Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A333:A318
Extra
PDB:
ATOM 1 O3' C A 332 26.385 141.540 27.421 1.00 56.03 O
ATOM 2 P G A 333 26.399 140.767 26.022 1.00 58.05 P
ATOM 3 OP1 G A 333 27.751 140.956 25.425 1.00 57.01 O
ATOM 4 OP2 G A 333 25.196 141.239 25.295 1.00 59.31 O
ATOM 5 O5' G A 333 26.199 139.228 26.413 1.00 57.28 O
ATOM 6 C5' G A 333 27.341 138.368 26.668 1.00 56.90 C
ATOM 7 C4' G A 333 26.997 137.277 27.671 1.00 56.97 C
ATOM 8 O4' G A 333 25.829 137.651 28.450 1.00 58.24 O
ATOM 9 C3' G A 333 26.684 135.872 27.171 1.00 55.50 C
ATOM 10 O3' G A 333 27.882 135.130 26.959 1.00 54.74 O
ATOM 11 C2' G A 333 25.967 135.290 28.376 1.00 56.30 C
ATOM 12 O2' G A 333 26.914 135.009 29.391 1.00 54.93 O
ATOM 13 C1' G A 333 25.129 136.484 28.844 1.00 58.29 C
ATOM 14 N9 G A 333 23.770 136.555 28.302 1.00 60.39 N
ATOM 15 C8 G A 333 23.225 137.596 27.587 1.00 61.03 C
ATOM 16 N7 G A 333 21.978 137.398 27.256 1.00 61.10 N
ATOM 17 C5 G A 333 21.677 136.150 27.777 1.00 61.74 C
ATOM 18 C6 G A 333 20.467 135.409 27.737 1.00 62.39 C
ATOM 19 O6 G A 333 19.391 135.718 27.209 1.00 63.65 O
ATOM 20 N1 G A 333 20.590 134.194 28.398 1.00 62.33 N
ATOM 21 C2 G A 333 21.732 133.746 29.017 1.00 61.99 C
ATOM 22 N2 G A 333 21.645 132.548 29.628 1.00 62.25 N
ATOM 23 N3 G A 333 22.874 134.422 29.046 1.00 62.22 N
ATOM 24 C4 G A 333 22.773 135.609 28.419 1.00 61.14 C
ATOM 25 P U A 334 27.946 133.962 25.844 1.00 56.00 P
ATOM 26 OP1 U A 334 29.254 133.272 26.023 1.00 56.64 O
ATOM 27 OP2 U A 334 27.596 134.517 24.511 1.00 56.86 O
ATOM 28 O5' U A 334 26.855 132.896 26.294 1.00 56.04 O
TER
ATOM 1 O3' A B 317 19.496 128.886 27.313 1.00 55.06 O
ATOM 2 P C B 318 20.319 128.428 28.636 1.00 53.87 P
ATOM 3 OP1 C B 318 20.370 129.631 29.493 1.00 54.03 O
ATOM 4 OP2 C B 318 21.589 127.721 28.262 1.00 51.34 O
ATOM 5 O5' C B 318 19.373 127.400 29.407 1.00 54.11 O
ATOM 6 C5' C B 318 18.154 127.845 30.049 1.00 54.06 C
ATOM 7 C4' C B 318 17.885 127.032 31.298 1.00 54.65 C
ATOM 8 O4' C B 318 16.537 127.323 31.799 1.00 55.31 O
ATOM 9 C3' C B 318 17.926 125.521 31.086 1.00 54.34 C
ATOM 10 O3' C B 318 18.388 124.888 32.278 1.00 53.96 O
ATOM 11 C2' C B 318 16.448 125.188 30.882 1.00 54.56 C
ATOM 12 O2' C B 318 16.092 123.850 31.145 1.00 54.11 O
ATOM 13 C1' C B 318 15.809 126.110 31.908 1.00 55.31 C
ATOM 14 N1 C B 318 14.369 126.352 31.714 1.00 56.68 N
ATOM 15 C2 C B 318 13.911 127.051 30.572 1.00 58.07 C
ATOM 16 O2 C B 318 14.719 127.406 29.692 1.00 59.21 O
ATOM 17 N3 C B 318 12.588 127.309 30.448 1.00 59.59 N
ATOM 18 C4 C B 318 11.726 126.881 31.374 1.00 58.98 C
ATOM 19 N4 C B 318 10.432 127.172 31.195 1.00 58.74 N
ATOM 20 C5 C B 318 12.153 126.144 32.519 1.00 58.87 C
ATOM 21 C6 C B 318 13.473 125.908 32.650 1.00 57.77 C
