ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1U9S:A52:A141

Extra

PDB:
ATOM 1 O3' A A 51 33.564 -13.303 129.855 1.00 80.47 O
ATOM 2 P G A 52 34.231 -12.482 131.096 1.00 79.89 P
ATOM 3 OP1 G A 52 33.115 -12.056 131.982 1.00 79.08 O
ATOM 4 OP2 G A 52 35.234 -11.488 130.648 1.00 88.45 O
ATOM 5 O5' G A 52 35.160 -13.515 131.880 1.00 77.32 O
ATOM 6 C5' G A 52 35.929 -13.113 133.049 1.00 70.11 C
ATOM 7 C4' G A 52 37.115 -12.213 132.678 1.00 65.40 C
ATOM 8 O4' G A 52 36.755 -10.820 132.910 1.00 56.47 O
ATOM 9 C3' G A 52 38.324 -12.400 133.606 1.00 70.00 C
ATOM 10 O3' G A 52 39.143 -13.489 133.129 1.00 67.83 O
ATOM 11 C2' G A 52 39.054 -11.054 133.583 1.00 61.75 C
ATOM 12 O2' G A 52 40.102 -10.802 132.677 1.00 73.75 O
ATOM 13 C1' G A 52 37.912 -10.100 133.301 1.00 62.25 C
ATOM 14 N9 G A 52 37.610 -9.081 134.288 1.00 60.54 N
ATOM 15 C8 G A 52 37.728 -9.124 135.651 1.00 62.72 C
ATOM 16 N7 G A 52 37.394 -7.995 136.222 1.00 61.46 N
ATOM 17 C5 G A 52 37.031 -7.175 135.164 1.00 59.11 C
ATOM 18 C6 G A 52 36.575 -5.841 135.148 1.00 63.45 C
ATOM 19 O6 G A 52 36.385 -5.077 136.100 1.00 64.37 O
ATOM 20 N1 G A 52 36.334 -5.406 133.852 1.00 67.09 N
ATOM 21 C2 G A 52 36.508 -6.165 132.721 1.00 66.58 C
ATOM 22 N2 G A 52 36.227 -5.590 131.552 1.00 71.48 N
ATOM 23 N3 G A 52 36.927 -7.403 132.731 1.00 62.01 N
ATOM 24 C4 G A 52 37.165 -7.839 133.972 1.00 58.84 C
ATOM 25 P A A 53 40.310 -13.220 132.046 1.00 60.59 P
ATOM 26 OP1 A A 53 41.585 -12.830 132.703 1.00 52.00 O
ATOM 27 OP2 A A 53 39.716 -12.333 131.012 1.00 68.74 O
ATOM 28 O5' A A 53 40.498 -14.624 131.330 1.00 66.48 O
TER

ATOM 1 O3' A B 140 37.687 -1.405 131.401 1.00 58.58 O
ATOM 2 P C B 141 36.123 -1.798 131.316 1.00 60.50 P
ATOM 3 OP1 C B 141 35.271 -1.103 132.327 1.00 63.62 O
ATOM 4 OP2 C B 141 36.162 -3.262 131.321 1.00 66.65 O
ATOM 5 O5' C B 141 35.653 -1.307 129.880 1.00 62.89 O
ATOM 6 C5' C B 141 36.019 -2.001 128.697 1.00 60.97 C
ATOM 7 C4' C B 141 35.488 -1.250 127.516 1.00 63.53 C
ATOM 8 O4' C B 141 36.068 0.073 127.514 1.00 69.81 O
ATOM 9 C3' C B 141 35.896 -1.844 126.182 1.00 69.20 C
ATOM 10 O3' C B 141 34.816 -2.701 125.817 1.00 76.59 O
ATOM 11 C2' C B 141 35.841 -0.635 125.242 1.00 71.93 C
ATOM 12 O2' C B 141 34.559 -0.385 124.701 1.00 84.25 O
ATOM 13 C1' C B 141 36.181 0.515 126.186 1.00 68.89 C
ATOM 14 N1 C B 141 37.380 1.333 126.002 1.00 60.94 N
ATOM 15 C2 C B 141 37.266 2.467 125.206 1.00 60.66 C
ATOM 16 O2 C B 141 36.177 2.713 124.680 1.00 64.17 O
ATOM 17 N3 C B 141 38.333 3.263 125.028 1.00 58.11 N
ATOM 18 C4 C B 141 39.487 2.959 125.609 1.00 58.47 C
ATOM 19 N4 C B 141 40.523 3.771 125.392 1.00 59.61 N
ATOM 20 C5 C B 141 39.635 1.804 126.430 1.00 56.43 C
ATOM 21 C6 C B 141 38.564 1.023 126.594 1.00 57.22 C
ATOM 22 P G B 142 34.931 -4.296 125.981 1.00 79.21 P
ATOM 23 OP1 G B 142 33.743 -4.735 126.767 1.00 79.12 O
ATOM 24 OP2 G B 142 36.294 -4.678 126.443 1.00 71.23 O
ATOM 25 O5' G B 142 34.738 -4.803 124.481 1.00 75.29 O
TER

Atoms:
OP1: (33.115,-12.056,131.982)
OP2: (35.234,-11.488,130.648)
C3': (38.324,-12.400,133.606)
C1': (37.912,-10.100,133.301)
C5': (35.929,-13.113,133.049)
O6: (36.385,-5.077,136.100)
O4': (36.755,-10.820,132.910)
C8: (37.728,-9.124,135.651)
C2: (36.508,-6.165,132.721)
C6: (36.575,-5.841,135.148)
C5: (37.031,-7.175,135.164)
C4: (37.165,-7.839,133.972)
P: (34.231,-12.482,131.096)
C4': (37.115,-12.213,132.678)
C2': (39.054,-11.054,133.583)
O2': (40.102,-10.802,132.677)
N1: (36.334,-5.406,133.852)
N2: (36.227,-5.590,131.552)
N3: (36.927,-7.403,132.731)
N7: (37.394,-7.995,136.222)
N9: (37.610,-9.081,134.288)
O5': (35.160,-13.515,131.880)
O3': (39.143,-13.489,133.129)
C2: (37.266,2.467,125.206)
OP1: (35.271,-1.103,132.327)
OP2: (36.162,-3.262,131.321)
C4: (39.487,2.959,125.609)
O5': (35.653,-1.307,129.880)
C3': (35.896,-1.844,126.182)
C1': (36.181,0.515,126.186)
O4': (36.068,0.073,127.514)
C5': (36.019,-2.001,128.697)
P: (36.123,-1.798,131.316)
O2: (36.177,2.713,124.680)
C4': (35.488,-1.250,127.516)
C2': (35.841,-0.635,125.242)
O2': (34.559,-0.385,124.701)
N1: (37.380,1.333,126.002)
N3: (38.333,3.263,125.028)
N4: (40.523,3.771,125.392)
C6: (38.564,1.023,126.594)
C5: (39.635,1.804,126.430)
O3': (34.816,-2.701,125.817)
Image (generated by PyMOL):
PyMOL image
show in jmol