Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DK1:B4:B52
Extra
PDB:
ATOM 1 O3' C A 3 -16.261 35.065 29.190 1.00 73.19 O
ATOM 2 P G A 4 -16.863 35.199 27.711 1.00 65.56 P
ATOM 3 OP1 G A 4 -18.167 35.907 27.771 1.00 71.33 O
ATOM 4 OP2 G A 4 -16.780 33.855 27.104 1.00 80.25 O
ATOM 5 O5' G A 4 -15.798 36.120 26.970 1.00 69.89 O
ATOM 6 C5' G A 4 -16.160 36.951 25.859 1.00 68.35 C
ATOM 7 C4' G A 4 -15.480 38.290 25.994 1.00 72.36 C
ATOM 8 O4' G A 4 -14.076 38.061 26.301 1.00 70.58 O
ATOM 9 C3' G A 4 -15.472 39.160 24.752 1.00 70.06 C
ATOM 10 O3' G A 4 -16.557 39.935 24.275 1.00 71.66 O
ATOM 11 C2' G A 4 -14.136 38.952 24.068 1.00 71.90 C
ATOM 12 O2' G A 4 -13.603 40.143 23.526 1.00 74.84 O
ATOM 13 C1' G A 4 -13.251 38.502 25.232 1.00 58.92 C
ATOM 14 N9 G A 4 -12.479 37.361 24.777 1.00 43.81 N
ATOM 15 C8 G A 4 -12.642 36.046 25.138 1.00 51.11 C
ATOM 16 N7 G A 4 -11.826 35.237 24.514 1.00 53.80 N
ATOM 17 C5 G A 4 -11.074 36.074 23.699 1.00 35.91 C
ATOM 18 C6 G A 4 -10.047 35.775 22.798 1.00 38.22 C
ATOM 19 O6 G A 4 -9.581 34.667 22.509 1.00 53.88 O
ATOM 20 N1 G A 4 -9.548 36.923 22.191 1.00 35.14 N
ATOM 21 C2 G A 4 -9.994 38.191 22.419 1.00 34.35 C
ATOM 22 N2 G A 4 -9.388 39.159 21.740 1.00 33.02 N
ATOM 23 N3 G A 4 -10.967 38.487 23.254 1.00 40.35 N
ATOM 24 C4 G A 4 -11.458 37.387 23.858 1.00 47.59 C
ATOM 25 P G A 5 -17.372 39.426 22.980 1.00 83.03 P
ATOM 26 OP1 G A 5 -18.805 39.271 23.360 1.00 86.60 O
ATOM 27 OP2 G A 5 -16.627 38.272 22.403 1.00 78.26 O
ATOM 28 O5' G A 5 -17.256 40.613 21.935 1.00 54.70 O
TER
ATOM 1 O3' A B 51 -8.235 38.070 17.507 1.00 48.03 O
ATOM 2 P C B 52 -7.318 37.643 18.743 1.00 54.94 P
ATOM 3 OP1 C B 52 -7.089 36.179 18.735 1.00 62.93 O
ATOM 4 OP2 C B 52 -7.907 38.281 19.949 1.00 38.35 O
ATOM 5 O5' C B 52 -5.931 38.308 18.351 1.00 53.36 O
ATOM 6 C5' C B 52 -5.152 39.008 19.311 1.00 54.28 C
ATOM 7 C4' C B 52 -3.847 39.406 18.698 1.00 42.55 C
ATOM 8 O4' C B 52 -4.098 39.913 17.375 1.00 42.41 O
ATOM 9 C3' C B 52 -3.132 40.535 19.408 1.00 36.88 C
ATOM 10 O3' C B 52 -2.366 39.954 20.452 1.00 39.73 O
ATOM 11 C2' C B 52 -2.253 41.106 18.303 1.00 32.86 C
ATOM 12 O2' C B 52 -1.082 40.347 18.160 1.00 51.40 O
ATOM 13 C1' C B 52 -3.104 40.858 17.051 1.00 37.40 C
ATOM 14 N1 C B 52 -3.760 41.997 16.405 1.00 27.98 N
ATOM 15 C2 C B 52 -4.754 42.692 17.093 1.00 32.14 C
ATOM 16 O2 C B 52 -5.030 42.353 18.258 1.00 38.03 O
ATOM 17 N3 C B 52 -5.392 43.712 16.477 1.00 27.01 N
ATOM 18 C4 C B 52 -5.060 44.044 15.222 1.00 46.87 C
ATOM 19 N4 C B 52 -5.718 45.054 14.635 1.00 51.90 N
ATOM 20 C5 C B 52 -4.039 43.357 14.508 1.00 40.95 C
ATOM 21 C6 C B 52 -3.418 42.353 15.133 1.00 32.52 C
