Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2400:2393
Extra
PDB:
ATOM 1 O3' A A 399 -40.551 66.880 66.066 1.00 62.22 O
ATOM 2 P A A 400 -40.792 65.680 65.038 1.00 55.41 P
ATOM 3 OP1 A A 400 -41.626 64.646 65.682 1.00 55.12 O
ATOM 4 OP2 A A 400 -39.469 65.298 64.590 1.00 55.03 O
ATOM 5 O5' A A 400 -41.621 66.399 63.895 1.00 56.19 O
ATOM 6 C5' A A 400 -42.878 67.014 64.200 1.00 56.72 C
ATOM 7 C4' A A 400 -43.631 67.416 62.948 1.00 57.43 C
ATOM 8 O4' A A 400 -43.542 68.860 62.764 1.00 58.04 O
ATOM 9 C3' A A 400 -43.117 66.786 61.644 1.00 57.38 C
ATOM 10 O3' A A 400 -44.197 66.511 60.762 1.00 57.87 O
ATOM 11 C2' A A 400 -42.299 67.909 61.036 1.00 57.75 C
ATOM 12 O2' A A 400 -42.174 67.839 59.640 1.00 58.10 O
ATOM 13 C1' A A 400 -43.106 69.125 61.450 1.00 58.37 C
ATOM 14 N9 A A 400 -42.328 70.353 61.441 1.00 58.66 N
ATOM 15 C8 A A 400 -41.553 70.855 62.426 1.00 58.37 C
ATOM 16 N7 A A 400 -40.950 71.954 62.089 1.00 58.77 N
ATOM 17 C5 A A 400 -41.351 72.166 60.800 1.00 59.35 C
ATOM 18 C6 A A 400 -41.030 73.189 59.907 1.00 59.99 C
ATOM 19 N6 A A 400 -40.191 74.170 60.264 1.00 60.10 N
ATOM 20 N1 A A 400 -41.580 73.129 58.666 1.00 60.52 N
ATOM 21 C2 A A 400 -42.390 72.097 58.393 1.00 60.38 C
ATOM 22 N3 A A 400 -42.769 71.080 59.163 1.00 59.80 N
ATOM 23 C4 A A 400 -42.201 71.184 60.371 1.00 59.29 C
ATOM 24 P C A 401 -45.152 65.232 60.922 1.00 69.28 P
ATOM 25 OP1 C A 401 -46.524 65.753 60.828 1.00 69.97 O
ATOM 26 OP2 C A 401 -44.779 64.470 62.157 1.00 68.52 O
ATOM 27 O5' C A 401 -44.839 64.413 59.598 1.00 69.27 O
TER
ATOM 1 O3' C B 392 -33.032 74.988 67.878 1.00 63.46 O
ATOM 2 P C B 393 -34.016 76.241 67.883 1.00 61.27 P
ATOM 3 OP1 C B 393 -33.297 77.335 68.570 1.00 61.55 O
ATOM 4 OP2 C B 393 -35.300 75.790 68.434 1.00 61.21 O
ATOM 5 O5' C B 393 -34.159 76.592 66.345 1.00 61.77 O
ATOM 6 C5' C B 393 -33.134 77.296 65.652 1.00 62.07 C
ATOM 7 C4' C B 393 -33.562 77.607 64.241 1.00 62.63 C
ATOM 8 O4' C B 393 -33.964 76.385 63.580 1.00 62.26 O
ATOM 9 C3' C B 393 -34.777 78.479 64.120 1.00 63.35 C
ATOM 10 O3' C B 393 -34.482 79.837 64.255 1.00 63.96 O
ATOM 11 C2' C B 393 -35.334 78.112 62.756 1.00 63.62 C
ATOM 12 O2' C B 393 -34.591 78.747 61.739 1.00 64.06 O
ATOM 13 C1' C B 393 -35.029 76.629 62.695 1.00 62.82 C
ATOM 14 N1 C B 393 -36.186 75.772 63.082 1.00 62.56 N
ATOM 15 C2 C B 393 -37.216 75.436 62.155 1.00 62.88 C
ATOM 16 O2 C B 393 -37.180 75.892 60.988 1.00 63.42 O
ATOM 17 N3 C B 393 -38.262 74.631 62.541 1.00 62.65 N
ATOM 18 C4 C B 393 -38.272 74.141 63.788 1.00 62.10 C
ATOM 19 N4 C B 393 -39.271 73.340 64.161 1.00 61.89 N
ATOM 20 C5 C B 393 -37.231 74.450 64.731 1.00 61.77 C
ATOM 21 C6 C B 393 -36.231 75.255 64.343 1.00 62.01 C
