Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A913:A1002
Extra
PDB:
ATOM 1 O3' C A 912 55.665 94.735 71.727 1.00 38.87 O
ATOM 2 P A A 913 54.216 94.036 71.826 1.00 40.47 P
ATOM 3 OP1 A A 913 53.347 94.686 70.806 1.00 40.80 O
ATOM 4 OP2 A A 913 53.780 94.037 73.247 1.00 40.94 O
ATOM 5 O5' A A 913 54.502 92.508 71.447 1.00 40.62 O
ATOM 6 C5' A A 913 55.302 92.172 70.276 1.00 40.09 C
ATOM 7 C4' A A 913 56.063 90.863 70.470 1.00 37.97 C
ATOM 8 O4' A A 913 57.088 90.993 71.486 1.00 35.04 O
ATOM 9 C3' A A 913 55.235 89.681 70.924 1.00 37.87 C
ATOM 10 O3' A A 913 54.527 89.096 69.842 1.00 39.92 O
ATOM 11 C2' A A 913 56.285 88.751 71.502 1.00 37.15 C
ATOM 12 O2' A A 913 56.910 87.936 70.524 1.00 37.09 O
ATOM 13 C1' A A 913 57.250 89.755 72.150 1.00 34.65 C
ATOM 14 N9 A A 913 56.904 89.939 73.559 1.00 32.75 N
ATOM 15 C8 A A 913 56.127 90.907 74.125 1.00 31.69 C
ATOM 16 N7 A A 913 55.913 90.735 75.404 1.00 30.69 N
ATOM 17 C5 A A 913 56.620 89.587 75.710 1.00 31.89 C
ATOM 18 C6 A A 913 56.767 88.841 76.906 1.00 32.10 C
ATOM 19 N6 A A 913 56.165 89.148 78.052 1.00 30.60 N
ATOM 20 N1 A A 913 57.548 87.738 76.867 1.00 32.81 N
ATOM 21 C2 A A 913 58.118 87.406 75.703 1.00 33.95 C
ATOM 22 N3 A A 913 58.042 88.010 74.522 1.00 33.71 N
ATOM 23 C4 A A 913 57.263 89.104 74.590 1.00 32.73 C
ATOM 24 P U A 914 53.041 88.565 70.083 1.00 41.09 P
ATOM 25 OP1 U A 914 52.436 88.209 68.777 1.00 41.05 O
ATOM 26 OP2 U A 914 52.348 89.537 70.968 1.00 41.27 O
ATOM 27 O5' U A 914 53.309 87.220 70.873 1.00 39.33 O
TER
ATOM 1 O3' U B1001 48.928 96.610 83.124 1.00 30.43 O
ATOM 2 P C B1002 50.403 97.213 83.252 1.00 29.10 P
ATOM 3 OP1 C B1002 50.448 97.987 84.510 1.00 27.76 O
ATOM 4 OP2 C B1002 50.708 97.871 81.977 1.00 28.54 O
ATOM 5 O5' C B1002 51.345 95.933 83.330 1.00 30.20 O
ATOM 6 C5' C B1002 51.186 94.959 84.364 1.00 33.91 C
ATOM 7 C4' C B1002 52.222 93.866 84.249 1.00 36.73 C
ATOM 8 O4' C B1002 52.018 93.117 83.030 1.00 37.81 O
ATOM 9 C3' C B1002 53.674 94.277 84.122 1.00 38.77 C
ATOM 10 O3' C B1002 54.208 94.701 85.369 1.00 40.13 O
ATOM 11 C2' C B1002 54.316 92.981 83.620 1.00 39.61 C
ATOM 12 O2' C B1002 54.499 92.033 84.653 1.00 42.40 O
ATOM 13 C1' C B1002 53.217 92.432 82.705 1.00 38.12 C
ATOM 14 N1 C B1002 53.453 92.537 81.252 1.00 36.80 N
ATOM 15 C2 C B1002 54.271 91.588 80.621 1.00 36.88 C
ATOM 16 O2 C B1002 54.843 90.732 81.307 1.00 36.50 O
ATOM 17 N3 C B1002 54.427 91.642 79.279 1.00 36.98 N
ATOM 18 C4 C B1002 53.836 92.610 78.575 1.00 35.97 C
ATOM 19 N4 C B1002 54.022 92.626 77.250 1.00 36.12 N
ATOM 20 C5 C B1002 53.030 93.607 79.195 1.00 36.00 C
ATOM 21 C6 C B1002 52.865 93.532 80.521 1.00 36.24 C
