Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1231:A1230
Extra
PDB:
ATOM 1 O3' A A1230 19.386 87.143 74.023 1.00 47.40 O
ATOM 2 P C A1231 18.568 86.810 72.702 1.00 48.90 P
ATOM 3 OP1 C A1231 19.545 86.200 71.774 1.00 49.20 O
ATOM 4 OP2 C A1231 17.816 88.022 72.290 1.00 46.64 O
ATOM 5 O5' C A1231 17.522 85.709 73.192 1.00 50.83 O
ATOM 6 C5' C A1231 17.988 84.443 73.691 1.00 53.23 C
ATOM 7 C4' C A1231 16.929 83.753 74.513 1.00 54.63 C
ATOM 8 O4' C A1231 16.499 84.591 75.621 1.00 54.30 O
ATOM 9 C3' C A1231 15.637 83.471 73.785 1.00 55.90 C
ATOM 10 O3' C A1231 15.707 82.382 72.882 1.00 56.43 O
ATOM 11 C2' C A1231 14.678 83.236 74.940 1.00 56.30 C
ATOM 12 O2' C A1231 14.851 81.963 75.553 1.00 56.33 O
ATOM 13 C1' C A1231 15.120 84.347 75.897 1.00 55.44 C
ATOM 14 N1 C A1231 14.363 85.608 75.694 1.00 54.48 N
ATOM 15 C2 C A1231 13.096 85.781 76.316 1.00 54.48 C
ATOM 16 O2 C A1231 12.648 84.881 77.044 1.00 56.29 O
ATOM 17 N3 C A1231 12.406 86.932 76.104 1.00 53.10 N
ATOM 18 C4 C A1231 12.925 87.886 75.320 1.00 53.66 C
ATOM 19 N4 C A1231 12.219 89.011 75.125 1.00 52.33 N
ATOM 20 C5 C A1231 14.200 87.737 74.693 1.00 54.58 C
ATOM 21 C6 C A1231 14.875 86.597 74.906 1.00 54.16 C
ATOM 22 P C A1232 14.705 82.356 71.641 1.00 57.03 P
ATOM 23 OP1 C A1232 15.081 81.256 70.736 1.00 56.95 O
ATOM 24 OP2 C A1232 14.639 83.742 71.122 1.00 57.36 O
ATOM 25 O5' C A1232 13.311 82.037 72.323 1.00 54.85 O
TER
ATOM 1 O3' U B1229 19.772 93.184 74.944 1.00 45.83 O
ATOM 2 P A B1230 19.035 92.244 73.867 1.00 46.68 P
ATOM 3 OP1 A B1230 19.933 92.095 72.703 1.00 46.81 O
ATOM 4 OP2 A B1230 17.652 92.766 73.672 1.00 45.57 O
ATOM 5 O5' A B1230 18.939 90.824 74.587 1.00 45.76 O
ATOM 6 C5' A B1230 20.135 90.102 74.960 1.00 46.54 C
ATOM 7 C4' A B1230 19.791 88.819 75.689 1.00 47.03 C
ATOM 8 O4' A B1230 19.192 89.118 76.970 1.00 47.76 O
ATOM 9 C3' A B1230 18.774 87.923 75.021 1.00 47.46 C
ATOM 10 O3' A B1230 19.386 87.143 74.023 1.00 47.40 O
ATOM 11 C2' A B1230 18.280 87.090 76.188 1.00 47.93 C
ATOM 12 O2' A B1230 19.259 86.146 76.573 1.00 48.24 O
ATOM 13 C1' A B1230 18.188 88.162 77.268 1.00 47.09 C
ATOM 14 N9 A B1230 16.904 88.868 77.282 1.00 46.99 N
ATOM 15 C8 A B1230 16.592 90.075 76.697 1.00 45.85 C
ATOM 16 N7 A B1230 15.372 90.476 76.940 1.00 45.31 N
ATOM 17 C5 A B1230 14.836 89.460 77.717 1.00 45.59 C
ATOM 18 C6 A B1230 13.575 89.283 78.302 1.00 45.78 C
ATOM 19 N6 A B1230 12.575 90.160 78.195 1.00 43.86 N
ATOM 20 N1 A B1230 13.368 88.154 79.017 1.00 46.59 N
ATOM 21 C2 A B1230 14.365 87.269 79.126 1.00 46.71 C
ATOM 22 N3 A B1230 15.590 87.322 78.620 1.00 47.25 N
ATOM 23 C4 A B1230 15.764 88.457 77.923 1.00 46.55 C
