ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A947:B105

Extra

PDB:
ATOM 1 O3' C A 946 64.397 56.762 120.752 1.00 59.36 O
ATOM 2 P G A 947 65.783 56.813 121.556 1.00 60.91 P
ATOM 3 OP1 G A 947 65.464 57.192 122.962 1.00 59.13 O
ATOM 4 OP2 G A 947 66.750 57.633 120.785 1.00 60.80 O
ATOM 5 O5' G A 947 66.245 55.286 121.504 1.00 64.89 O
ATOM 6 C5' G A 947 66.070 54.425 122.643 1.00 74.46 C
ATOM 7 C4' G A 947 65.977 52.970 122.226 1.00 78.85 C
ATOM 8 O4' G A 947 66.278 52.129 123.380 1.00 83.27 O
ATOM 9 C3' G A 947 64.614 52.497 121.725 1.00 79.07 C
ATOM 10 O3' G A 947 64.411 52.631 120.321 1.00 71.33 O
ATOM 11 C2' G A 947 64.561 51.055 122.211 1.00 84.21 C
ATOM 12 O2' G A 947 65.282 50.157 121.392 1.00 85.24 O
ATOM 13 C1' G A 947 65.225 51.198 123.582 1.00 88.11 C
ATOM 14 N9 G A 947 64.347 51.741 124.624 1.00 94.52 N
ATOM 15 C8 G A 947 64.728 52.148 125.885 1.00 96.80 C
ATOM 16 N7 G A 947 63.738 52.619 126.597 1.00 98.96 N
ATOM 17 C5 G A 947 62.628 52.515 125.763 1.00100.63 C
ATOM 18 C6 G A 947 61.261 52.878 125.987 1.00102.23 C
ATOM 19 O6 G A 947 60.749 53.380 127.002 1.00103.22 O
ATOM 20 N1 G A 947 60.468 52.601 124.872 1.00102.60 N
ATOM 21 C2 G A 947 60.922 52.047 123.695 1.00101.91 C
ATOM 22 N2 G A 947 60.006 51.858 122.730 1.00102.40 N
ATOM 23 N3 G A 947 62.184 51.703 123.476 1.00100.25 N
ATOM 24 C4 G A 947 62.979 51.966 124.544 1.00 98.70 C
ATOM 25 P A A 948 62.977 52.250 119.688 1.00 67.41 P
ATOM 26 OP1 A A 948 61.963 53.216 120.189 1.00 67.34 O
ATOM 27 OP2 A A 948 62.751 50.801 119.886 1.00 68.25 O
ATOM 28 O5' A A 948 63.178 52.489 118.128 1.00 62.58 O
TER

ATOM 1 O3' A B 104 55.816 55.331 121.390 1.00 48.77 O
ATOM 2 P C B 105 55.588 53.779 121.741 1.00 49.92 P
ATOM 3 OP1 C B 105 56.918 53.115 121.730 1.00 48.95 O
ATOM 4 OP2 C B 105 54.491 53.243 120.882 1.00 47.75 O
ATOM 5 O5' C B 105 55.072 53.825 123.247 1.00 48.57 O
ATOM 6 C5' C B 105 55.890 54.403 124.278 1.00 50.27 C
ATOM 7 C4' C B 105 55.087 54.607 125.531 1.00 52.28 C
ATOM 8 O4' C B 105 54.020 55.556 125.281 1.00 52.48 O
ATOM 9 C3' C B 105 54.380 53.364 126.031 1.00 54.36 C
ATOM 10 O3' C B 105 55.283 52.534 126.764 1.00 58.10 O
ATOM 11 C2' C B 105 53.235 53.953 126.847 1.00 53.77 C
ATOM 12 O2' C B 105 53.635 54.415 128.123 1.00 53.50 O
ATOM 13 C1' C B 105 52.854 55.160 125.986 1.00 52.33 C
ATOM 14 N1 C B 105 51.801 54.851 125.001 1.00 51.87 N
ATOM 15 C2 C B 105 50.463 55.113 125.330 1.00 52.48 C
ATOM 16 O2 C B 105 50.200 55.616 126.433 1.00 52.54 O
ATOM 17 N3 C B 105 49.494 54.809 124.434 1.00 52.46 N
ATOM 18 C4 C B 105 49.820 54.275 123.252 1.00 51.53 C
ATOM 19 N4 C B 105 48.831 53.992 122.401 1.00 52.02 N
ATOM 20 C5 C B 105 51.173 54.009 122.891 1.00 51.80 C
ATOM 21 C6 C B 105 52.120 54.308 123.786 1.00 50.62 C
ATOM 22 P C B 106 55.015 50.951 126.861 1.00 59.93 P
ATOM 23 OP1 C B 106 56.187 50.363 127.559 1.00 59.39 O
ATOM 24 OP2 C B 106 54.627 50.432 125.527 1.00 58.56 O
ATOM 25 O5' C B 106 53.758 50.877 127.836 1.00 60.20 O
TER

Atoms:
OP1: (65.464,57.192,122.962)
OP2: (66.750,57.633,120.785)
C3': (64.614,52.497,121.725)
C1': (65.225,51.198,123.582)
C5': (66.070,54.425,122.643)
O6: (60.749,53.380,127.002)
O4': (66.278,52.129,123.380)
C8: (64.728,52.148,125.885)
C2: (60.922,52.047,123.695)
C6: (61.261,52.878,125.987)
C5: (62.628,52.515,125.763)
C4: (62.979,51.966,124.544)
P: (65.783,56.813,121.556)
C4': (65.977,52.970,122.226)
C2': (64.561,51.055,122.211)
O2': (65.282,50.157,121.392)
N1: (60.468,52.601,124.872)
N2: (60.006,51.858,122.730)
N3: (62.184,51.703,123.476)
N7: (63.738,52.619,126.597)
N9: (64.347,51.741,124.624)
O5': (66.245,55.286,121.504)
O3': (64.411,52.631,120.321)
C2: (50.463,55.113,125.330)
OP1: (56.918,53.115,121.730)
OP2: (54.491,53.243,120.882)
C4: (49.820,54.275,123.252)
O5': (55.072,53.825,123.247)
C3': (54.380,53.364,126.031)
C1': (52.854,55.160,125.986)
O4': (54.020,55.556,125.281)
C5': (55.890,54.403,124.278)
P: (55.588,53.779,121.741)
O2: (50.200,55.616,126.433)
C4': (55.087,54.607,125.531)
C2': (53.235,53.953,126.847)
O2': (53.635,54.415,128.123)
N1: (51.801,54.851,125.001)
N3: (49.494,54.809,124.434)
N4: (48.831,53.992,122.401)
C6: (52.120,54.308,123.786)
C5: (51.173,54.009,122.891)
O3': (55.283,52.534,126.764)
Image (generated by PyMOL):
PyMOL image
show in jmol