.00 35.58 P
ATOM 3 OP1 A A 589 51.498 -5.881 50.329 1.00 35.68 O
ATOM 4 OP2 A A 589 50.310 -7.108 52.255 1.00 35.48 O
ATOM 5 O5' A A 589 49.478 -4.869 51.429 1.00 35.55 O
ATOM 6 C5' A A 589 49.507 -3.783 50.536 1.00 35.65 C
ATOM 7 C4' A A 589 49.646 -2.458 51.236 1.00 35.63 C
ATOM 8 O4' A A 589 48.467 -2.207 52.025 1.00 35.55 O
ATOM 9 C3' A A 589 50.852 -2.260 52.162 1.00 35.59 C
ATOM 10 O3' A A 589 51.408 -0.974 51.911 1.00 35.67 O
ATOM 11 C2' A A 589 50.224 -2.231 53.548 1.00 35.47 C
ATOM 12 O2' A A 589 50.908 -1.408 54.443 1.00 35.46 O
ATOM 13 C1' A A 589 48.832 -1.669 53.261 1.00 35.48 C
ATOM 14 N9 A A 589 47.806 -2.048 54.230 1.00 35.39 N
ATOM 15 C8 A A 589 48.060 -2.902 55.231 1.00 35.30 C
ATOM 16 N7 A A 589 47.050 -3.093 56.005 1.00 35.24 N
ATOM 17 C5 A A 589 46.017 -2.341 55.450 1.00 35.29 C
ATOM 18 C6 A A 589 44.676 -2.163 55.853 1.00 35.27 C
ATOM 19 N6 A A 589 44.309 -2.840 56.927 1.00 35.19 N
ATOM 20 N1 A A 589 43.792 -1.368 55.184 1.00 35.34 N
ATOM 21 C2 A A 589 44.358 -0.768 54.152 1.00 35.43 C
ATOM 22 N3 A A 589 45.634 -0.853 53.680 1.00 35.46 N
ATOM 23 C4 A A 589 46.462 -1.685 54.353 1.00 35.38 C
ATOM 24 P A A 590 52.895 -0.791 51.280 1.00 32.74 P
ATOM 25 OP1 A A 590 52.927 -1.542 49.970 1.00 32.82 O
ATOM 26 OP2 A A 590 53.921 -1.131 52.394 1.00 32.68 O
ATOM 27 O5' A A 590 52.984 0.767 51.025 1.00 32.84 O
TER
ATOM 1 O3' U B 584 53.132 -8.346 63.174 1.00 38.16 O
ATOM 2 P C B 585 53.160 -9.704 62.382 1.00 35.32 P
ATOM 3 OP1 C B 585 53.587 -10.714 63.342 1.00 35.34 O
ATOM 4 OP2 C B 585 53.954 -9.509 61.168 1.00 35.37 O
ATOM 5 O5' C B 585 51.657 -9.943 62.003 1.00 35.26 O
ATOM 6 C5' C B 585 50.744 -10.421 62.968 1.00 35.22 C
ATOM 7 C4' C B 585 49.302 -10.084 62.603 1.00 35.18 C
ATOM 8 O4' C B 585 49.179 -8.672 62.386 1.00 35.16 O
ATOM 9 C3' C B 585 48.767 -10.657 61.309 1.00 35.19 C
ATOM 10 O3' C B 585 48.427 -12.029 61.364 1.00 35.21 O
ATOM 11 C2' C B 585 47.600 -9.754 61.039 1.00 35.16 C
ATOM 12 O2' C B 585 46.526 -10.109 61.833 1.00 35.13 O
ATOM 13 C1' C B 585 48.114 -8.427 61.535 1.00 35.15 C
ATOM 14 N1 C B 585 48.542 -7.609 60.416 1.00 35.19 N
ATOM 15 C2 C B 585 47.635 -6.598 60.235 1.00 35.18 C
ATOM 16 O2 C B 585 46.767 -6.503 61.116 1.00 35.15 O
ATOM 17 N3 C B 585 47.740 -5.769 59.209 1.00 35.23 N
ATOM 18 C4 C B 585 48.684 -6.017 58.353 1.00 35.27 C
ATOM 19 N4 C B 585 48.717 -5.161 57.369 1.00 35.33 N
ATOM 20 C5 C B 585 49.620 -7.071 58.443 1.00 35.28 C
ATOM 21 C6 C B 585 49.520 -7.866 59.504 1.00 35.24 C
ATOM 22 P U B 586 48.591 -12.884 60.046 1.00 33.48 P