ATOM 22 P G B 53 -1.987 40.811 21.754 1.00 56.48 P
ATOM 23 OP1 G B 53 -1.168 41.969 21.302 1.00 64.10 O
ATOM 24 OP2 G B 53 -1.450 39.868 22.772 1.00 46.43 O
ATOM 25 O5' G B 53 -3.371 41.344 22.331 1.00 57.20 O
TER
ATOM 2 P G A 4 -16.863 35.199 27.711 1.00 65.56 P
ATOM 3 OP1 G A 4 -18.167 35.907 27.771 1.00 71.33 O
ATOM 4 OP2 G A 4 -16.780 33.855 27.104 1.00 80.25 O
ATOM 5 O5' G A 4 -15.798 36.120 26.970 1.00 69.89 O
ATOM 6 C5' G A 4 -16.160 36.951 25.859 1.00 68.35 C
ATOM 7 C4' G A 4 -15.480 38.290 25.994 1.00 72.36 C
ATOM 8 O4' G A 4 -14.076 38.061 26.301 1.00 70.58 O
ATOM 9 C3' G A 4 -15.472 39.160 24.752 1.00 70.06 C
ATOM 10 O3' G A 4 -16.557 39.935 24.275 1.00 71.66 O
ATOM 11 C2' G A 4 -14.136 38.952 24.068 1.00 71.90 C
ATOM 12 O2' G A 4 -13.603 40.143 23.526 1.00 74.84 O
ATOM 13 C1' G A 4 -13.251 38.502 25.232 1.00 58.92 C
ATOM 14 N9 G A 4 -12.479 37.361 24.777 1.00 43.81 N
ATOM 15 C8 G A 4 -12.642 36.046 25.138 1.00 51.11 C
ATOM 16 N7 G A 4 -11.826 35.237 24.514 1.00 53.80 N
ATOM 17 C5 G A 4 -11.074 36.074 23.699 1.00 35.91 C
ATOM 18 C6 G A 4 -10.047 35.775 22.798 1.00 38.22 C
ATOM 19 O6 G A 4 -9.581 34.667 22.509 1.00 53.88 O
ATOM 20 N1 G A 4 -9.548 36.923 22.191 1.00 35.14 N
ATOM 21 C2 G A 4 -9.994 38.191 22.419 1.00 34.35 C
ATOM 22 N2 G A 4 -9.388 39.159 21.740 1.00 33.02 N
ATOM 23 N3 G A 4 -10.967 38.487 23.254 1.00 40.35 N
ATOM 24 C4 G A 4 -11.458 37.387 23.858 1.00 47.59 C
ATOM 25 P G A 5 -17.372 39.426 22.980 1.00 83.03 P
ATOM 26 OP1 G A 5 -18.805 39.271 23.360 1.00 86.60 O
ATOM 27 OP2 G A 5 -16.627 38.272 22.403 1.00 78.26 O
ATOM 28 O5' G A 5 -17.256 40.613 21.935 1.00 54.70 O
TER
ATOM 1 O3' A B 51 -8.235 38.070 17.507 1.00 48.03 O
ATOM 2 P C B 52 -7.318 37.643 18.743 1.00 54.94 P
ATOM 3 OP1 C B 52 -7.089 36.179 18.735 1.00 62.93 O
ATOM 4 OP2 C B 52 -7.907 38.281 19.949 1.00 38.35 O
ATOM 5 O5' C B 52 -5.931 38.308 18.351 1.00 53.36 O
ATOM 6 C5' C B 52 -5.152 39.008 19.311 1.00 54.28 C
ATOM 7 C4' C B 52 -3.847 39.406 18.698 1.00 42.55 C
ATOM 8 O4' C B 52 -4.098 39.913 17.375 1.00 42.41 O
ATOM 9 C3' C B 52 -3.132 40.535 19.408 1.00 36.88 C
ATOM 10 O3' C B 52 -2.366 39.954 20.452 1.00 39.73 O
ATOM 11 C2' C B 52 -2.253 41.106 18.303 1.00 32.86 C
ATOM 12 O2' C B 52 -1.082 40.347 18.160 1.00 51.40 O
ATOM 13 C1' C B 52 -3.104 40.858 17.051 1.00 37.40 C
ATOM 14 N1 C B 52 -3.760 41.997 16.405 1.00 27.98 N
ATOM 15 C2 C B 52 -4.754 42.692 17.093 1.00 32.14 C
ATOM 16 O2 C B 52 -5.030 42.353 18.258 1.00 38.03 O
ATOM 17 N3 C B 52 -5.392 43.712 16.477 1.00 27.01 N
ATOM 18 C4 C B 52 -5.060 44.044 15.222 1.00 46.87 C
ATOM 19 N4 C B 52 -5.718 45.054 14.635 1.00 51.90 N
ATOM 20 C5 C B 52 -4.039 43.357 14.508 1.00 40.95 C
