Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:52041:52040
Extra
PDB:
ATOM 1 O3' A A2040 184.059 -55.825 207.394 1.00 71.13 O
ATOM 2 P C A2041 184.471 -54.338 207.829 1.00 75.60 P
ATOM 3 OP1 C A2041 185.805 -54.428 208.469 1.00 75.66 O
ATOM 4 OP2 C A2041 183.343 -53.764 208.621 1.00 75.01 O
ATOM 5 O5' C A2041 184.582 -53.606 206.423 1.00 75.77 O
ATOM 6 C5' C A2041 185.139 -54.286 205.314 1.00 76.41 C
ATOM 7 C4' C A2041 184.628 -53.745 204.002 1.00 76.54 C
ATOM 8 O4' C A2041 183.262 -54.180 203.769 1.00 76.54 O
ATOM 9 C3' C A2041 184.562 -52.239 203.881 1.00 76.07 C
ATOM 10 O3' C A2041 185.827 -51.659 203.604 1.00 76.16 O
ATOM 11 C2' C A2041 183.534 -52.049 202.769 1.00 76.18 C
ATOM 12 O2' C A2041 184.120 -52.274 201.494 1.00 76.74 O
ATOM 13 C1' C A2041 182.557 -53.189 203.062 1.00 76.32 C
ATOM 14 N1 C A2041 181.443 -52.755 203.898 1.00 75.76 N
ATOM 15 C2 C A2041 180.336 -52.129 203.338 1.00 75.57 C
ATOM 16 O2 C A2041 180.289 -51.918 202.099 1.00 75.87 O
ATOM 17 N3 C A2041 179.351 -51.763 204.198 1.00 75.05 N
ATOM 18 C4 C A2041 179.443 -52.020 205.509 1.00 74.76 C
ATOM 19 N4 C A2041 178.450 -51.660 206.327 1.00 74.28 N
ATOM 20 C5 C A2041 180.565 -52.673 206.066 1.00 74.97 C
ATOM 21 C6 C A2041 181.522 -53.017 205.227 1.00 75.46 C
ATOM 22 P C A2042 186.299 -50.359 204.397 1.00 83.57 P
ATOM 23 OP1 C A2042 187.538 -49.888 203.745 1.00 83.82 O
ATOM 24 OP2 C A2042 186.342 -50.717 205.836 1.00 83.27 O
ATOM 25 O5' C A2042 185.094 -49.328 204.129 1.00 83.13 O
TER
ATOM 1 O3' A B2039 178.699 -57.898 211.181 1.00 76.56 O
ATOM 2 P A B2040 179.818 -56.767 211.002 1.00 69.86 P
ATOM 3 OP1 A B2040 180.405 -56.475 212.353 1.00 69.49 O
ATOM 4 OP2 A B2040 179.197 -55.644 210.251 1.00 69.59 O
ATOM 5 O5' A B2040 180.876 -57.536 210.092 1.00 70.51 O
ATOM 6 C5' A B2040 182.029 -56.897 209.602 1.00 70.59 C
ATOM 7 C4' A B2040 182.271 -57.281 208.179 1.00 71.14 C
ATOM 8 O4' A B2040 181.033 -57.738 207.591 1.00 71.29 O
ATOM 9 C3' A B2040 182.695 -56.155 207.271 1.00 71.07 C
ATOM 10 O3' A B2040 184.059 -55.825 207.394 1.00 71.13 O
ATOM 11 C2' A B2040 182.283 -56.667 205.902 1.00 71.58 C
ATOM 12 O2' A B2040 183.162 -57.682 205.462 1.00 72.19 O
ATOM 13 C1' A B2040 180.961 -57.318 206.249 1.00 71.52 C
ATOM 14 N9 A B2040 179.843 -56.386 206.129 1.00 71.07 N
ATOM 15 C8 A B2040 179.070 -55.870 207.128 1.00 70.50 C
ATOM 16 N7 A B2040 178.118 -55.091 206.670 1.00 70.24 N
ATOM 17 C5 A B2040 178.287 -55.128 205.288 1.00 70.68 C
ATOM 18 C6 A B2040 177.611 -54.534 204.219 1.00 70.70 C
ATOM 19 N6 A B2040 176.561 -53.731 204.358 1.00 70.26 N
ATOM 20 N1 A B2040 178.057 -54.785 202.976 1.00 71.22 N
ATOM 21 C2 A B2040 179.098 -55.580 202.825 1.00 71.68 C
ATOM 22 N3 A B2040 179.811 -56.193 203.745 1.00 71.70 N
ATOM 23 C4 A B2040 179.348 -55.922 204.955 1.00 71.19 C
ATOM 24 P C B2041 184.471 -54.338 207.829 1.00 75.60 P