ATOM 22 P C B1003 55.311 95.865 85.408 1.00 39.69 P
ATOM 23 OP1 C B1003 55.803 96.068 84.032 1.00 42.30 O
ATOM 24 OP2 C B1003 56.257 95.524 86.494 1.00 40.57 O
ATOM 25 O5' C B1003 54.523 97.199 85.777 1.00 39.99 O
TER
ATOM 2 P A A 913 54.216 94.036 71.826 1.00 40.47 P
ATOM 3 OP1 A A 913 53.347 94.686 70.806 1.00 40.80 O
ATOM 4 OP2 A A 913 53.780 94.037 73.247 1.00 40.94 O
ATOM 5 O5' A A 913 54.502 92.508 71.447 1.00 40.62 O
ATOM 6 C5' A A 913 55.302 92.172 70.276 1.00 40.09 C
ATOM 7 C4' A A 913 56.063 90.863 70.470 1.00 37.97 C
ATOM 8 O4' A A 913 57.088 90.993 71.486 1.00 35.04 O
ATOM 9 C3' A A 913 55.235 89.681 70.924 1.00 37.87 C
ATOM 10 O3' A A 913 54.527 89.096 69.842 1.00 39.92 O
ATOM 11 C2' A A 913 56.285 88.751 71.502 1.00 37.15 C
ATOM 12 O2' A A 913 56.910 87.936 70.524 1.00 37.09 O
ATOM 13 C1' A A 913 57.250 89.755 72.150 1.00 34.65 C
ATOM 14 N9 A A 913 56.904 89.939 73.559 1.00 32.75 N
ATOM 15 C8 A A 913 56.127 90.907 74.125 1.00 31.69 C
ATOM 16 N7 A A 913 55.913 90.735 75.404 1.00 30.69 N
ATOM 17 C5 A A 913 56.620 89.587 75.710 1.00 31.89 C
ATOM 18 C6 A A 913 56.767 88.841 76.906 1.00 32.10 C
ATOM 19 N6 A A 913 56.165 89.148 78.052 1.00 30.60 N
ATOM 20 N1 A A 913 57.548 87.738 76.867 1.00 32.81 N
ATOM 21 C2 A A 913 58.118 87.406 75.703 1.00 33.95 C
ATOM 22 N3 A A 913 58.042 88.010 74.522 1.00 33.71 N
ATOM 23 C4 A A 913 57.263 89.104 74.590 1.00 32.73 C
ATOM 24 P U A 914 53.041 88.565 70.083 1.00 41.09 P
ATOM 25 OP1 U A 914 52.436 88.209 68.777 1.00 41.05 O
ATOM 26 OP2 U A 914 52.348 89.537 70.968 1.00 41.27 O
ATOM 27 O5' U A 914 53.309 87.220 70.873 1.00 39.33 O
TER
ATOM 1 O3' U B1001 48.928 96.610 83.124 1.00 30.43 O
ATOM 2 P C B1002 50.403 97.213 83.252 1.00 29.10 P
ATOM 3 OP1 C B1002 50.448 97.987 84.510 1.00 27.76 O
ATOM 4 OP2 C B1002 50.708 97.871 81.977 1.00 28.54 O
ATOM 5 O5' C B1002 51.345 95.933 83.330 1.00 30.20 O
ATOM 6 C5' C B1002 51.186 94.959 84.364 1.00 33.91 C
ATOM 7 C4' C B1002 52.222 93.866 84.249 1.00 36.73 C
ATOM 8 O4' C B1002 52.018 93.117 83.030 1.00 37.81 O
ATOM 9 C3' C B1002 53.674 94.277 84.122 1.00 38.77 C
ATOM 10 O3' C B1002 54.208 94.701 85.369 1.00 40.13 O
ATOM 11 C2' C B1002 54.316 92.981 83.620 1.00 39.61 C
ATOM 12 O2' C B1002 54.499 92.033 84.653 1.00 42.40 O
ATOM 13 C1' C B1002 53.217 92.432 82.705 1.00 38.12 C
ATOM 14 N1 C B1002 53.453 92.537 81.252 1.00 36.80 N
ATOM 15 C2 C B1002 54.271 91.588 80.621 1.00 36.88 C
ATOM 16 O2 C B1002 54.843 90.732 81.307 1.00 36.50 O
ATOM 17 N3 C B1002 54.427 91.642 79.279 1.00 36.98 N
ATOM 18 C4 C B1002 53.836 92.610 78.575 1.00 35.97 C
ATOM 19 N4 C B1002 54.022 92.626 77.250 1.00 36.12 N
