Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DH3:H4:H3
Extra
PDB:
ATOM 1 O3' A A 3 19.521 -13.672 -3.267 1.00 34.07 O
ATOM 2 P C A 4 18.953 -12.895 -1.970 1.00 36.57 P
ATOM 3 OP1 C A 4 20.128 -12.247 -1.299 1.00 34.46 O
ATOM 4 OP2 C A 4 18.073 -13.836 -1.214 1.00 35.81 O
ATOM 5 O5' C A 4 18.060 -11.741 -2.625 1.00 34.57 O
ATOM 6 C5' C A 4 18.757 -10.711 -3.306 1.00 34.05 C
ATOM 7 C4' C A 4 17.836 -9.932 -4.218 1.00 33.94 C
ATOM 8 O4' C A 4 17.381 -10.753 -5.340 1.00 33.23 O
ATOM 9 C3' C A 4 16.589 -9.426 -3.485 1.00 33.51 C
ATOM 10 O3' C A 4 16.930 -8.272 -2.704 1.00 33.80 O
ATOM 11 C2' C A 4 15.735 -9.116 -4.705 1.00 33.51 C
ATOM 12 O2' C A 4 16.084 -7.880 -5.327 1.00 32.37 O
ATOM 13 C1' C A 4 16.031 -10.363 -5.575 1.00 33.15 C
ATOM 14 N1 C A 4 15.068 -11.411 -5.156 1.00 32.03 N
ATOM 15 C2 C A 4 13.740 -11.314 -5.621 1.00 31.13 C
ATOM 16 O2 C A 4 13.439 -10.399 -6.393 1.00 30.22 O
ATOM 17 N3 C A 4 12.824 -12.238 -5.241 1.00 30.06 N
ATOM 18 C4 C A 4 13.218 -13.207 -4.426 1.00 29.46 C
ATOM 19 N4 C A 4 12.288 -14.082 -4.081 1.00 28.50 N
ATOM 20 C5 C A 4 14.565 -13.330 -3.939 1.00 30.44 C
ATOM 21 C6 C A 4 15.459 -12.414 -4.316 1.00 30.86 C
ATOM 22 P G A 5 16.330 -7.872 -1.258 1.00 37.23 P
ATOM 23 OP1 G A 5 17.127 -6.687 -0.794 1.00 35.74 O
ATOM 24 OP2 G A 5 16.260 -9.098 -0.406 1.00 34.25 O
ATOM 25 O5' G A 5 14.830 -7.329 -1.537 1.00 34.53 O
TER
ATOM 1 O3' A B 2 17.727 -19.301 -2.777 1.00 37.93 O
ATOM 2 P A B 3 17.212 -17.953 -2.098 1.00 38.56 P
ATOM 3 OP1 A B 3 17.885 -17.742 -0.791 1.00 39.05 O
ATOM 4 OP2 A B 3 15.735 -17.917 -2.154 1.00 38.03 O
ATOM 5 O5' A B 3 17.807 -16.856 -3.108 1.00 37.30 O
ATOM 6 C5' A B 3 19.186 -16.847 -3.484 1.00 34.55 C
ATOM 7 C4' A B 3 19.415 -15.729 -4.480 1.00 34.21 C
ATOM 8 O4' A B 3 18.897 -16.099 -5.803 1.00 34.38 O
ATOM 9 C3' A B 3 18.712 -14.432 -4.108 1.00 34.06 C
ATOM 10 O3' A B 3 19.521 -13.672 -3.267 1.00 34.07 O
ATOM 11 C2' A B 3 18.581 -13.767 -5.462 1.00 35.02 C
ATOM 12 O2' A B 3 19.798 -13.160 -5.862 1.00 35.85 O
ATOM 13 C1' A B 3 18.214 -14.972 -6.340 1.00 34.71 C
ATOM 14 N9 A B 3 16.755 -15.194 -6.364 1.00 34.36 N
ATOM 15 C8 A B 3 16.039 -16.164 -5.695 1.00 34.21 C
ATOM 16 N7 A B 3 14.741 -16.118 -5.909 1.00 33.91 N
ATOM 17 C5 A B 3 14.599 -15.051 -6.790 1.00 33.02 C
ATOM 18 C6 A B 3 13.466 -14.486 -7.403 1.00 32.28 C
ATOM 19 N6 A B 3 12.251 -14.962 -7.167 1.00 31.70 N
ATOM 20 N1 A B 3 13.617 -13.424 -8.231 1.00 32.78 N
ATOM 21 C2 A B 3 14.865 -12.960 -8.410 1.00 33.45 C
ATOM 22 N3 A B 3 16.018 -13.408 -7.882 1.00 33.55 N
ATOM 23 C4 A B 3 15.818 -14.467 -7.074 1.00 33.18 C
ATOM 24 P C B 4 18.953 -12.895 -1.970 1.00 36.57 P