ATOM 22 P U B 394 -35.602 80.822 64.820 1.00 66.79 P
ATOM 23 OP1 U B 394 -35.059 82.192 64.705 1.00 67.46 O
ATOM 24 OP2 U B 394 -36.000 80.312 66.158 1.00 66.31 O
ATOM 25 O5' U B 394 -36.808 80.632 63.788 1.00 67.22 O
TER
ATOM 2 P A A 400 -40.792 65.680 65.038 1.00 55.41 P
ATOM 3 OP1 A A 400 -41.626 64.646 65.682 1.00 55.12 O
ATOM 4 OP2 A A 400 -39.469 65.298 64.590 1.00 55.03 O
ATOM 5 O5' A A 400 -41.621 66.399 63.895 1.00 56.19 O
ATOM 6 C5' A A 400 -42.878 67.014 64.200 1.00 56.72 C
ATOM 7 C4' A A 400 -43.631 67.416 62.948 1.00 57.43 C
ATOM 8 O4' A A 400 -43.542 68.860 62.764 1.00 58.04 O
ATOM 9 C3' A A 400 -43.117 66.786 61.644 1.00 57.38 C
ATOM 10 O3' A A 400 -44.197 66.511 60.762 1.00 57.87 O
ATOM 11 C2' A A 400 -42.299 67.909 61.036 1.00 57.75 C
ATOM 12 O2' A A 400 -42.174 67.839 59.640 1.00 58.10 O
ATOM 13 C1' A A 400 -43.106 69.125 61.450 1.00 58.37 C
ATOM 14 N9 A A 400 -42.328 70.353 61.441 1.00 58.66 N
ATOM 15 C8 A A 400 -41.553 70.855 62.426 1.00 58.37 C
ATOM 16 N7 A A 400 -40.950 71.954 62.089 1.00 58.77 N
ATOM 17 C5 A A 400 -41.351 72.166 60.800 1.00 59.35 C
ATOM 18 C6 A A 400 -41.030 73.189 59.907 1.00 59.99 C
ATOM 19 N6 A A 400 -40.191 74.170 60.264 1.00 60.10 N
ATOM 20 N1 A A 400 -41.580 73.129 58.666 1.00 60.52 N
ATOM 21 C2 A A 400 -42.390 72.097 58.393 1.00 60.38 C
ATOM 22 N3 A A 400 -42.769 71.080 59.163 1.00 59.80 N
ATOM 23 C4 A A 400 -42.201 71.184 60.371 1.00 59.29 C
ATOM 24 P C A 401 -45.152 65.232 60.922 1.00 69.28 P
ATOM 25 OP1 C A 401 -46.524 65.753 60.828 1.00 69.97 O
ATOM 26 OP2 C A 401 -44.779 64.470 62.157 1.00 68.52 O
ATOM 27 O5' C A 401 -44.839 64.413 59.598 1.00 69.27 O
TER
ATOM 1 O3' C B 392 -33.032 74.988 67.878 1.00 63.46 O
ATOM 2 P C B 393 -34.016 76.241 67.883 1.00 61.27 P
ATOM 3 OP1 C B 393 -33.297 77.335 68.570 1.00 61.55 O
ATOM 4 OP2 C B 393 -35.300 75.790 68.434 1.00 61.21 O
ATOM 5 O5' C B 393 -34.159 76.592 66.345 1.00 61.77 O
ATOM 6 C5' C B 393 -33.134 77.296 65.652 1.00 62.07 C
ATOM 7 C4' C B 393 -33.562 77.607 64.241 1.00 62.63 C
ATOM 8 O4' C B 393 -33.964 76.385 63.580 1.00 62.26 O
ATOM 9 C3' C B 393 -34.777 78.479 64.120 1.00 63.35 C
ATOM 10 O3' C B 393 -34.482 79.837 64.255 1.00 63.96 O
ATOM 11 C2' C B 393 -35.334 78.112 62.756 1.00 63.62 C
ATOM 12 O2' C B 393 -34.591 78.747 61.739 1.00 64.06 O
ATOM 13 C1' C B 393 -35.029 76.629 62.695 1.00 62.82 C
ATOM 14 N1 C B 393 -36.186 75.772 63.082 1.00 62.56 N
ATOM 15 C2 C B 393 -37.216 75.436 62.155 1.00 62.88 C
ATOM 16 O2 C B 393 -37.180 75.892 60.988 1.00 63.42 O
ATOM 17 N3 C B 393 -38.262 74.631 62.541 1.00 62.65 N
ATOM 18 C4 C B 393 -38.272 74.141 63.788 1.00 62.10 C
ATOM 19 N4 C B 393 -39.271 73.340 64.161 1.00 61.89 N