ATOM 25 OP1 C B2041 185.805 -54.428 208.469 1.00 75.66 O
ATOM 26 OP2 C B2041 183.343 -53.764 208.621 1.00 75.01 O
ATOM 27 O5' C B2041 184.582 -53.606 206.423 1.00 75.77 O
TER
ATOM 2 P C A2041 184.471 -54.338 207.829 1.00 75.60 P
ATOM 3 OP1 C A2041 185.805 -54.428 208.469 1.00 75.66 O
ATOM 4 OP2 C A2041 183.343 -53.764 208.621 1.00 75.01 O
ATOM 5 O5' C A2041 184.582 -53.606 206.423 1.00 75.77 O
ATOM 6 C5' C A2041 185.139 -54.286 205.314 1.00 76.41 C
ATOM 7 C4' C A2041 184.628 -53.745 204.002 1.00 76.54 C
ATOM 8 O4' C A2041 183.262 -54.180 203.769 1.00 76.54 O
ATOM 9 C3' C A2041 184.562 -52.239 203.881 1.00 76.07 C
ATOM 10 O3' C A2041 185.827 -51.659 203.604 1.00 76.16 O
ATOM 11 C2' C A2041 183.534 -52.049 202.769 1.00 76.18 C
ATOM 12 O2' C A2041 184.120 -52.274 201.494 1.00 76.74 O
ATOM 13 C1' C A2041 182.557 -53.189 203.062 1.00 76.32 C
ATOM 14 N1 C A2041 181.443 -52.755 203.898 1.00 75.76 N
ATOM 15 C2 C A2041 180.336 -52.129 203.338 1.00 75.57 C
ATOM 16 O2 C A2041 180.289 -51.918 202.099 1.00 75.87 O
ATOM 17 N3 C A2041 179.351 -51.763 204.198 1.00 75.05 N
ATOM 18 C4 C A2041 179.443 -52.020 205.509 1.00 74.76 C
ATOM 19 N4 C A2041 178.450 -51.660 206.327 1.00 74.28 N
ATOM 20 C5 C A2041 180.565 -52.673 206.066 1.00 74.97 C
ATOM 21 C6 C A2041 181.522 -53.017 205.227 1.00 75.46 C
ATOM 22 P C A2042 186.299 -50.359 204.397 1.00 83.57 P
ATOM 23 OP1 C A2042 187.538 -49.888 203.745 1.00 83.82 O
ATOM 24 OP2 C A2042 186.342 -50.717 205.836 1.00 83.27 O
ATOM 25 O5' C A2042 185.094 -49.328 204.129 1.00 83.13 O
TER
ATOM 1 O3' A B2039 178.699 -57.898 211.181 1.00 76.56 O
ATOM 2 P A B2040 179.818 -56.767 211.002 1.00 69.86 P
ATOM 3 OP1 A B2040 180.405 -56.475 212.353 1.00 69.49 O
ATOM 4 OP2 A B2040 179.197 -55.644 210.251 1.00 69.59 O
ATOM 5 O5' A B2040 180.876 -57.536 210.092 1.00 70.51 O
ATOM 6 C5' A B2040 182.029 -56.897 209.602 1.00 70.59 C
ATOM 7 C4' A B2040 182.271 -57.281 208.179 1.00 71.14 C
ATOM 8 O4' A B2040 181.033 -57.738 207.591 1.00 71.29 O
ATOM 9 C3' A B2040 182.695 -56.155 207.271 1.00 71.07 C
ATOM 10 O3' A B2040 184.059 -55.825 207.394 1.00 71.13 O
ATOM 11 C2' A B2040 182.283 -56.667 205.902 1.00 71.58 C
ATOM 12 O2' A B2040 183.162 -57.682 205.462 1.00 72.19 O
ATOM 13 C1' A B2040 180.961 -57.318 206.249 1.00 71.52 C
ATOM 14 N9 A B2040 179.843 -56.386 206.129 1.00 71.07 N
ATOM 15 C8 A B2040 179.070 -55.870 207.128 1.00 70.50 C
ATOM 16 N7 A B2040 178.118 -55.091 206.670 1.00 70.24 N
ATOM 17 C5 A B2040 178.287 -55.128 205.288 1.00 70.68 C
ATOM 18 C6 A B2040 177.611 -54.534 204.219 1.00 70.70 C
ATOM 19 N6 A B2040 176.561 -53.731 204.358 1.00 70.26 N
ATOM 20 N1 A B2040 178.057 -54.785 202.976 1.00 71.22 N
ATOM 21 C2 A B2040 179.098 -55.580 202.825 1.00 71.68 C
ATOM 22 N3 A B2040 179.811 -56.193 203.745 1.00 71.70 N