ATOM 25 OP1 C B 4 20.128 -12.247 -1.299 1.00 34.46 O
ATOM 26 OP2 C B 4 18.073 -13.836 -1.214 1.00 35.81 O
ATOM 27 O5' C B 4 18.060 -11.741 -2.625 1.00 34.57 O
TER
ATOM 2 P C A 4 18.953 -12.895 -1.970 1.00 36.57 P
ATOM 3 OP1 C A 4 20.128 -12.247 -1.299 1.00 34.46 O
ATOM 4 OP2 C A 4 18.073 -13.836 -1.214 1.00 35.81 O
ATOM 5 O5' C A 4 18.060 -11.741 -2.625 1.00 34.57 O
ATOM 6 C5' C A 4 18.757 -10.711 -3.306 1.00 34.05 C
ATOM 7 C4' C A 4 17.836 -9.932 -4.218 1.00 33.94 C
ATOM 8 O4' C A 4 17.381 -10.753 -5.340 1.00 33.23 O
ATOM 9 C3' C A 4 16.589 -9.426 -3.485 1.00 33.51 C
ATOM 10 O3' C A 4 16.930 -8.272 -2.704 1.00 33.80 O
ATOM 11 C2' C A 4 15.735 -9.116 -4.705 1.00 33.51 C
ATOM 12 O2' C A 4 16.084 -7.880 -5.327 1.00 32.37 O
ATOM 13 C1' C A 4 16.031 -10.363 -5.575 1.00 33.15 C
ATOM 14 N1 C A 4 15.068 -11.411 -5.156 1.00 32.03 N
ATOM 15 C2 C A 4 13.740 -11.314 -5.621 1.00 31.13 C
ATOM 16 O2 C A 4 13.439 -10.399 -6.393 1.00 30.22 O
ATOM 17 N3 C A 4 12.824 -12.238 -5.241 1.00 30.06 N
ATOM 18 C4 C A 4 13.218 -13.207 -4.426 1.00 29.46 C
ATOM 19 N4 C A 4 12.288 -14.082 -4.081 1.00 28.50 N
ATOM 20 C5 C A 4 14.565 -13.330 -3.939 1.00 30.44 C
ATOM 21 C6 C A 4 15.459 -12.414 -4.316 1.00 30.86 C
ATOM 22 P G A 5 16.330 -7.872 -1.258 1.00 37.23 P
ATOM 23 OP1 G A 5 17.127 -6.687 -0.794 1.00 35.74 O
ATOM 24 OP2 G A 5 16.260 -9.098 -0.406 1.00 34.25 O
ATOM 25 O5' G A 5 14.830 -7.329 -1.537 1.00 34.53 O
TER
ATOM 1 O3' A B 2 17.727 -19.301 -2.777 1.00 37.93 O
ATOM 2 P A B 3 17.212 -17.953 -2.098 1.00 38.56 P
ATOM 3 OP1 A B 3 17.885 -17.742 -0.791 1.00 39.05 O
ATOM 4 OP2 A B 3 15.735 -17.917 -2.154 1.00 38.03 O
ATOM 5 O5' A B 3 17.807 -16.856 -3.108 1.00 37.30 O
ATOM 6 C5' A B 3 19.186 -16.847 -3.484 1.00 34.55 C
ATOM 7 C4' A B 3 19.415 -15.729 -4.480 1.00 34.21 C
ATOM 8 O4' A B 3 18.897 -16.099 -5.803 1.00 34.38 O
ATOM 9 C3' A B 3 18.712 -14.432 -4.108 1.00 34.06 C
ATOM 10 O3' A B 3 19.521 -13.672 -3.267 1.00 34.07 O
ATOM 11 C2' A B 3 18.581 -13.767 -5.462 1.00 35.02 C
ATOM 12 O2' A B 3 19.798 -13.160 -5.862 1.00 35.85 O
ATOM 13 C1' A B 3 18.214 -14.972 -6.340 1.00 34.71 C
ATOM 14 N9 A B 3 16.755 -15.194 -6.364 1.00 34.36 N
ATOM 15 C8 A B 3 16.039 -16.164 -5.695 1.00 34.21 C
ATOM 16 N7 A B 3 14.741 -16.118 -5.909 1.00 33.91 N
ATOM 17 C5 A B 3 14.599 -15.051 -6.790 1.00 33.02 C
ATOM 18 C6 A B 3 13.466 -14.486 -7.403 1.00 32.28 C
ATOM 19 N6 A B 3 12.251 -14.962 -7.167 1.00 31.70 N
ATOM 20 N1 A B 3 13.617 -13.424 -8.231 1.00 32.78 N
ATOM 21 C2 A B 3 14.865 -12.960 -8.410 1.00 33.45 C
ATOM 22 N3 A B 3 16.018 -13.408 -7.882 1.00 33.55 N