ATOM 24 P C B1231 18.568 86.810 72.702 1.00 48.90 P
ATOM 25 OP1 C B1231 19.545 86.200 71.774 1.00 49.20 O
ATOM 26 OP2 C B1231 17.816 88.022 72.290 1.00 46.64 O
ATOM 27 O5' C B1231 17.522 85.709 73.192 1.00 50.83 O
TER
ATOM 2 P C A1231 18.568 86.810 72.702 1.00 48.90 P
ATOM 3 OP1 C A1231 19.545 86.200 71.774 1.00 49.20 O
ATOM 4 OP2 C A1231 17.816 88.022 72.290 1.00 46.64 O
ATOM 5 O5' C A1231 17.522 85.709 73.192 1.00 50.83 O
ATOM 6 C5' C A1231 17.988 84.443 73.691 1.00 53.23 C
ATOM 7 C4' C A1231 16.929 83.753 74.513 1.00 54.63 C
ATOM 8 O4' C A1231 16.499 84.591 75.621 1.00 54.30 O
ATOM 9 C3' C A1231 15.637 83.471 73.785 1.00 55.90 C
ATOM 10 O3' C A1231 15.707 82.382 72.882 1.00 56.43 O
ATOM 11 C2' C A1231 14.678 83.236 74.940 1.00 56.30 C
ATOM 12 O2' C A1231 14.851 81.963 75.553 1.00 56.33 O
ATOM 13 C1' C A1231 15.120 84.347 75.897 1.00 55.44 C
ATOM 14 N1 C A1231 14.363 85.608 75.694 1.00 54.48 N
ATOM 15 C2 C A1231 13.096 85.781 76.316 1.00 54.48 C
ATOM 16 O2 C A1231 12.648 84.881 77.044 1.00 56.29 O
ATOM 17 N3 C A1231 12.406 86.932 76.104 1.00 53.10 N
ATOM 18 C4 C A1231 12.925 87.886 75.320 1.00 53.66 C
ATOM 19 N4 C A1231 12.219 89.011 75.125 1.00 52.33 N
ATOM 20 C5 C A1231 14.200 87.737 74.693 1.00 54.58 C
ATOM 21 C6 C A1231 14.875 86.597 74.906 1.00 54.16 C
ATOM 22 P C A1232 14.705 82.356 71.641 1.00 57.03 P
ATOM 23 OP1 C A1232 15.081 81.256 70.736 1.00 56.95 O
ATOM 24 OP2 C A1232 14.639 83.742 71.122 1.00 57.36 O
ATOM 25 O5' C A1232 13.311 82.037 72.323 1.00 54.85 O
TER
ATOM 1 O3' U B1229 19.772 93.184 74.944 1.00 45.83 O
ATOM 2 P A B1230 19.035 92.244 73.867 1.00 46.68 P
ATOM 3 OP1 A B1230 19.933 92.095 72.703 1.00 46.81 O
ATOM 4 OP2 A B1230 17.652 92.766 73.672 1.00 45.57 O
ATOM 5 O5' A B1230 18.939 90.824 74.587 1.00 45.76 O
ATOM 6 C5' A B1230 20.135 90.102 74.960 1.00 46.54 C
ATOM 7 C4' A B1230 19.791 88.819 75.689 1.00 47.03 C
ATOM 8 O4' A B1230 19.192 89.118 76.970 1.00 47.76 O
ATOM 9 C3' A B1230 18.774 87.923 75.021 1.00 47.46 C
ATOM 10 O3' A B1230 19.386 87.143 74.023 1.00 47.40 O
ATOM 11 C2' A B1230 18.280 87.090 76.188 1.00 47.93 C
ATOM 12 O2' A B1230 19.259 86.146 76.573 1.00 48.24 O
ATOM 13 C1' A B1230 18.188 88.162 77.268 1.00 47.09 C
ATOM 14 N9 A B1230 16.904 88.868 77.282 1.00 46.99 N
ATOM 15 C8 A B1230 16.592 90.075 76.697 1.00 45.85 C
ATOM 16 N7 A B1230 15.372 90.476 76.940 1.00 45.31 N
ATOM 17 C5 A B1230 14.836 89.460 77.717 1.00 45.59 C
ATOM 18 C6 A B1230 13.575 89.283 78.302 1.00 45.78 C
ATOM 19 N6 A B1230 12.575 90.160 78.195 1.00 43.86 N
ATOM 20 N1 A B1230 13.368 88.154 79.017 1.00 46.59 N
ATOM 21 C2 A B1230 14.365 87.269 79.126 1.00 46.71 C