ATOM 21 C6 C B 52 -3.418 42.353 15.133 1.00 32.52 C
ATOM 22 P G B 53 -1.987 40.811 21.754 1.00 56.48 P
ATOM 23 OP1 G B 53 -1.168 41.969 21.302 1.00 64.10 O
ATOM 24 OP2 G B 53 -1.450 39.868 22.772 1.00 46.43 O
ATOM 25 O5' G B 53 -3.371 41.344 22.331 1.00 57.20 O
TER
Atoms:
OP1: (-18.167,35.907,27.771)
OP2: (-16.780,33.855,27.104)
C3': (-15.472,39.160,24.752)
C1': (-13.251,38.502,25.232)
C5': (-16.160,36.951,25.859)
O6: (-9.581,34.667,22.509)
O4': (-14.076,38.061,26.301)
C8: (-12.642,36.046,25.138)
C2: (-9.994,38.191,22.419)
C6: (-10.047,35.775,22.798)
C5: (-11.074,36.074,23.699)
C4: (-11.458,37.387,23.858)
P: (-16.863,35.199,27.711)
C4': (-15.480,38.290,25.994)
C2': (-14.136,38.952,24.068)
O2': (-13.603,40.143,23.526)
N1: (-9.548,36.923,22.191)
N2: (-9.388,39.159,21.740)
N3: (-10.967,38.487,23.254)
N7: (-11.826,35.237,24.514)
N9: (-12.479,37.361,24.777)
O5': (-15.798,36.120,26.970)
O3': (-16.557,39.935,24.275)
OP2: (-16.780,33.855,27.104)
C3': (-15.472,39.160,24.752)
C1': (-13.251,38.502,25.232)
C5': (-16.160,36.951,25.859)
O6: (-9.581,34.667,22.509)
O4': (-14.076,38.061,26.301)
C8: (-12.642,36.046,25.138)
C2: (-9.994,38.191,22.419)
C6: (-10.047,35.775,22.798)
C5: (-11.074,36.074,23.699)
C4: (-11.458,37.387,23.858)
P: (-16.863,35.199,27.711)
C4': (-15.480,38.290,25.994)
C2': (-14.136,38.952,24.068)
O2': (-13.603,40.143,23.526)
N1: (-9.548,36.923,22.191)
N2: (-9.388,39.159,21.740)
N3: (-10.967,38.487,23.254)
N7: (-11.826,35.237,24.514)
N9: (-12.479,37.361,24.777)
O5': (-15.798,36.120,26.970)
O3': (-16.557,39.935,24.275)
C2: (-4.754,42.692,17.093)
OP1: (-7.089,36.179,18.735)
OP2: (-7.907,38.281,19.949)
C4: (-5.060,44.044,15.222)
O5': (-5.931,38.308,18.351)
C3': (-3.132,40.535,19.408)
C1': (-3.104,40.858,17.051)
O4': (-4.098,39.913,17.375)
C5': (-5.152,39.008,19.311)
P: (-7.318,37.643,18.743)
O2: (-5.030,42.353,18.258)
C4': (-3.847,39.406,18.698)
C2': (-2.253,41.106,18.303)
O2': (-1.082,40.347,18.160)
N1: (-3.760,41.997,16.405)
N3: (-5.392,43.712,16.477)
N4: (-5.718,45.054,14.635)
C6: (-3.418,42.353,15.133)
C5: (-4.039,43.357,14.508)
O3': (-2.366,39.954,20.452)
OP1: (-7.089,36.179,18.735)
OP2: (-7.907,38.281,19.949)
C4: (-5.060,44.044,15.222)
O5': (-5.931,38.308,18.351)
C3': (-3.132,40.535,19.408)
C1': (-3.104,40.858,17.051)
O4': (-4.098,39.913,17.375)
C5': (-5.152,39.008,19.311)
P: (-7.318,37.643,18.743)
O2: (-5.030,42.353,18.258)
C4': (-3.847,39.406,18.698)
C2': (-2.253,41.106,18.303)
O2': (-1.082,40.347,18.160)
N1: (-3.760,41.997,16.405)
N3: (-5.392,43.712,16.477)
N4: (-5.718,45.054,14.635)
C6: (-3.418,42.353,15.133)
C5: (-4.039,43.357,14.508)
O3': (-2.366,39.954,20.452)
Image (generated by PyMOL):