ATOM 22 P A B 319 19.903 124.328 32.392 1.00 53.70 P
ATOM 23 OP1 A B 319 20.604 124.221 31.079 1.00 53.65 O
ATOM 24 OP2 A B 319 19.813 123.138 33.255 1.00 53.05 O
ATOM 25 O5' A B 319 20.649 125.481 33.191 1.00 53.23 O
TER
ATOM 2 P G A 333 26.399 140.767 26.022 1.00 58.05 P
ATOM 3 OP1 G A 333 27.751 140.956 25.425 1.00 57.01 O
ATOM 4 OP2 G A 333 25.196 141.239 25.295 1.00 59.31 O
ATOM 5 O5' G A 333 26.199 139.228 26.413 1.00 57.28 O
ATOM 6 C5' G A 333 27.341 138.368 26.668 1.00 56.90 C
ATOM 7 C4' G A 333 26.997 137.277 27.671 1.00 56.97 C
ATOM 8 O4' G A 333 25.829 137.651 28.450 1.00 58.24 O
ATOM 9 C3' G A 333 26.684 135.872 27.171 1.00 55.50 C
ATOM 10 O3' G A 333 27.882 135.130 26.959 1.00 54.74 O
ATOM 11 C2' G A 333 25.967 135.290 28.376 1.00 56.30 C
ATOM 12 O2' G A 333 26.914 135.009 29.391 1.00 54.93 O
ATOM 13 C1' G A 333 25.129 136.484 28.844 1.00 58.29 C
ATOM 14 N9 G A 333 23.770 136.555 28.302 1.00 60.39 N
ATOM 15 C8 G A 333 23.225 137.596 27.587 1.00 61.03 C
ATOM 16 N7 G A 333 21.978 137.398 27.256 1.00 61.10 N
ATOM 17 C5 G A 333 21.677 136.150 27.777 1.00 61.74 C
ATOM 18 C6 G A 333 20.467 135.409 27.737 1.00 62.39 C
ATOM 19 O6 G A 333 19.391 135.718 27.209 1.00 63.65 O
ATOM 20 N1 G A 333 20.590 134.194 28.398 1.00 62.33 N
ATOM 21 C2 G A 333 21.732 133.746 29.017 1.00 61.99 C
ATOM 22 N2 G A 333 21.645 132.548 29.628 1.00 62.25 N
ATOM 23 N3 G A 333 22.874 134.422 29.046 1.00 62.22 N
ATOM 24 C4 G A 333 22.773 135.609 28.419 1.00 61.14 C
ATOM 25 P U A 334 27.946 133.962 25.844 1.00 56.00 P
ATOM 26 OP1 U A 334 29.254 133.272 26.023 1.00 56.64 O
ATOM 27 OP2 U A 334 27.596 134.517 24.511 1.00 56.86 O
ATOM 28 O5' U A 334 26.855 132.896 26.294 1.00 56.04 O
TER
ATOM 1 O3' A B 317 19.496 128.886 27.313 1.00 55.06 O
ATOM 2 P C B 318 20.319 128.428 28.636 1.00 53.87 P
ATOM 3 OP1 C B 318 20.370 129.631 29.493 1.00 54.03 O
ATOM 4 OP2 C B 318 21.589 127.721 28.262 1.00 51.34 O
ATOM 5 O5' C B 318 19.373 127.400 29.407 1.00 54.11 O
ATOM 6 C5' C B 318 18.154 127.845 30.049 1.00 54.06 C
ATOM 7 C4' C B 318 17.885 127.032 31.298 1.00 54.65 C
ATOM 8 O4' C B 318 16.537 127.323 31.799 1.00 55.31 O
ATOM 9 C3' C B 318 17.926 125.521 31.086 1.00 54.34 C
ATOM 10 O3' C B 318 18.388 124.888 32.278 1.00 53.96 O
ATOM 11 C2' C B 318 16.448 125.188 30.882 1.00 54.56 C
ATOM 12 O2' C B 318 16.092 123.850 31.145 1.00 54.11 O
ATOM 13 C1' C B 318 15.809 126.110 31.908 1.00 55.31 C
ATOM 14 N1 C B 318 14.369 126.352 31.714 1.00 56.68 N
ATOM 15 C2 C B 318 13.911 127.051 30.572 1.00 58.07 C
ATOM 16 O2 C B 318 14.719 127.406 29.692 1.00 59.21 O
ATOM 17 N3 C B 318 12.588 127.309 30.448 1.00 59.59 N
ATOM 18 C4 C B 318 11.726 126.881 31.374 1.00 58.98 C
ATOM 19 N4 C B 318 10.432 127.172 31.195 1.00 58.74 N