ATOM 22 N3 A B1230 15.590 87.322 78.620 1.00 47.25 N
ATOM 23 C4 A B1230 15.764 88.457 77.923 1.00 46.55 C
ATOM 24 P C B1231 18.568 86.810 72.702 1.00 48.90 P
ATOM 25 OP1 C B1231 19.545 86.200 71.774 1.00 49.20 O
ATOM 26 OP2 C B1231 17.816 88.022 72.290 1.00 46.64 O
ATOM 27 O5' C B1231 17.522 85.709 73.192 1.00 50.83 O
TER
Atoms:
C2: (13.096,85.781,76.316)
OP1: (19.545,86.200,71.774)
OP2: (17.816,88.022,72.290)
C4: (12.925,87.886,75.320)
O5': (17.522,85.709,73.192)
C3': (15.637,83.471,73.785)
C1': (15.120,84.347,75.897)
O4': (16.499,84.591,75.621)
C5': (17.988,84.443,73.691)
P: (18.568,86.810,72.702)
O2: (12.648,84.881,77.044)
C4': (16.929,83.753,74.513)
C2': (14.678,83.236,74.940)
O2': (14.851,81.963,75.553)
N1: (14.363,85.608,75.694)
N3: (12.406,86.932,76.104)
N4: (12.219,89.011,75.125)
C6: (14.875,86.597,74.906)
C5: (14.200,87.737,74.693)
O3': (15.707,82.382,72.882)
OP1: (19.545,86.200,71.774)
OP2: (17.816,88.022,72.290)
C4: (12.925,87.886,75.320)
O5': (17.522,85.709,73.192)
C3': (15.637,83.471,73.785)
C1': (15.120,84.347,75.897)
O4': (16.499,84.591,75.621)
C5': (17.988,84.443,73.691)
P: (18.568,86.810,72.702)
O2: (12.648,84.881,77.044)
C4': (16.929,83.753,74.513)
C2': (14.678,83.236,74.940)
O2': (14.851,81.963,75.553)
N1: (14.363,85.608,75.694)
N3: (12.406,86.932,76.104)
N4: (12.219,89.011,75.125)
C6: (14.875,86.597,74.906)
C5: (14.200,87.737,74.693)
O3': (15.707,82.382,72.882)
OP1: (19.933,92.095,72.703)
OP2: (17.652,92.766,73.672)
C3': (18.774,87.923,75.021)
C1': (18.188,88.162,77.268)
C5': (20.135,90.102,74.960)
O4': (19.192,89.118,76.970)
C8: (16.592,90.075,76.697)
O2': (19.259,86.146,76.573)
C6: (13.575,89.283,78.302)
C5: (14.836,89.460,77.717)
C4: (15.764,88.457,77.923)
P: (19.035,92.244,73.867)
C4': (19.791,88.819,75.689)
C2': (18.280,87.090,76.188)
C2: (14.365,87.269,79.126)
N1: (13.368,88.154,79.017)
N3: (15.590,87.322,78.620)
N6: (12.575,90.160,78.195)
N7: (15.372,90.476,76.940)
N9: (16.904,88.868,77.282)
O5': (18.939,90.824,74.587)
O3': (19.386,87.143,74.023)
OP2: (17.652,92.766,73.672)
C3': (18.774,87.923,75.021)
C1': (18.188,88.162,77.268)
C5': (20.135,90.102,74.960)
O4': (19.192,89.118,76.970)
C8: (16.592,90.075,76.697)
O2': (19.259,86.146,76.573)
C6: (13.575,89.283,78.302)
C5: (14.836,89.460,77.717)
C4: (15.764,88.457,77.923)
P: (19.035,92.244,73.867)
C4': (19.791,88.819,75.689)
C2': (18.280,87.090,76.188)
C2: (14.365,87.269,79.126)
N1: (13.368,88.154,79.017)
N3: (15.590,87.322,78.620)
N6: (12.575,90.160,78.195)
N7: (15.372,90.476,76.940)
N9: (16.904,88.868,77.282)
O5': (18.939,90.824,74.587)
O3': (19.386,87.143,74.023)
Image (generated by PyMOL):