ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:01018:02017

Extra

PDB:
ATOM 1 O3' A A1017 54.640 97.836 109.970 1.00 46.64 O
ATOM 2 P G A1018 53.384 96.926 110.413 1.00 47.54 P
ATOM 3 OP1 G A1018 52.963 97.413 111.760 1.00 45.86 O
ATOM 4 OP2 G A1018 53.680 95.477 110.197 1.00 45.18 O
ATOM 5 O5' G A1018 52.247 97.309 109.371 1.00 49.08 O
ATOM 6 C5' G A1018 51.725 98.637 109.307 1.00 46.14 C
ATOM 7 C4' G A1018 51.751 99.120 107.886 1.00 45.59 C
ATOM 8 O4' G A1018 51.141 100.435 107.831 1.00 44.84 O
ATOM 9 C3' G A1018 53.157 99.281 107.313 1.00 46.87 C
ATOM 10 O3' G A1018 53.128 99.093 105.887 1.00 47.22 O
ATOM 11 C2' G A1018 53.459 100.734 107.648 1.00 45.22 C
ATOM 12 O2' G A1018 54.460 101.230 106.796 1.00 50.27 O
ATOM 13 C1' G A1018 52.093 101.376 107.387 1.00 43.11 C
ATOM 14 N9 G A1018 51.788 102.655 108.024 1.00 40.29 N
ATOM 15 C8 G A1018 52.445 103.264 109.064 1.00 40.36 C
ATOM 16 N7 G A1018 51.923 104.417 109.395 1.00 39.44 N
ATOM 17 C5 G A1018 50.862 104.580 108.519 1.00 36.15 C
ATOM 18 C6 G A1018 49.949 105.646 108.382 1.00 36.15 C
ATOM 19 O6 G A1018 49.896 106.697 109.021 1.00 36.54 O
ATOM 20 N1 G A1018 49.031 105.408 107.368 1.00 38.05 N
ATOM 21 C2 G A1018 48.998 104.287 106.579 1.00 39.77 C
ATOM 22 N2 G A1018 48.026 104.242 105.652 1.00 39.83 N
ATOM 23 N3 G A1018 49.853 103.287 106.691 1.00 38.63 N
ATOM 24 C4 G A1018 50.755 103.501 107.673 1.00 38.46 C
ATOM 25 P C A1019 54.084 97.996 105.188 1.00 46.34 P
ATOM 26 OP1 C A1019 53.732 97.944 103.744 1.00 48.84 O
ATOM 27 OP2 C A1019 54.069 96.746 105.982 1.00 48.03 O
ATOM 28 O5' C A1019 55.534 98.648 105.250 1.00 47.15 O
TER

ATOM 1 O3' G B2016 43.995 107.512 104.102 1.00 45.42 O
ATOM 2 P C B2017 45.281 106.570 103.906 1.00 45.27 P
ATOM 3 OP1 C B2017 44.805 105.516 102.990 1.00 43.83 O
ATOM 4 OP2 C B2017 45.843 106.182 105.234 1.00 48.36 O
ATOM 5 O5' C B2017 46.331 107.517 103.163 1.00 45.59 O
ATOM 6 C5' C B2017 47.734 107.213 103.151 1.00 46.52 C
ATOM 7 C4' C B2017 48.473 108.135 102.197 1.00 51.06 C
ATOM 8 O4' C B2017 48.273 107.754 100.817 1.00 49.40 O
ATOM 9 C3' C B2017 48.056 109.597 102.180 1.00 52.74 C
ATOM 10 O3' C B2017 48.688 110.276 103.259 1.00 57.85 O
ATOM 11 C2' C B2017 48.686 110.097 100.875 1.00 52.33 C
ATOM 12 O2' C B2017 50.026 110.516 101.058 1.00 54.06 O
ATOM 13 C1' C B2017 48.698 108.831 100.006 1.00 49.69 C
ATOM 14 N1 C B2017 47.910 108.857 98.762 1.00 48.63 N
ATOM 15 C2 C B2017 48.564 108.579 97.538 1.00 47.47 C
ATOM 16 O2 C B2017 49.785 108.373 97.533 1.00 46.22 O
ATOM 17 N3 C B2017 47.843 108.546 96.398 1.00 46.33 N
ATOM 18 C4 C B2017 46.532 108.781 96.432 1.00 46.66 C
ATOM 19 N4 C B2017 45.859 108.694 95.285 1.00 45.23 N
ATOM 20 C5 C B2017 45.850 109.103 97.647 1.00 46.78 C
ATOM 21 C6 C B2017 46.569 109.129 98.777 1.00 47.37 C
ATOM 22 P G B2018 47.841 110.746 104.542 1.00 60.26 P
ATOM 23 OP1 G B2018 46.960 109.630 105.005 1.00 61.55 O
ATOM 24 OP2 G B2018 47.254 112.081 104.252 1.00 60.07 O
ATOM 25 O5' G B2018 48.981 110.960 105.617 1.00 55.72 O
TER

Atoms:
OP1: (52.963,97.413,111.760)
OP2: (53.680,95.477,110.197)
C3': (53.157,99.281,107.313)
C1': (52.093,101.376,107.387)
C5': (51.725,98.637,109.307)
O6: (49.896,106.697,109.021)
O4': (51.141,100.435,107.831)
C8: (52.445,103.264,109.064)
C2: (48.998,104.287,106.579)
C6: (49.949,105.646,108.382)
C5: (50.862,104.580,108.519)
C4: (50.755,103.501,107.673)
P: (53.384,96.926,110.413)
C4': (51.751,99.120,107.886)
C2': (53.459,100.734,107.648)
O2': (54.460,101.230,106.796)
N1: (49.031,105.408,107.368)
N2: (48.026,104.242,105.652)
N3: (49.853,103.287,106.691)
N7: (51.923,104.417,109.395)
N9: (51.788,102.655,108.024)
O5': (52.247,97.309,109.371)
O3': (53.128,99.093,105.887)
C2: (48.564,108.579,97.538)
OP1: (44.805,105.516,102.990)
OP2: (45.843,106.182,105.234)
C4: (46.532,108.781,96.432)
O5': (46.331,107.517,103.163)
C3': (48.056,109.597,102.180)
C1': (48.698,108.831,100.006)
O4': (48.273,107.754,100.817)
C5': (47.734,107.213,103.151)
P: (45.281,106.570,103.906)
O2: (49.785,108.373,97.533)
C4': (48.473,108.135,102.197)
C2': (48.686,110.097,100.875)
O2': (50.026,110.516,101.058)
N1: (47.910,108.857,98.762)
N3: (47.843,108.546,96.398)
N4: (45.859,108.694,95.285)
C6: (46.569,109.129,98.777)
C5: (45.850,109.103,97.647)
O3': (48.688,110.276,103.259)
Image (generated by PyMOL):
PyMOL image
show in jmol