ATOM 23 C4 A B2040 179.348 -55.922 204.955 1.00 71.19 C
ATOM 24 P C B2041 184.471 -54.338 207.829 1.00 75.60 P
ATOM 25 OP1 C B2041 185.805 -54.428 208.469 1.00 75.66 O
ATOM 26 OP2 C B2041 183.343 -53.764 208.621 1.00 75.01 O
ATOM 27 O5' C B2041 184.582 -53.606 206.423 1.00 75.77 O
TER
Atoms:
C2: (180.336,-52.129,203.338)
OP1: (185.805,-54.428,208.469)
OP2: (183.343,-53.764,208.621)
C4: (179.443,-52.020,205.509)
O5': (184.582,-53.606,206.423)
C3': (184.562,-52.239,203.881)
C1': (182.557,-53.189,203.062)
O4': (183.262,-54.180,203.769)
C5': (185.139,-54.286,205.314)
P: (184.471,-54.338,207.829)
O2: (180.289,-51.918,202.099)
C4': (184.628,-53.745,204.002)
C2': (183.534,-52.049,202.769)
O2': (184.120,-52.274,201.494)
N1: (181.443,-52.755,203.898)
N3: (179.351,-51.763,204.198)
N4: (178.450,-51.660,206.327)
C6: (181.522,-53.017,205.227)
C5: (180.565,-52.673,206.066)
O3': (185.827,-51.659,203.604)
OP1: (185.805,-54.428,208.469)
OP2: (183.343,-53.764,208.621)
C4: (179.443,-52.020,205.509)
O5': (184.582,-53.606,206.423)
C3': (184.562,-52.239,203.881)
C1': (182.557,-53.189,203.062)
O4': (183.262,-54.180,203.769)
C5': (185.139,-54.286,205.314)
P: (184.471,-54.338,207.829)
O2: (180.289,-51.918,202.099)
C4': (184.628,-53.745,204.002)
C2': (183.534,-52.049,202.769)
O2': (184.120,-52.274,201.494)
N1: (181.443,-52.755,203.898)
N3: (179.351,-51.763,204.198)
N4: (178.450,-51.660,206.327)
C6: (181.522,-53.017,205.227)
C5: (180.565,-52.673,206.066)
O3': (185.827,-51.659,203.604)
OP1: (180.405,-56.475,212.353)
OP2: (179.197,-55.644,210.251)
C3': (182.695,-56.155,207.271)
C1': (180.961,-57.318,206.249)
C5': (182.029,-56.897,209.602)
O4': (181.033,-57.738,207.591)
C8: (179.070,-55.870,207.128)
O2': (183.162,-57.682,205.462)
C6: (177.611,-54.534,204.219)
C5: (178.287,-55.128,205.288)
C4: (179.348,-55.922,204.955)
P: (179.818,-56.767,211.002)
C4': (182.271,-57.281,208.179)
C2': (182.283,-56.667,205.902)
C2: (179.098,-55.580,202.825)
N1: (178.057,-54.785,202.976)
N3: (179.811,-56.193,203.745)
N6: (176.561,-53.731,204.358)
N7: (178.118,-55.091,206.670)
N9: (179.843,-56.386,206.129)
O5': (180.876,-57.536,210.092)
O3': (184.059,-55.825,207.394)
OP2: (179.197,-55.644,210.251)
C3': (182.695,-56.155,207.271)
C1': (180.961,-57.318,206.249)
C5': (182.029,-56.897,209.602)
O4': (181.033,-57.738,207.591)
C8: (179.070,-55.870,207.128)
O2': (183.162,-57.682,205.462)
C6: (177.611,-54.534,204.219)
C5: (178.287,-55.128,205.288)
C4: (179.348,-55.922,204.955)
P: (179.818,-56.767,211.002)
C4': (182.271,-57.281,208.179)
C2': (182.283,-56.667,205.902)
C2: (179.098,-55.580,202.825)
N1: (178.057,-54.785,202.976)
N3: (179.811,-56.193,203.745)
N6: (176.561,-53.731,204.358)
N7: (178.118,-55.091,206.670)
N9: (179.843,-56.386,206.129)
O5': (180.876,-57.536,210.092)
O3': (184.059,-55.825,207.394)
Image (generated by PyMOL):