ATOM 20 C5 C B 318 12.153 126.144 32.519 1.00 58.87 C
ATOM 21 C6 C B 318 13.473 125.908 32.650 1.00 57.77 C
ATOM 22 P A B 319 19.903 124.328 32.392 1.00 53.70 P
ATOM 23 OP1 A B 319 20.604 124.221 31.079 1.00 53.65 O
ATOM 24 OP2 A B 319 19.813 123.138 33.255 1.00 53.05 O
ATOM 25 O5' A B 319 20.649 125.481 33.191 1.00 53.23 O
TER
Atoms:
OP1: (27.751,140.956,25.425)
OP2: (25.196,141.239,25.295)
C3': (26.684,135.872,27.171)
C1': (25.129,136.484,28.844)
C5': (27.341,138.368,26.668)
O6: (19.391,135.718,27.209)
O4': (25.829,137.651,28.450)
C8: (23.225,137.596,27.587)
C2: (21.732,133.746,29.017)
C6: (20.467,135.409,27.737)
C5: (21.677,136.150,27.777)
C4: (22.773,135.609,28.419)
P: (26.399,140.767,26.022)
C4': (26.997,137.277,27.671)
C2': (25.967,135.290,28.376)
O2': (26.914,135.009,29.391)
N1: (20.590,134.194,28.398)
N2: (21.645,132.548,29.628)
N3: (22.874,134.422,29.046)
N7: (21.978,137.398,27.256)
N9: (23.770,136.555,28.302)
O5': (26.199,139.228,26.413)
O3': (27.882,135.130,26.959)
OP2: (25.196,141.239,25.295)
C3': (26.684,135.872,27.171)
C1': (25.129,136.484,28.844)
C5': (27.341,138.368,26.668)
O6: (19.391,135.718,27.209)
O4': (25.829,137.651,28.450)
C8: (23.225,137.596,27.587)
C2: (21.732,133.746,29.017)
C6: (20.467,135.409,27.737)
C5: (21.677,136.150,27.777)
C4: (22.773,135.609,28.419)
P: (26.399,140.767,26.022)
C4': (26.997,137.277,27.671)
C2': (25.967,135.290,28.376)
O2': (26.914,135.009,29.391)
N1: (20.590,134.194,28.398)
N2: (21.645,132.548,29.628)
N3: (22.874,134.422,29.046)
N7: (21.978,137.398,27.256)
N9: (23.770,136.555,28.302)
O5': (26.199,139.228,26.413)
O3': (27.882,135.130,26.959)
C2: (13.911,127.051,30.572)
OP1: (20.370,129.631,29.493)
OP2: (21.589,127.721,28.262)
C4: (11.726,126.881,31.374)
O5': (19.373,127.400,29.407)
C3': (17.926,125.521,31.086)
C1': (15.809,126.110,31.908)
O4': (16.537,127.323,31.799)
C5': (18.154,127.845,30.049)
P: (20.319,128.428,28.636)
O2: (14.719,127.406,29.692)
C4': (17.885,127.032,31.298)
C2': (16.448,125.188,30.882)
O2': (16.092,123.850,31.145)
N1: (14.369,126.352,31.714)
N3: (12.588,127.309,30.448)
N4: (10.432,127.172,31.195)
C6: (13.473,125.908,32.650)
C5: (12.153,126.144,32.519)
O3': (18.388,124.888,32.278)
OP1: (20.370,129.631,29.493)
OP2: (21.589,127.721,28.262)
C4: (11.726,126.881,31.374)
O5': (19.373,127.400,29.407)
C3': (17.926,125.521,31.086)
C1': (15.809,126.110,31.908)
O4': (16.537,127.323,31.799)
C5': (18.154,127.845,30.049)
P: (20.319,128.428,28.636)
O2: (14.719,127.406,29.692)
C4': (17.885,127.032,31.298)
C2': (16.448,125.188,30.882)
O2': (16.092,123.850,31.145)
N1: (14.369,126.352,31.714)
N3: (12.588,127.309,30.448)
N4: (10.432,127.172,31.195)
C6: (13.473,125.908,32.650)
C5: (12.153,126.144,32.519)
O3': (18.388,124.888,32.278)
Image (generated by PyMOL):