ATOM 20 C5 C B1002 53.030 93.607 79.195 1.00 36.00 C
ATOM 21 C6 C B1002 52.865 93.532 80.521 1.00 36.24 C
ATOM 22 P C B1003 55.311 95.865 85.408 1.00 39.69 P
ATOM 23 OP1 C B1003 55.803 96.068 84.032 1.00 42.30 O
ATOM 24 OP2 C B1003 56.257 95.524 86.494 1.00 40.57 O
ATOM 25 O5' C B1003 54.523 97.199 85.777 1.00 39.99 O
TER
Atoms:
OP1: (53.347,94.686,70.806)
OP2: (53.780,94.037,73.247)
C3': (55.235,89.681,70.924)
C1': (57.250,89.755,72.150)
C5': (55.302,92.172,70.276)
O4': (57.088,90.993,71.486)
C8: (56.127,90.907,74.125)
O2': (56.910,87.936,70.524)
C6: (56.767,88.841,76.906)
C5: (56.620,89.587,75.710)
C4: (57.263,89.104,74.590)
P: (54.216,94.036,71.826)
C4': (56.063,90.863,70.470)
C2': (56.285,88.751,71.502)
C2: (58.118,87.406,75.703)
N1: (57.548,87.738,76.867)
N3: (58.042,88.010,74.522)
N6: (56.165,89.148,78.052)
N7: (55.913,90.735,75.404)
N9: (56.904,89.939,73.559)
O5': (54.502,92.508,71.447)
O3': (54.527,89.096,69.842)
OP2: (53.780,94.037,73.247)
C3': (55.235,89.681,70.924)
C1': (57.250,89.755,72.150)
C5': (55.302,92.172,70.276)
O4': (57.088,90.993,71.486)
C8: (56.127,90.907,74.125)
O2': (56.910,87.936,70.524)
C6: (56.767,88.841,76.906)
C5: (56.620,89.587,75.710)
C4: (57.263,89.104,74.590)
P: (54.216,94.036,71.826)
C4': (56.063,90.863,70.470)
C2': (56.285,88.751,71.502)
C2: (58.118,87.406,75.703)
N1: (57.548,87.738,76.867)
N3: (58.042,88.010,74.522)
N6: (56.165,89.148,78.052)
N7: (55.913,90.735,75.404)
N9: (56.904,89.939,73.559)
O5': (54.502,92.508,71.447)
O3': (54.527,89.096,69.842)
C2: (54.271,91.588,80.621)
OP1: (50.448,97.987,84.510)
OP2: (50.708,97.871,81.977)
C4: (53.836,92.610,78.575)
O5': (51.345,95.933,83.330)
C3': (53.674,94.277,84.122)
C1': (53.217,92.432,82.705)
O4': (52.018,93.117,83.030)
C5': (51.186,94.959,84.364)
P: (50.403,97.213,83.252)
O2: (54.843,90.732,81.307)
C4': (52.222,93.866,84.249)
C2': (54.316,92.981,83.620)
O2': (54.499,92.033,84.653)
N1: (53.453,92.537,81.252)
N3: (54.427,91.642,79.279)
N4: (54.022,92.626,77.250)
C6: (52.865,93.532,80.521)
C5: (53.030,93.607,79.195)
O3': (54.208,94.701,85.369)
OP1: (50.448,97.987,84.510)
OP2: (50.708,97.871,81.977)
C4: (53.836,92.610,78.575)
O5': (51.345,95.933,83.330)
C3': (53.674,94.277,84.122)
C1': (53.217,92.432,82.705)
O4': (52.018,93.117,83.030)
C5': (51.186,94.959,84.364)
P: (50.403,97.213,83.252)
O2: (54.843,90.732,81.307)
C4': (52.222,93.866,84.249)
C2': (54.316,92.981,83.620)
O2': (54.499,92.033,84.653)
N1: (53.453,92.537,81.252)
N3: (54.427,91.642,79.279)
N4: (54.022,92.626,77.250)
C6: (52.865,93.532,80.521)
C5: (53.030,93.607,79.195)
O3': (54.208,94.701,85.369)
Image (generated by PyMOL):