ATOM 20 C5 C B 393 -37.231 74.450 64.731 1.00 61.77 C
ATOM 21 C6 C B 393 -36.231 75.255 64.343 1.00 62.01 C
ATOM 22 P U B 394 -35.602 80.822 64.820 1.00 66.79 P
ATOM 23 OP1 U B 394 -35.059 82.192 64.705 1.00 67.46 O
ATOM 24 OP2 U B 394 -36.000 80.312 66.158 1.00 66.31 O
ATOM 25 O5' U B 394 -36.808 80.632 63.788 1.00 67.22 O
TER
Atoms:
OP1: (-41.626,64.646,65.682)
OP2: (-39.469,65.298,64.590)
C3': (-43.117,66.786,61.644)
C1': (-43.106,69.125,61.450)
C5': (-42.878,67.014,64.200)
O4': (-43.542,68.860,62.764)
C8: (-41.553,70.855,62.426)
O2': (-42.174,67.839,59.640)
C6: (-41.030,73.189,59.907)
C5: (-41.351,72.166,60.800)
C4: (-42.201,71.184,60.371)
P: (-40.792,65.680,65.038)
C4': (-43.631,67.416,62.948)
C2': (-42.299,67.909,61.036)
C2: (-42.390,72.097,58.393)
N1: (-41.580,73.129,58.666)
N3: (-42.769,71.080,59.163)
N6: (-40.191,74.170,60.264)
N7: (-40.950,71.954,62.089)
N9: (-42.328,70.353,61.441)
O5': (-41.621,66.399,63.895)
O3': (-44.197,66.511,60.762)
OP2: (-39.469,65.298,64.590)
C3': (-43.117,66.786,61.644)
C1': (-43.106,69.125,61.450)
C5': (-42.878,67.014,64.200)
O4': (-43.542,68.860,62.764)
C8: (-41.553,70.855,62.426)
O2': (-42.174,67.839,59.640)
C6: (-41.030,73.189,59.907)
C5: (-41.351,72.166,60.800)
C4: (-42.201,71.184,60.371)
P: (-40.792,65.680,65.038)
C4': (-43.631,67.416,62.948)
C2': (-42.299,67.909,61.036)
C2: (-42.390,72.097,58.393)
N1: (-41.580,73.129,58.666)
N3: (-42.769,71.080,59.163)
N6: (-40.191,74.170,60.264)
N7: (-40.950,71.954,62.089)
N9: (-42.328,70.353,61.441)
O5': (-41.621,66.399,63.895)
O3': (-44.197,66.511,60.762)
C2: (-37.216,75.436,62.155)
OP1: (-33.297,77.335,68.570)
OP2: (-35.300,75.790,68.434)
C4: (-38.272,74.141,63.788)
O5': (-34.159,76.592,66.345)
C3': (-34.777,78.479,64.120)
C1': (-35.029,76.629,62.695)
O4': (-33.964,76.385,63.580)
C5': (-33.134,77.296,65.652)
P: (-34.016,76.241,67.883)
O2: (-37.180,75.892,60.988)
C4': (-33.562,77.607,64.241)
C2': (-35.334,78.112,62.756)
O2': (-34.591,78.747,61.739)
N1: (-36.186,75.772,63.082)
N3: (-38.262,74.631,62.541)
N4: (-39.271,73.340,64.161)
C6: (-36.231,75.255,64.343)
C5: (-37.231,74.450,64.731)
O3': (-34.482,79.837,64.255)
OP1: (-33.297,77.335,68.570)
OP2: (-35.300,75.790,68.434)
C4: (-38.272,74.141,63.788)
O5': (-34.159,76.592,66.345)
C3': (-34.777,78.479,64.120)
C1': (-35.029,76.629,62.695)
O4': (-33.964,76.385,63.580)
C5': (-33.134,77.296,65.652)
P: (-34.016,76.241,67.883)
O2: (-37.180,75.892,60.988)
C4': (-33.562,77.607,64.241)
C2': (-35.334,78.112,62.756)
O2': (-34.591,78.747,61.739)
N1: (-36.186,75.772,63.082)
N3: (-38.262,74.631,62.541)
N4: (-39.271,73.340,64.161)
C6: (-36.231,75.255,64.343)
C5: (-37.231,74.450,64.731)
O3': (-34.482,79.837,64.255)
Image (generated by PyMOL):