ATOM 23 OP1 U B 586 48.033 -14.231 60.248 1.00 33.51 O
ATOM 24 OP2 U B 586 49.975 -12.760 59.622 1.00 33.53 O
ATOM 25 O5' U B 586 47.687 -12.107 59.069 1.00 33.48 O
TER
Atoms:
OP1: (51.498,-5.881,50.329)
OP2: (50.310,-7.108,52.255)
C3': (50.852,-2.260,52.162)
C1': (48.832,-1.669,53.261)
C5': (49.507,-3.783,50.536)
O4': (48.467,-2.207,52.025)
C8: (48.060,-2.902,55.231)
O2': (50.908,-1.408,54.443)
C6: (44.676,-2.163,55.853)
C5: (46.017,-2.341,55.450)
C4: (46.462,-1.685,54.353)
P: (50.238,-6.214,51.059)
C4': (49.646,-2.458,51.236)
C2': (50.224,-2.231,53.548)
C2: (44.358,-0.768,54.152)
N1: (43.792,-1.368,55.184)
N3: (45.634,-0.853,53.680)
N6: (44.309,-2.840,56.927)
N7: (47.050,-3.093,56.005)
N9: (47.806,-2.048,54.230)
O5': (49.478,-4.869,51.429)
O3': (51.408,-0.974,51.911)
OP2: (50.310,-7.108,52.255)
C3': (50.852,-2.260,52.162)
C1': (48.832,-1.669,53.261)
C5': (49.507,-3.783,50.536)
O4': (48.467,-2.207,52.025)
C8: (48.060,-2.902,55.231)
O2': (50.908,-1.408,54.443)
C6: (44.676,-2.163,55.853)
C5: (46.017,-2.341,55.450)
C4: (46.462,-1.685,54.353)
P: (50.238,-6.214,51.059)
C4': (49.646,-2.458,51.236)
C2': (50.224,-2.231,53.548)
C2: (44.358,-0.768,54.152)
N1: (43.792,-1.368,55.184)
N3: (45.634,-0.853,53.680)
N6: (44.309,-2.840,56.927)
N7: (47.050,-3.093,56.005)
N9: (47.806,-2.048,54.230)
O5': (49.478,-4.869,51.429)
O3': (51.408,-0.974,51.911)
C2: (47.635,-6.598,60.235)
OP1: (53.587,-10.714,63.342)
OP2: (53.954,-9.509,61.168)
C4: (48.684,-6.017,58.353)
O5': (51.657,-9.943,62.003)
C3': (48.767,-10.657,61.309)
C1': (48.114,-8.427,61.535)
O4': (49.179,-8.672,62.386)
C5': (50.744,-10.421,62.968)
P: (53.160,-9.704,62.382)
O2: (46.767,-6.503,61.116)
C4': (49.302,-10.084,62.603)
C2': (47.600,-9.754,61.039)
O2': (46.526,-10.109,61.833)
N1: (48.542,-7.609,60.416)
N3: (47.740,-5.769,59.209)
N4: (48.717,-5.161,57.369)
C6: (49.520,-7.866,59.504)
C5: (49.620,-7.071,58.443)
O3': (48.427,-12.029,61.364)
OP1: (53.587,-10.714,63.342)
OP2: (53.954,-9.509,61.168)
C4: (48.684,-6.017,58.353)
O5': (51.657,-9.943,62.003)
C3': (48.767,-10.657,61.309)
C1': (48.114,-8.427,61.535)
O4': (49.179,-8.672,62.386)
C5': (50.744,-10.421,62.968)
P: (53.160,-9.704,62.382)
O2: (46.767,-6.503,61.116)
C4': (49.302,-10.084,62.603)
C2': (47.600,-9.754,61.039)
O2': (46.526,-10.109,61.833)
N1: (48.542,-7.609,60.416)
N3: (47.740,-5.769,59.209)
N4: (48.717,-5.161,57.369)
C6: (49.520,-7.866,59.504)
C5: (49.620,-7.071,58.443)
O3': (48.427,-12.029,61.364)
Image (generated by PyMOL):