ATOM 23 C4 A B 3 15.818 -14.467 -7.074 1.00 33.18 C
ATOM 24 P C B 4 18.953 -12.895 -1.970 1.00 36.57 P
ATOM 25 OP1 C B 4 20.128 -12.247 -1.299 1.00 34.46 O
ATOM 26 OP2 C B 4 18.073 -13.836 -1.214 1.00 35.81 O
ATOM 27 O5' C B 4 18.060 -11.741 -2.625 1.00 34.57 O
TER
Atoms:
C2: (13.740,-11.314,-5.621)
OP1: (20.128,-12.247,-1.299)
OP2: (18.073,-13.836,-1.214)
C4: (13.218,-13.207,-4.426)
O5': (18.060,-11.741,-2.625)
C3': (16.589,-9.426,-3.485)
C1': (16.031,-10.363,-5.575)
O4': (17.381,-10.753,-5.340)
C5': (18.757,-10.711,-3.306)
P: (18.953,-12.895,-1.970)
O2: (13.439,-10.399,-6.393)
C4': (17.836,-9.932,-4.218)
C2': (15.735,-9.116,-4.705)
O2': (16.084,-7.880,-5.327)
N1: (15.068,-11.411,-5.156)
N3: (12.824,-12.238,-5.241)
N4: (12.288,-14.082,-4.081)
C6: (15.459,-12.414,-4.316)
C5: (14.565,-13.330,-3.939)
O3': (16.930,-8.272,-2.704)
OP1: (20.128,-12.247,-1.299)
OP2: (18.073,-13.836,-1.214)
C4: (13.218,-13.207,-4.426)
O5': (18.060,-11.741,-2.625)
C3': (16.589,-9.426,-3.485)
C1': (16.031,-10.363,-5.575)
O4': (17.381,-10.753,-5.340)
C5': (18.757,-10.711,-3.306)
P: (18.953,-12.895,-1.970)
O2: (13.439,-10.399,-6.393)
C4': (17.836,-9.932,-4.218)
C2': (15.735,-9.116,-4.705)
O2': (16.084,-7.880,-5.327)
N1: (15.068,-11.411,-5.156)
N3: (12.824,-12.238,-5.241)
N4: (12.288,-14.082,-4.081)
C6: (15.459,-12.414,-4.316)
C5: (14.565,-13.330,-3.939)
O3': (16.930,-8.272,-2.704)
OP1: (17.885,-17.742,-0.791)
OP2: (15.735,-17.917,-2.154)
C3': (18.712,-14.432,-4.108)
C1': (18.214,-14.972,-6.340)
C5': (19.186,-16.847,-3.484)
O4': (18.897,-16.099,-5.803)
C8: (16.039,-16.164,-5.695)
O2': (19.798,-13.160,-5.862)
C6: (13.466,-14.486,-7.403)
C5: (14.599,-15.051,-6.790)
C4: (15.818,-14.467,-7.074)
P: (17.212,-17.953,-2.098)
C4': (19.415,-15.729,-4.480)
C2': (18.581,-13.767,-5.462)
C2: (14.865,-12.960,-8.410)
N1: (13.617,-13.424,-8.231)
N3: (16.018,-13.408,-7.882)
N6: (12.251,-14.962,-7.167)
N7: (14.741,-16.118,-5.909)
N9: (16.755,-15.194,-6.364)
O5': (17.807,-16.856,-3.108)
O3': (19.521,-13.672,-3.267)
OP2: (15.735,-17.917,-2.154)
C3': (18.712,-14.432,-4.108)
C1': (18.214,-14.972,-6.340)
C5': (19.186,-16.847,-3.484)
O4': (18.897,-16.099,-5.803)
C8: (16.039,-16.164,-5.695)
O2': (19.798,-13.160,-5.862)
C6: (13.466,-14.486,-7.403)
C5: (14.599,-15.051,-6.790)
C4: (15.818,-14.467,-7.074)
P: (17.212,-17.953,-2.098)
C4': (19.415,-15.729,-4.480)
C2': (18.581,-13.767,-5.462)
C2: (14.865,-12.960,-8.410)
N1: (13.617,-13.424,-8.231)
N3: (16.018,-13.408,-7.882)
N6: (12.251,-14.962,-7.167)
N7: (14.741,-16.118,-5.909)
N9: (16.755,-15.194,-6.364)
O5': (17.807,-16.856,-3.108)
O3': (19.521,-13.672,-3.267)
Image (generated by PyMOL):